RNA–Protein interactions for RNA: ENST00000477763.1

SMNDC1-205, Transcript of survival motor neuron domain containing 1, humanhuman

TSL 2

Gene SMNDC1, Length 778 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-205ENST00000477763 INPP5BP32019 993 aa8.42□□□□□ -1.06
SMNDC1-205ENST00000477763 AVENQ9NQS1 362 aaPredicted RBP8.42□□□□□ -1.06
SMNDC1-205ENST00000477763 STRN4Q9NRL3 753 aa8.42□□□□□ -1.06
SMNDC1-205ENST00000477763 KCNH4Q9UQ05 1017 aa8.42□□□□□ -1.06
SMNDC1-205ENST00000477763 C2CD2LO14523 706 aa8.41□□□□□ -1.06
SMNDC1-205ENST00000477763 BRD1O95696 1058 aa8.41□□□□□ -1.06
SMNDC1-205ENST00000477763 SCNN1AP37088 669 aa8.41□□□□□ -1.06
SMNDC1-205ENST00000477763 IDH3AP50213 366 aa8.41□□□□□ -1.06
SMNDC1-205ENST00000477763 ARSDP51689 593 aa8.41□□□□□ -1.06
SMNDC1-205ENST00000477763 SFSWAPQ12872 951 aaKnown RBP8.41□□□□□ -1.06
SMNDC1-205ENST00000477763 TMEM151AQ8N4L1 468 aa8.41□□□□□ -1.06
SMNDC1-205ENST00000477763 SVOPQ8N4V2 548 aa8.41□□□□□ -1.06
SMNDC1-205ENST00000477763 ABTB2Q8N961 1025 aa8.41□□□□□ -1.06
SMNDC1-205ENST00000477763 GTF3C2Q8WUA4 911 aaPredicted RBP8.41□□□□□ -1.06
SMNDC1-205ENST00000477763 EFCC1Q9HA90 598 aa8.41□□□□□ -1.06
SMNDC1-205ENST00000477763 LRRC4BQ9NT99 713 aa8.41□□□□□ -1.06
SMNDC1-205ENST00000477763 GDF11O95390 407 aa8.4□□□□□ -1.06
SMNDC1-205ENST00000477763 ARAFP10398 606 aa8.4□□□□□ -1.06
SMNDC1-205ENST00000477763 TREML1Q86YW5 311 aa8.4□□□□□ -1.06
SMNDC1-205ENST00000477763 ETFBKMTQ8IXQ9 262 aa8.4□□□□□ -1.06
SMNDC1-205ENST00000477763 OPLAHO14841 1288 aa8.39□□□□□ -1.07
SMNDC1-205ENST00000477763 SF3B2Q13435 895 aaKnown RBP8.39□□□□□ -1.07
SMNDC1-205ENST00000477763 ZNF468Q5VIY5 522 aaPredicted RBP8.39□□□□□ -1.07
SMNDC1-205ENST00000477763 OXCT2Q9BYC2 517 aaPredicted RBP8.39□□□□□ -1.07
SMNDC1-205ENST00000477763 FAM13BQ9NYF5 915 aa8.39□□□□□ -1.07
SMNDC1-205ENST00000477763 EGFL7Q9UHF1 273 aa8.39□□□□□ -1.07
SMNDC1-205ENST00000477763 GDF2Q9UK05 429 aaPredicted RBP8.39□□□□□ -1.07
SMNDC1-205ENST00000477763 NPR3P17342 541 aa8.38□□□□□ -1.07
SMNDC1-205ENST00000477763 SPEM2Q0P670 501 aa8.38□□□□□ -1.07
SMNDC1-205ENST00000477763 SUZ12Q15022 739 aaKnown RBP8.38□□□□□ -1.07
SMNDC1-205ENST00000477763 LYPD4Q6UWN0 246 aa8.38□□□□□ -1.07
SMNDC1-205ENST00000477763 TXNDC2Q86VQ3 553 aa8.38□□□□□ -1.07
SMNDC1-205ENST00000477763 GOLGA6L1Q8N7Z2 621 aa8.38□□□□□ -1.07
SMNDC1-205ENST00000477763 ACDQ96AP0 544 aa8.38□□□□□ -1.07
SMNDC1-205ENST00000477763 DNMT3AQ9Y6K1 912 aaPredicted RBP8.38□□□□□ -1.07
SMNDC1-205ENST00000477763 NEUROD1Q13562 356 aa8.37□□□□□ -1.07
SMNDC1-205ENST00000477763 FAM26DQ5JW98 314 aa8.37□□□□□ -1.07
SMNDC1-205ENST00000477763 PRR12Q9ULL5 1215 aa8.37□□□□□ -1.07
SMNDC1-205ENST00000477763 ZBTB7CA1YPR0 619 aa8.36□□□□□ -1.07
SMNDC1-205ENST00000477763 ADH6P28332 368 aa8.36□□□□□ -1.07
SMNDC1-205ENST00000477763 GRNP28799 593 aaKnown RBP8.36□□□□□ -1.07
SMNDC1-205ENST00000477763 FKBP4Q02790 459 aaKnown RBP eCLIP8.36□□□□□ -1.07
SMNDC1-205ENST00000477763 SLCO4C1Q6ZQN7 724 aa8.36□□□□□ -1.07
SMNDC1-205ENST00000477763 CCER1Q8TC90 406 aaPredicted RBP8.36□□□□□ -1.07
SMNDC1-205ENST00000477763 SLC30A3Q99726 388 aa8.36□□□□□ -1.07
SMNDC1-205ENST00000477763 GNEQ9Y223 722 aaKnown RBP8.36□□□□□ -1.07
SMNDC1-205ENST00000477763 RTCBQ9Y3I0 505 aaKnown RBP8.36□□□□□ -1.07
SMNDC1-205ENST00000477763 RNF225M0QZC1 329 aaPredicted RBP8.35□□□□□ -1.07
SMNDC1-205ENST00000477763 EGFRP00533 1210 aa8.35□□□□□ -1.07
SMNDC1-205ENST00000477763 CELA2BP08218 269 aaPredicted RBP8.35□□□□□ -1.07
SMNDC1-205ENST00000477763 BCRP11274 1271 aa8.35□□□□□ -1.07
SMNDC1-205ENST00000477763 ZAP70P43403 619 aa8.35□□□□□ -1.07
SMNDC1-205ENST00000477763 CCINQ13939 588 aa8.35□□□□□ -1.07
SMNDC1-205ENST00000477763 ALKBH2Q6NS38 261 aa8.35□□□□□ -1.07
SMNDC1-205ENST00000477763 GSX2Q9BZM3 304 aa8.35□□□□□ -1.07
SMNDC1-205ENST00000477763 ZBTB39O15060 712 aa8.34□□□□□ -1.07
SMNDC1-205ENST00000477763 OIP5O43482 229 aa8.34□□□□□ -1.07
SMNDC1-205ENST00000477763 SIN3BO75182 1162 aa8.34□□□□□ -1.07
SMNDC1-205ENST00000477763 FAM13AO94988 1023 aa8.34□□□□□ -1.07
SMNDC1-205ENST00000477763 ABL1P00519 1130 aa8.34□□□□□ -1.07
SMNDC1-205ENST00000477763 IRS1P35568 1242 aa8.34□□□□□ -1.07
SMNDC1-205ENST00000477763 GRIN2CQ14957 1233 aa8.34□□□□□ -1.07
SMNDC1-205ENST00000477763 NOM1Q5C9Z4 860 aaKnown RBP8.34□□□□□ -1.07
SMNDC1-205ENST00000477763 PIK3R5Q8WYR1 880 aa8.34□□□□□ -1.07
SMNDC1-205ENST00000477763 GGA1Q9UJY5 639 aa8.34□□□□□ -1.07
SMNDC1-205ENST00000477763 PATL2C9JE40 543 aaKnown RBP8.33□□□□□ -1.08
SMNDC1-205ENST00000477763 ICMTO60725 284 aa8.33□□□□□ -1.08
SMNDC1-205ENST00000477763 MPSTP25325 297 aa8.33□□□□□ -1.08
SMNDC1-205ENST00000477763 MAP3K10Q02779 954 aa8.33□□□□□ -1.08
SMNDC1-205ENST00000477763 KCNA1Q09470 495 aa8.33□□□□□ -1.08
SMNDC1-205ENST00000477763 SYT9Q86SS6 491 aa8.33□□□□□ -1.08
SMNDC1-205ENST00000477763 AEBP1Q8IUX7 1158 aa8.33□□□□□ -1.08
SMNDC1-205ENST00000477763 RGL4Q8IZJ4 473 aa8.33□□□□□ -1.08
SMNDC1-205ENST00000477763 KLF15Q9UIH9 416 aa8.33□□□□□ -1.08
SMNDC1-205ENST00000477763 NEURL1BA8MQ27 555 aa8.32□□□□□ -1.08
SMNDC1-205ENST00000477763 EIF1AXP47813 144 aaKnown RBP8.32□□□□□ -1.08
SMNDC1-205ENST00000477763 SERPINB4P48594 390 aa8.32□□□□□ -1.08
SMNDC1-205ENST00000477763 MTMR3Q13615 1198 aa8.32□□□□□ -1.08
SMNDC1-205ENST00000477763 TNFRSF25Q93038 417 aa8.32□□□□□ -1.08
SMNDC1-205ENST00000477763 ENAMQ9NRM1 1142 aa8.32□□□□□ -1.08
SMNDC1-205ENST00000477763 KCNMB2Q9Y691 235 aa8.32□□□□□ -1.08
SMNDC1-205ENST00000477763 MAP3K6O95382 1288 aa8.31□□□□□ -1.08
SMNDC1-205ENST00000477763 RPLP1P05386 114 aaKnown RBP8.31□□□□□ -1.08
SMNDC1-205ENST00000477763 EPXP11678 715 aa8.31□□□□□ -1.08
SMNDC1-205ENST00000477763 MARSP56192 900 aaKnown RBP8.31□□□□□ -1.08
SMNDC1-205ENST00000477763 PCBP4P57723 403 aaKnown RBP8.31□□□□□ -1.08
SMNDC1-205ENST00000477763 TRIM26Q12899 539 aaPredicted RBP8.31□□□□□ -1.08
SMNDC1-205ENST00000477763 ZNF211Q13398 564 aaPredicted RBP8.31□□□□□ -1.08
SMNDC1-205ENST00000477763 FCHSD1Q86WN1 690 aa8.31□□□□□ -1.08
SMNDC1-205ENST00000477763 CMTR1Q8N1G2 835 aaKnown RBP8.31□□□□□ -1.08
SMNDC1-205ENST00000477763 PNMA5Q96PV4 448 aa8.31□□□□□ -1.08
SMNDC1-205ENST00000477763 MDFIQ99750 246 aa8.31□□□□□ -1.08
SMNDC1-205ENST00000477763 GTF3C5Q9Y5Q8 519 aaPredicted RBP8.31□□□□□ -1.08
SMNDC1-205ENST00000477763 ADARB2-AS1A8MUL3 147 aa8.3□□□□□ -1.08
SMNDC1-205ENST00000477763 XYLBO75191 536 aa8.3□□□□□ -1.08
SMNDC1-205ENST00000477763 EDARADDQ8WWZ3 215 aa8.3□□□□□ -1.08
SMNDC1-205ENST00000477763 BHMTQ93088 406 aa8.3□□□□□ -1.08
SMNDC1-205ENST00000477763 FNDC3AQ9Y2H6 1198 aaKnown RBP8.3□□□□□ -1.08
SMNDC1-205ENST00000477763 H3BRB1 525 aa8.29□□□□□ -1.08
SMNDC1-205ENST00000477763 MZF1P28698 734 aaPredicted RBP8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms