RNA–Protein interactions for RNA: ENST00000477741.5

NELFCD-205, Transcript of negative elongation factor complex member C/D, humanhuman

TSL 1 (best)

Gene NELFCD, Length 2,070 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFCD-205ENST00000477741 BCL11AQ9H165 835 aa17.89■□□□□ 0.45
NELFCD-205ENST00000477741 AFDNP55196 1824 aaKnown RBP17.88■□□□□ 0.45
NELFCD-205ENST00000477741 TRAPPC3LQ5T215 181 aa17.88■□□□□ 0.45
NELFCD-205ENST00000477741 SUSD4Q5VX71 490 aa17.88■□□□□ 0.45
NELFCD-205ENST00000477741 SMC5Q8IY18 1101 aa17.88■□□□□ 0.45
NELFCD-205ENST00000477741 NARFQ9UHQ1 456 aa17.88■□□□□ 0.45
NELFCD-205ENST00000477741 APBB1O00213 710 aa17.87■□□□□ 0.45
NELFCD-205ENST00000477741 SRGAP3O43295 1099 aa17.87■□□□□ 0.45
NELFCD-205ENST00000477741 HSP90AB3PQ58FF7 597 aa17.87■□□□□ 0.45
NELFCD-205ENST00000477741 PDZRN3Q9UPQ7 1066 aa17.87■□□□□ 0.45
NELFCD-205ENST00000477741 NIP7Q9Y221 180 aaKnown RBP eCLIP17.87■□□□□ 0.45
NELFCD-205ENST00000477741 TBC1D9BQ66K14 1250 aa17.87■□□□□ 0.45
NELFCD-205ENST00000477741 NUP98P52948 1817 aa17.87■□□□□ 0.45
NELFCD-205ENST00000477741 AKT1S1Q96B36 256 aa17.86■□□□□ 0.45
NELFCD-205ENST00000477741 ANO8Q9HCE9 1232 aaPredicted RBP17.86■□□□□ 0.45
NELFCD-205ENST00000477741 EXOC6BQ9Y2D4 811 aa17.86■□□□□ 0.45
NELFCD-205ENST00000477741 ZPR1O75312 459 aa17.86■□□□□ 0.45
NELFCD-205ENST00000477741 RFC4P35249 363 aa17.86■□□□□ 0.45
NELFCD-205ENST00000477741 KLHDC4Q8TBB5 520 aa17.86■□□□□ 0.45
NELFCD-205ENST00000477741 DCTPP1Q9H773 170 aa17.86■□□□□ 0.45
NELFCD-205ENST00000477741 TRMT112Q9UI30 125 aaKnown RBP17.86■□□□□ 0.45
NELFCD-205ENST00000477741 IBTKQ9P2D0 1353 aaPredicted RBP17.85■□□□□ 0.45
NELFCD-205ENST00000477741 USP42Q9H9J4 1324 aaKnown RBP17.85■□□□□ 0.45
NELFCD-205ENST00000477741 FOXO4P98177 505 aa17.85■□□□□ 0.45
NELFCD-205ENST00000477741 ZBTB38Q8NAP3 1195 aaPredicted RBP17.85■□□□□ 0.45
NELFCD-205ENST00000477741 SSH3Q8TE77 659 aa17.85■□□□□ 0.45
NELFCD-205ENST00000477741 CCDC85AQ96PX6 553 aaPredicted RBP17.85■□□□□ 0.45
NELFCD-205ENST00000477741 TFCP2L1Q9NZI6 479 aa17.85■□□□□ 0.45
NELFCD-205ENST00000477741 PA2G4Q9UQ80 394 aaKnown RBP17.85■□□□□ 0.45
NELFCD-205ENST00000477741 RGS3P49796 1198 aa17.84■□□□□ 0.45
NELFCD-205ENST00000477741 POLA2Q14181 598 aa17.84■□□□□ 0.45
NELFCD-205ENST00000477741 NUTM1Q86Y26 1132 aa17.84■□□□□ 0.45
NELFCD-205ENST00000477741 PCCAP05165 728 aaPredicted RBP17.84■□□□□ 0.45
NELFCD-205ENST00000477741 MTX1Q13505 466 aa17.83■□□□□ 0.45
NELFCD-205ENST00000477741 ANKRD45Q5TZF3 282 aa17.83■□□□□ 0.45
NELFCD-205ENST00000477741 LMBR1LQ6UX01 489 aa17.83■□□□□ 0.45
NELFCD-205ENST00000477741 CLEC4GQ6UXB4 293 aa17.83■□□□□ 0.45
NELFCD-205ENST00000477741 LNPKQ9C0E8 428 aa17.83■□□□□ 0.45
NELFCD-205ENST00000477741 ZNF652Q9Y2D9 606 aa17.83■□□□□ 0.45
NELFCD-205ENST00000477741 UBR3Q6ZT12 1888 aa17.83■□□□□ 0.44
NELFCD-205ENST00000477741 SMARCA5O60264 1052 aaPredicted RBP17.83■□□□□ 0.44
NELFCD-205ENST00000477741 HMMRO75330 724 aa17.83■□□□□ 0.44
NELFCD-205ENST00000477741 SSFA2P28290 1259 aa17.83■□□□□ 0.44
NELFCD-205ENST00000477741 BCORQ6W2J9 1755 aa17.82■□□□□ 0.44
NELFCD-205ENST00000477741 NTSR2O95665 410 aa17.82■□□□□ 0.44
NELFCD-205ENST00000477741 HCLS1P14317 486 aaPredicted RBP17.82■□□□□ 0.44
NELFCD-205ENST00000477741 PDE4AP27815 886 aa17.82■□□□□ 0.44
NELFCD-205ENST00000477741 SF3B2Q13435 895 aaKnown RBP17.82■□□□□ 0.44
NELFCD-205ENST00000477741 COL23A1Q86Y22 540 aaPredicted RBP17.82■□□□□ 0.44
NELFCD-205ENST00000477741 CCDC24Q8N4L8 307 aa17.82■□□□□ 0.44
NELFCD-205ENST00000477741 C4AP0C0L4 1744 aa17.82■□□□□ 0.44
NELFCD-205ENST00000477741 GYS1P13807 737 aa17.81■□□□□ 0.44
NELFCD-205ENST00000477741 NUCB1Q02818 461 aa17.81■□□□□ 0.44
NELFCD-205ENST00000477741 RABL6Q3YEC7 729 aaPredicted RBP17.81■□□□□ 0.44
NELFCD-205ENST00000477741 GCC1Q96CN9 775 aa17.81■□□□□ 0.44
NELFCD-205ENST00000477741 CHMP3Q9Y3E7 222 aa17.81■□□□□ 0.44
NELFCD-205ENST00000477741 ANKRD36CQ5JPF3 1778 aa17.81■□□□□ 0.44
NELFCD-205ENST00000477741 IRS4O14654 1257 aaPredicted RBP17.81■□□□□ 0.44
NELFCD-205ENST00000477741 ADRA2BP18089 450 aa17.81■□□□□ 0.44
NELFCD-205ENST00000477741 UTP14AQ9BVJ6 771 aaKnown RBP17.81■□□□□ 0.44
NELFCD-205ENST00000477741 SCN7AQ01118 1682 aa17.81■□□□□ 0.44
NELFCD-205ENST00000477741 SURF6O75683 361 aaKnown RBP17.8■□□□□ 0.44
NELFCD-205ENST00000477741 BAG6P46379 1132 aa17.8■□□□□ 0.44
NELFCD-205ENST00000477741 MSH5O43196 834 aa17.79■□□□□ 0.44
NELFCD-205ENST00000477741 RFX5P48382 616 aaPredicted RBP17.79■□□□□ 0.44
NELFCD-205ENST00000477741 PARP10Q53GL7 1025 aa17.79■□□□□ 0.44
NELFCD-205ENST00000477741 CHD1LQ86WJ1 897 aa17.79■□□□□ 0.44
NELFCD-205ENST00000477741 C16orf71Q8IYS4 520 aaPredicted RBP17.79■□□□□ 0.44
NELFCD-205ENST00000477741 SIL1Q9H173 461 aa17.79■□□□□ 0.44
NELFCD-205ENST00000477741 PNPLA7Q6ZV29 1317 aa17.79■□□□□ 0.44
NELFCD-205ENST00000477741 NFIXQ14938 502 aa17.79■□□□□ 0.44
NELFCD-205ENST00000477741 ERFEQ4G0M1 354 aa17.79■□□□□ 0.44
NELFCD-205ENST00000477741 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.79■□□□□ 0.44
NELFCD-205ENST00000477741 FAM161AQ3B820 660 aa17.78■□□□□ 0.44
NELFCD-205ENST00000477741 OTUD7AQ8TE49 926 aaPredicted RBP17.78■□□□□ 0.44
NELFCD-205ENST00000477741 ZNF594Q96JF6 807 aaPredicted RBP17.78■□□□□ 0.44
NELFCD-205ENST00000477741 SETDB2Q96T68 719 aa17.78■□□□□ 0.44
NELFCD-205ENST00000477741 HDAC5Q9UQL6 1122 aa17.78■□□□□ 0.44
NELFCD-205ENST00000477741 SH3TC1Q8TE82 1336 aa17.78■□□□□ 0.44
NELFCD-205ENST00000477741 CDHR2Q9BYE9 1310 aa17.78■□□□□ 0.44
NELFCD-205ENST00000477741 C3orf67Q6ZVT6 689 aa17.78■□□□□ 0.44
NELFCD-205ENST00000477741 PDGFDQ9GZP0 370 aaPredicted RBP17.78■□□□□ 0.44
NELFCD-205ENST00000477741 PTPN12Q05209 780 aaKnown RBP17.77■□□□□ 0.44
NELFCD-205ENST00000477741 PLA2G12BQ9BX93 195 aa17.77■□□□□ 0.44
NELFCD-205ENST00000477741 SLC15A2Q16348 729 aa17.76■□□□□ 0.43
NELFCD-205ENST00000477741 TTLL11Q8NHH1 800 aa17.76■□□□□ 0.43
NELFCD-205ENST00000477741 IL1RAPL2Q9NP60 686 aa17.76■□□□□ 0.43
NELFCD-205ENST00000477741 ABCC12Q96J65 1359 aa17.76■□□□□ 0.43
NELFCD-205ENST00000477741 GREM2Q9H772 168 aa17.76■□□□□ 0.43
NELFCD-205ENST00000477741 RGPD3A6NKT7 1758 aaPredicted RBP17.76■□□□□ 0.43
NELFCD-205ENST00000477741 RGPD4Q7Z3J3 1758 aa17.76■□□□□ 0.43
NELFCD-205ENST00000477741 CSF1RP07333 972 aa17.75■□□□□ 0.43
NELFCD-205ENST00000477741 CTSWP56202 376 aa17.75■□□□□ 0.43
NELFCD-205ENST00000477741 MSL1Q68DK7 614 aa17.75■□□□□ 0.43
NELFCD-205ENST00000477741 NBPF5PQ86XG9 351 aaPredicted RBP17.75■□□□□ 0.43
NELFCD-205ENST00000477741 TUBGCP6Q96RT7 1819 aa17.75■□□□□ 0.43
NELFCD-205ENST00000477741 PDE8AO60658 829 aa17.75■□□□□ 0.43
NELFCD-205ENST00000477741 NOP58Q9Y2X3 529 aaKnown RBP17.75■□□□□ 0.43
NELFCD-205ENST00000477741 RGL2O15211 777 aa17.74■□□□□ 0.43
NELFCD-205ENST00000477741 DDR1Q08345 913 aa17.74■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms