RNA–Protein interactions for RNA: ENST00000477748.1

PDE6D-204, Transcript of phosphodiesterase 6D, humanhuman

TSL 1 (best)

Gene PDE6D, Length 996 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6D-204ENST00000477748 FER1L6Q2WGJ9 1857 aa18.29■□□□□ 0.52
PDE6D-204ENST00000477748 GIGYF2Q6Y7W6 1299 aaKnown RBP18.29■□□□□ 0.52
PDE6D-204ENST00000477748 DBF4Q9UBU7 674 aaPredicted RBP18.29■□□□□ 0.52
PDE6D-204ENST00000477748 GPTP24298 496 aa18.28■□□□□ 0.52
PDE6D-204ENST00000477748 ERFEQ4G0M1 354 aa18.28■□□□□ 0.52
PDE6D-204ENST00000477748 CCDC93Q567U6 631 aa18.28■□□□□ 0.52
PDE6D-204ENST00000477748 TSR2Q969E8 191 aaKnown RBP18.28■□□□□ 0.52
PDE6D-204ENST00000477748 RIC1Q4ADV7 1423 aa18.28■□□□□ 0.52
PDE6D-204ENST00000477748 SLX4Q8IY92 1834 aa18.28■□□□□ 0.52
PDE6D-204ENST00000477748 VEGFAP15692 232 aaPredicted RBP18.27■□□□□ 0.52
PDE6D-204ENST00000477748 DPY19L2Q6NUT2 758 aa18.27■□□□□ 0.52
PDE6D-204ENST00000477748 C8orf58Q8NAV2 365 aa18.27■□□□□ 0.52
PDE6D-204ENST00000477748 C7orf43Q8WVR3 580 aa18.27■□□□□ 0.52
PDE6D-204ENST00000477748 IL16Q14005 1332 aa18.26■□□□□ 0.51
PDE6D-204ENST00000477748 ALDH1B1P30837 517 aa18.26■□□□□ 0.51
PDE6D-204ENST00000477748 CRY2Q49AN0 593 aa18.26■□□□□ 0.51
PDE6D-204ENST00000477748 ZNF34Q8IZ26 560 aa18.26■□□□□ 0.51
PDE6D-204ENST00000477748 SMC1BQ8NDV3 1235 aa18.26■□□□□ 0.51
PDE6D-204ENST00000477748 HYPKQ9NX55 129 aa18.26■□□□□ 0.51
PDE6D-204ENST00000477748 ABCC12Q96J65 1359 aa18.26■□□□□ 0.51
PDE6D-204ENST00000477748 UBN2Q6ZU65 1347 aa18.25■□□□□ 0.51
PDE6D-204ENST00000477748 WDR63Q8IWG1 891 aa18.25■□□□□ 0.51
PDE6D-204ENST00000477748 KLRG1Q96E93 195 aa18.25■□□□□ 0.51
PDE6D-204ENST00000477748 ANKRD36CQ5JPF3 1778 aa18.25■□□□□ 0.51
PDE6D-204ENST00000477748 CACNA1SQ13698 1873 aa18.24■□□□□ 0.51
PDE6D-204ENST00000477748 PARP10Q53GL7 1025 aa18.24■□□□□ 0.51
PDE6D-204ENST00000477748 HSP90AB3PQ58FF7 597 aa18.24■□□□□ 0.51
PDE6D-204ENST00000477748 SUSD4Q5VX71 490 aa18.24■□□□□ 0.51
PDE6D-204ENST00000477748 NUTM1Q86Y26 1132 aa18.24■□□□□ 0.51
PDE6D-204ENST00000477748 RTKN2Q8IZC4 609 aa18.24■□□□□ 0.51
PDE6D-204ENST00000477748 TSPYL6Q8N831 410 aa18.24■□□□□ 0.51
PDE6D-204ENST00000477748 JMYQ8N9B5 988 aa18.24■□□□□ 0.51
PDE6D-204ENST00000477748 CHMP4AQ9BY43 222 aa18.24■□□□□ 0.51
PDE6D-204ENST00000477748 DICER1Q9UPY3 1922 aaKnown RBP18.23■□□□□ 0.51
PDE6D-204ENST00000477748 FKBP4Q02790 459 aaKnown RBP eCLIP18.23■□□□□ 0.51
PDE6D-204ENST00000477748 PPP1R42Q7Z4L9 355 aa18.23■□□□□ 0.51
PDE6D-204ENST00000477748 TNS4Q8IZW8 715 aa18.23■□□□□ 0.51
PDE6D-204ENST00000477748 CCDC88AQ3V6T2 1871 aa18.22■□□□□ 0.51
PDE6D-204ENST00000477748 TCIRG1Q13488 830 aa18.22■□□□□ 0.51
PDE6D-204ENST00000477748 CCDC30Q5VVM6 783 aa18.22■□□□□ 0.51
PDE6D-204ENST00000477748 ANKRD13DQ6ZTN6 518 aa18.22■□□□□ 0.51
PDE6D-204ENST00000477748 PLBD2Q8NHP8 589 aa18.22■□□□□ 0.51
PDE6D-204ENST00000477748 RNF123Q5XPI4 1314 aa18.22■□□□□ 0.51
PDE6D-204ENST00000477748 NTSR2O95665 410 aa18.21■□□□□ 0.51
PDE6D-204ENST00000477748 HTRA3P83110 453 aa18.21■□□□□ 0.51
PDE6D-204ENST00000477748 TWISTNBQ3B726 338 aaPredicted RBP18.21■□□□□ 0.51
PDE6D-204ENST00000477748 RPGRQ92834 1020 aaKnown RBP18.21■□□□□ 0.51
PDE6D-204ENST00000477748 UTP14AQ9BVJ6 771 aaKnown RBP18.21■□□□□ 0.51
PDE6D-204ENST00000477748 FANCIQ9NVI1 1328 aa18.21■□□□□ 0.51
PDE6D-204ENST00000477748 CCER2I3L3R5 266 aa18.2■□□□□ 0.5
PDE6D-204ENST00000477748 HOXA10P31260 410 aaPredicted RBP18.2■□□□□ 0.5
PDE6D-204ENST00000477748 CC2D2BQ6DHV5 1058 aa18.2■□□□□ 0.5
PDE6D-204ENST00000477748 PHAXQ9H814 394 aaKnown RBP18.2■□□□□ 0.5
PDE6D-204ENST00000477748 GOLGA2Q08379 1002 aa18.19■□□□□ 0.5
PDE6D-204ENST00000477748 GRIPAP1Q4V328 841 aa18.19■□□□□ 0.5
PDE6D-204ENST00000477748 NLRP10Q86W26 655 aa18.19■□□□□ 0.5
PDE6D-204ENST00000477748 PSMD1Q99460 953 aa18.19■□□□□ 0.5
PDE6D-204ENST00000477748 SNED1Q8TER0 1413 aa18.18■□□□□ 0.5
PDE6D-204ENST00000477748 POTECB2RU33 542 aa18.18■□□□□ 0.5
PDE6D-204ENST00000477748 RIC3Q7Z5B4 369 aa18.18■□□□□ 0.5
PDE6D-204ENST00000477748 RBM17Q96I25 401 aaKnown RBP18.18■□□□□ 0.5
PDE6D-204ENST00000477748 STK31Q9BXU1 1019 aa18.18■□□□□ 0.5
PDE6D-204ENST00000477748 ZNF277Q9NRM2 450 aaPredicted RBP18.18■□□□□ 0.5
PDE6D-204ENST00000477748 IQCA1LA6NCM1 817 aa18.17■□□□□ 0.5
PDE6D-204ENST00000477748 TCERG1O14776 1098 aaKnown RBP18.17■□□□□ 0.5
PDE6D-204ENST00000477748 L3MBTL3Q96JM7 780 aaPredicted RBP18.17■□□□□ 0.5
PDE6D-204ENST00000477748 CRAMP1Q96RY5 1269 aa18.17■□□□□ 0.5
PDE6D-204ENST00000477748 ATP5J2-PTCD1G3V325 749 aa18.16■□□□□ 0.5
PDE6D-204ENST00000477748 IARSP41252 1262 aaKnown RBP18.16■□□□□ 0.5
PDE6D-204ENST00000477748 EXOSC9Q06265 439 aaKnown RBP18.16■□□□□ 0.5
PDE6D-204ENST00000477748 SLC10A5Q5PT55 438 aa18.16■□□□□ 0.5
PDE6D-204ENST00000477748 OLFM4Q6UX06 510 aa18.16■□□□□ 0.5
PDE6D-204ENST00000477748 NLRP3Q96P20 1036 aa18.16■□□□□ 0.5
PDE6D-204ENST00000477748 MYH16Q9H6N6 1097 aa18.16■□□□□ 0.5
PDE6D-204ENST00000477748 SPINK5Q9NQ38 1064 aaPredicted RBP18.16■□□□□ 0.5
PDE6D-204ENST00000477748 TRMT112Q9UI30 125 aaKnown RBP18.16■□□□□ 0.5
PDE6D-204ENST00000477748 PCNTO95613 3336 aa18.16■□□□□ 0.5
PDE6D-204ENST00000477748 PPEF1O14829 653 aaPredicted RBP18.15■□□□□ 0.5
PDE6D-204ENST00000477748 DDNO94850 711 aaPredicted RBP18.15■□□□□ 0.5
PDE6D-204ENST00000477748 DDX58O95786 925 aaKnown RBP18.15■□□□□ 0.5
PDE6D-204ENST00000477748 DIEXFQ68CQ4 756 aaKnown RBP18.15■□□□□ 0.5
PDE6D-204ENST00000477748 SYNE4Q8N205 404 aa18.15■□□□□ 0.5
PDE6D-204ENST00000477748 ZNF428Q96B54 188 aa18.15■□□□□ 0.5
PDE6D-204ENST00000477748 ISCA1Q9BUE6 129 aa18.15■□□□□ 0.5
PDE6D-204ENST00000477748 SH3TC1Q8TE82 1336 aa18.15■□□□□ 0.5
PDE6D-204ENST00000477748 CACNA1FO60840 1977 aa18.13■□□□□ 0.49
PDE6D-204ENST00000477748 VAMP4O75379 141 aa18.13■□□□□ 0.49
PDE6D-204ENST00000477748 SLC4A2P04920 1241 aa18.13■□□□□ 0.49
PDE6D-204ENST00000477748 C3orf67Q6ZVT6 689 aa18.13■□□□□ 0.49
PDE6D-204ENST00000477748 JDP2Q8WYK2 163 aa18.13■□□□□ 0.49
PDE6D-204ENST00000477748 TMX4Q9H1E5 349 aaPredicted RBP18.13■□□□□ 0.49
PDE6D-204ENST00000477748 ZNF521Q96K83 1311 aa18.13■□□□□ 0.49
PDE6D-204ENST00000477748 FZD9O00144 591 aa18.12■□□□□ 0.49
PDE6D-204ENST00000477748 HCLS1P14317 486 aaPredicted RBP18.12■□□□□ 0.49
PDE6D-204ENST00000477748 CHADLQ6NUI6 762 aa18.12■□□□□ 0.49
PDE6D-204ENST00000477748 MYD88Q99836 296 aa18.12■□□□□ 0.49
PDE6D-204ENST00000477748 ZNF541Q9H0D2 1346 aa18.12■□□□□ 0.49
PDE6D-204ENST00000477748 LAMB2P55268 1798 aa18.12■□□□□ 0.49
PDE6D-204ENST00000477748 TRIM28Q13263 835 aaKnown RBP18.11■□□□□ 0.49
PDE6D-204ENST00000477748 G2E3Q7L622 706 aa18.11■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms