RNA–Protein interactions for RNA: ENST00000477693.1

NIFK-205, Transcript of nucleolar protein interacting with the FHA domain of MKI67, humanhuman

TSL 1 (best)

Gene NIFK, Length 1,096 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIFK-205ENST00000477693 PDZRN3Q9UPQ7 1066 aa12.58□□□□□ -0.4
NIFK-205ENST00000477693 NPHP1O15259 732 aa12.57□□□□□ -0.4
NIFK-205ENST00000477693 CHRNA5P30532 468 aa12.57□□□□□ -0.4
NIFK-205ENST00000477693 PDE6BP35913 854 aa12.57□□□□□ -0.4
NIFK-205ENST00000477693 PARP10Q53GL7 1025 aa12.57□□□□□ -0.4
NIFK-205ENST00000477693 HSP90AB3PQ58FF7 597 aa12.57□□□□□ -0.4
NIFK-205ENST00000477693 ANKRD13DQ6ZTN6 518 aa12.57□□□□□ -0.4
NIFK-205ENST00000477693 TRMT2AQ8IZ69 625 aaKnown RBP12.57□□□□□ -0.4
NIFK-205ENST00000477693 PLBD2Q8NHP8 589 aa12.57□□□□□ -0.4
NIFK-205ENST00000477693 NYXQ9GZU5 481 aa12.57□□□□□ -0.4
NIFK-205ENST00000477693 PIM2Q9P1W9 311 aa12.57□□□□□ -0.4
NIFK-205ENST00000477693 ANKRD31Q8N7Z5 1873 aa12.57□□□□□ -0.4
NIFK-205ENST00000477693 DLEC1Q9Y238 1755 aa12.56□□□□□ -0.4
NIFK-205ENST00000477693 CEP350Q5VT06 3117 aa12.56□□□□□ -0.4
NIFK-205ENST00000477693 RIC1Q4ADV7 1423 aa12.56□□□□□ -0.4
NIFK-205ENST00000477693 VAMP4O75379 141 aa12.56□□□□□ -0.4
NIFK-205ENST00000477693 CT47B1P0C2W7 299 aaPredicted RBP12.56□□□□□ -0.4
NIFK-205ENST00000477693 GPTP24298 496 aa12.56□□□□□ -0.4
NIFK-205ENST00000477693 EXOSC9Q06265 439 aaKnown RBP12.56□□□□□ -0.4
NIFK-205ENST00000477693 SLFN5Q08AF3 891 aa12.56□□□□□ -0.4
NIFK-205ENST00000477693 TCIRG1Q13488 830 aa12.56□□□□□ -0.4
NIFK-205ENST00000477693 WWC3Q9ULE0 1092 aa12.56□□□□□ -0.4
NIFK-205ENST00000477693 KLRG2A4D1S0 409 aaPredicted RBP12.55□□□□□ -0.4
NIFK-205ENST00000477693 H0YIN7 160 aa12.55□□□□□ -0.4
NIFK-205ENST00000477693 NTSR2O95665 410 aa12.55□□□□□ -0.4
NIFK-205ENST00000477693 SUSD4Q5VX71 490 aa12.55□□□□□ -0.4
NIFK-205ENST00000477693 PPP1R42Q7Z4L9 355 aa12.55□□□□□ -0.4
NIFK-205ENST00000477693 C2CD5Q86YS7 1000 aa12.55□□□□□ -0.4
NIFK-205ENST00000477693 CCDC24Q8N4L8 307 aa12.55□□□□□ -0.4
NIFK-205ENST00000477693 STK31Q9BXU1 1019 aa12.55□□□□□ -0.4
NIFK-205ENST00000477693 PHAXQ9H814 394 aaKnown RBP12.55□□□□□ -0.4
NIFK-205ENST00000477693 BCS1LQ9Y276 419 aa12.55□□□□□ -0.4
NIFK-205ENST00000477693 ANKRD36CQ5JPF3 1778 aa12.55□□□□□ -0.4
NIFK-205ENST00000477693 FAM177BA6PVY3 158 aa12.54□□□□□ -0.4
NIFK-205ENST00000477693 DALRD3Q5D0E6 543 aaKnown RBP12.54□□□□□ -0.4
NIFK-205ENST00000477693 RNF123Q5XPI4 1314 aa12.54□□□□□ -0.4
NIFK-205ENST00000477693 ABCC12Q96J65 1359 aa12.54□□□□□ -0.4
NIFK-205ENST00000477693 COL11A2P13942 1736 aaPredicted RBP12.54□□□□□ -0.4
NIFK-205ENST00000477693 ARFGEF2Q9Y6D5 1785 aa12.53□□□□□ -0.4
NIFK-205ENST00000477693 ARFGEF1Q9Y6D6 1849 aa12.53□□□□□ -0.4
NIFK-205ENST00000477693 DDX58O95786 925 aaKnown RBP12.53□□□□□ -0.4
NIFK-205ENST00000477693 SRGNP10124 158 aa12.53□□□□□ -0.4
NIFK-205ENST00000477693 GTF2E1P29083 439 aaPredicted RBP12.53□□□□□ -0.4
NIFK-205ENST00000477693 NLRP10Q86W26 655 aa12.53□□□□□ -0.4
NIFK-205ENST00000477693 NUTM1Q86Y26 1132 aa12.53□□□□□ -0.4
NIFK-205ENST00000477693 ZNF428Q96B54 188 aa12.53□□□□□ -0.4
NIFK-205ENST00000477693 ISCA1Q9BUE6 129 aa12.53□□□□□ -0.4
NIFK-205ENST00000477693 UTP14AQ9BVJ6 771 aaKnown RBP12.53□□□□□ -0.4
NIFK-205ENST00000477693 TRIM28Q13263 835 aaKnown RBP12.52□□□□□ -0.41
NIFK-205ENST00000477693 CRY2Q49AN0 593 aa12.52□□□□□ -0.41
NIFK-205ENST00000477693 ERFEQ4G0M1 354 aa12.52□□□□□ -0.41
NIFK-205ENST00000477693 STYK1Q6J9G0 422 aa12.52□□□□□ -0.41
NIFK-205ENST00000477693 RIC3Q7Z5B4 369 aa12.52□□□□□ -0.41
NIFK-205ENST00000477693 TTLL6Q8N841 843 aa12.52□□□□□ -0.41
NIFK-205ENST00000477693 MASTLQ96GX5 879 aa12.52□□□□□ -0.41
NIFK-205ENST00000477693 TNRC6CQ9HCJ0 1690 aaKnown RBP12.51□□□□□ -0.41
NIFK-205ENST00000477693 TCERG1O14776 1098 aaKnown RBP12.51□□□□□ -0.41
NIFK-205ENST00000477693 PRR29P0C7W0 189 aa12.51□□□□□ -0.41
NIFK-205ENST00000477693 CNKSR1Q969H4 720 aa12.51□□□□□ -0.41
NIFK-205ENST00000477693 ADCY9O60503 1353 aa12.51□□□□□ -0.41
NIFK-205ENST00000477693 NPR1P16066 1061 aa12.5□□□□□ -0.41
NIFK-205ENST00000477693 FLIIQ13045 1269 aa12.5□□□□□ -0.41
NIFK-205ENST00000477693 SLC10A5Q5PT55 438 aa12.5□□□□□ -0.41
NIFK-205ENST00000477693 KSR2Q6VAB6 950 aa12.5□□□□□ -0.41
NIFK-205ENST00000477693 G2E3Q7L622 706 aa12.5□□□□□ -0.41
NIFK-205ENST00000477693 ZNF622Q969S3 477 aaKnown RBP eCLIP12.5□□□□□ -0.41
NIFK-205ENST00000477693 CDCA7LQ96GN5 454 aa12.5□□□□□ -0.41
NIFK-205ENST00000477693 METTL22Q9BUU2 404 aaPredicted RBP12.5□□□□□ -0.41
NIFK-205ENST00000477693 SH3TC1Q8TE82 1336 aa12.5□□□□□ -0.41
NIFK-205ENST00000477693 PI4KAP2A4QPH2 592 aa12.49□□□□□ -0.41
NIFK-205ENST00000477693 ATP5J2-PTCD1G3V325 749 aa12.49□□□□□ -0.41
NIFK-205ENST00000477693 PRKAR2AP13861 404 aaKnown RBP12.49□□□□□ -0.41
NIFK-205ENST00000477693 PI4KAP1Q8N8J0 262 aa12.49□□□□□ -0.41
NIFK-205ENST00000477693 MYD88Q99836 296 aa12.49□□□□□ -0.41
NIFK-205ENST00000477693 TRMT112Q9UI30 125 aaKnown RBP12.49□□□□□ -0.41
NIFK-205ENST00000477693 MAP3K2Q9Y2U5 619 aa12.49□□□□□ -0.41
NIFK-205ENST00000477693 CACNA1FO60840 1977 aa12.49□□□□□ -0.41
NIFK-205ENST00000477693 HOXA10P31260 410 aaPredicted RBP12.48□□□□□ -0.41
NIFK-205ENST00000477693 PRPF40BQ6NWY9 871 aaKnown RBP12.48□□□□□ -0.41
NIFK-205ENST00000477693 CCDC191Q8NCU4 936 aa12.48□□□□□ -0.41
NIFK-205ENST00000477693 ALDH1B1P30837 517 aa12.47□□□□□ -0.41
NIFK-205ENST00000477693 FKBP5Q13451 457 aaPredicted RBP12.47□□□□□ -0.41
NIFK-205ENST00000477693 ARHGAP27Q6ZUM4 889 aa12.47□□□□□ -0.41
NIFK-205ENST00000477693 ZBTB38Q8NAP3 1195 aaPredicted RBP12.47□□□□□ -0.41
NIFK-205ENST00000477693 RPGRQ92834 1020 aaKnown RBP12.47□□□□□ -0.41
NIFK-205ENST00000477693 NLRP3Q96P20 1036 aa12.47□□□□□ -0.41
NIFK-205ENST00000477693 IGKV5-2P06315 115 aa12.46□□□□□ -0.41
NIFK-205ENST00000477693 HCLS1P14317 486 aaPredicted RBP12.46□□□□□ -0.41
NIFK-205ENST00000477693 NEXNQ0ZGT2 675 aa12.46□□□□□ -0.41
NIFK-205ENST00000477693 SOGA3Q5TF21 947 aa12.46□□□□□ -0.41
NIFK-205ENST00000477693 C3orf67Q6ZVT6 689 aa12.46□□□□□ -0.41
NIFK-205ENST00000477693 SYNE4Q8N205 404 aa12.46□□□□□ -0.41
NIFK-205ENST00000477693 C7orf43Q8WVR3 580 aa12.46□□□□□ -0.41
NIFK-205ENST00000477693 FAM89AQ96GI7 184 aa12.46□□□□□ -0.41
NIFK-205ENST00000477693 CWC25Q9NXE8 425 aaPredicted RBP12.46□□□□□ -0.41
NIFK-205ENST00000477693 RCAN3Q9UKA8 241 aa12.46□□□□□ -0.41
NIFK-205ENST00000477693 SLX4Q8IY92 1834 aa12.46□□□□□ -0.42
NIFK-205ENST00000477693 C21orf2O43822 256 aa12.45□□□□□ -0.42
NIFK-205ENST00000477693 PCCAP05165 728 aaPredicted RBP12.45□□□□□ -0.42
NIFK-205ENST00000477693 HSPA6P17066 643 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms