RNA–Protein interactions for RNA: ENST00000477531.3

CLDN11-204, Transcript of claudin 11, humanhuman

TSL 3

Gene CLDN11, Length 1,065 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11-204ENST00000477531 FKBP4Q02790 459 aaKnown RBP eCLIP20.42■□□□□ 0.86
CLDN11-204ENST00000477531 CRY2Q49AN0 593 aa20.42■□□□□ 0.86
CLDN11-204ENST00000477531 RBM17Q96I25 401 aaKnown RBP20.42■□□□□ 0.86
CLDN11-204ENST00000477531 NLRP3Q96P20 1036 aa20.42■□□□□ 0.86
CLDN11-204ENST00000477531 ARFGEF2Q9Y6D5 1785 aa20.41■□□□□ 0.86
CLDN11-204ENST00000477531 CC2D2BQ6DHV5 1058 aa20.41■□□□□ 0.86
CLDN11-204ENST00000477531 IFT57Q9NWB7 429 aa20.41■□□□□ 0.86
CLDN11-204ENST00000477531 CHPF2Q9P2E5 772 aa20.41■□□□□ 0.86
CLDN11-204ENST00000477531 DBF4Q9UBU7 674 aaPredicted RBP20.41■□□□□ 0.86
CLDN11-204ENST00000477531 RIC1Q4ADV7 1423 aa20.4■□□□□ 0.86
CLDN11-204ENST00000477531 DUSP27Q5VZP5 1158 aa20.4■□□□□ 0.86
CLDN11-204ENST00000477531 SMC1BQ8NDV3 1235 aa20.4■□□□□ 0.86
CLDN11-204ENST00000477531 TMX4Q9H1E5 349 aaPredicted RBP20.4■□□□□ 0.86
CLDN11-204ENST00000477531 MBIPQ9NS73 344 aa20.4■□□□□ 0.86
CLDN11-204ENST00000477531 TIAM2Q8IVF5 1701 aa20.39■□□□□ 0.86
CLDN11-204ENST00000477531 RNF123Q5XPI4 1314 aa20.39■□□□□ 0.85
CLDN11-204ENST00000477531 ZNF316A6NFI3 1004 aaPredicted RBP20.39■□□□□ 0.85
CLDN11-204ENST00000477531 HOXA10P31260 410 aaPredicted RBP20.39■□□□□ 0.85
CLDN11-204ENST00000477531 TCIRG1Q13488 830 aa20.39■□□□□ 0.85
CLDN11-204ENST00000477531 DICER1Q9UPY3 1922 aaKnown RBP20.38■□□□□ 0.85
CLDN11-204ENST00000477531 ANP32CO43423 234 aa20.38■□□□□ 0.85
CLDN11-204ENST00000477531 GRIPAP1Q4V328 841 aa20.38■□□□□ 0.85
CLDN11-204ENST00000477531 SYNE4Q8N205 404 aa20.38■□□□□ 0.85
CLDN11-204ENST00000477531 CRAMP1Q96RY5 1269 aa20.38■□□□□ 0.85
CLDN11-204ENST00000477531 CHMP4AQ9BY43 222 aa20.38■□□□□ 0.85
CLDN11-204ENST00000477531 ZNF277Q9NRM2 450 aaPredicted RBP20.38■□□□□ 0.85
CLDN11-204ENST00000477531 HYPKQ9NX55 129 aa20.38■□□□□ 0.85
CLDN11-204ENST00000477531 ZNF853P0CG23 659 aa20.37■□□□□ 0.85
CLDN11-204ENST00000477531 SLC10A5Q5PT55 438 aa20.37■□□□□ 0.85
CLDN11-204ENST00000477531 OLFM4Q6UX06 510 aa20.37■□□□□ 0.85
CLDN11-204ENST00000477531 ANKRD13DQ6ZTN6 518 aa20.37■□□□□ 0.85
CLDN11-204ENST00000477531 NLRP10Q86W26 655 aa20.37■□□□□ 0.85
CLDN11-204ENST00000477531 PLBD2Q8NHP8 589 aa20.37■□□□□ 0.85
CLDN11-204ENST00000477531 TRMT112Q9UI30 125 aaKnown RBP20.37■□□□□ 0.85
CLDN11-204ENST00000477531 PPEF1O14829 653 aaPredicted RBP20.35■□□□□ 0.85
CLDN11-204ENST00000477531 DDNO94850 711 aaPredicted RBP20.35■□□□□ 0.85
CLDN11-204ENST00000477531 IARSP41252 1262 aaKnown RBP20.35■□□□□ 0.85
CLDN11-204ENST00000477531 PSMD1Q99460 953 aa20.35■□□□□ 0.85
CLDN11-204ENST00000477531 SH3TC1Q8TE82 1336 aa20.34■□□□□ 0.85
CLDN11-204ENST00000477531 JDP2Q8WYK2 163 aa20.34■□□□□ 0.85
CLDN11-204ENST00000477531 IQCA1LA6NCM1 817 aa20.33■□□□□ 0.85
CLDN11-204ENST00000477531 ELL2O00472 640 aaPredicted RBP20.33■□□□□ 0.85
CLDN11-204ENST00000477531 TCERG1O14776 1098 aaKnown RBP20.33■□□□□ 0.85
CLDN11-204ENST00000477531 MRS2Q9HD23 443 aa20.33■□□□□ 0.85
CLDN11-204ENST00000477531 POTECB2RU33 542 aa20.32■□□□□ 0.84
CLDN11-204ENST00000477531 HCLS1P14317 486 aaPredicted RBP20.32■□□□□ 0.84
CLDN11-204ENST00000477531 GOLGA2Q08379 1002 aa20.32■□□□□ 0.84
CLDN11-204ENST00000477531 CCDC184Q52MB2 194 aa20.32■□□□□ 0.84
CLDN11-204ENST00000477531 C3orf67Q6ZVT6 689 aa20.32■□□□□ 0.84
CLDN11-204ENST00000477531 DDX46Q7L014 1031 aaKnown RBP20.32■□□□□ 0.84
CLDN11-204ENST00000477531 WDR90Q96KV7 1748 aa20.32■□□□□ 0.84
CLDN11-204ENST00000477531 RIC3Q7Z5B4 369 aa20.31■□□□□ 0.84
CLDN11-204ENST00000477531 BBOX1O75936 387 aa20.3■□□□□ 0.84
CLDN11-204ENST00000477531 CCDC30Q5VVM6 783 aa20.3■□□□□ 0.84
CLDN11-204ENST00000477531 ABCC4O15439 1325 aa20.29■□□□□ 0.84
CLDN11-204ENST00000477531 ANKRD36CQ5JPF3 1778 aa20.29■□□□□ 0.84
CLDN11-204ENST00000477531 ATP5J2-PTCD1G3V325 749 aa20.29■□□□□ 0.84
CLDN11-204ENST00000477531 EIF6P56537 245 aaKnown RBP20.29■□□□□ 0.84
CLDN11-204ENST00000477531 CCDC27Q2M243 656 aa20.29■□□□□ 0.84
CLDN11-204ENST00000477531 LARGE2Q8N3Y3 721 aa20.29■□□□□ 0.84
CLDN11-204ENST00000477531 L3MBTL3Q96JM7 780 aaPredicted RBP20.29■□□□□ 0.84
CLDN11-204ENST00000477531 ISCA1Q9BUE6 129 aa20.29■□□□□ 0.84
CLDN11-204ENST00000477531 ATP6V0A2Q9Y487 856 aa20.29■□□□□ 0.84
CLDN11-204ENST00000477531 FZD9O00144 591 aa20.28■□□□□ 0.84
CLDN11-204ENST00000477531 C8orf58Q8NAV2 365 aa20.28■□□□□ 0.84
CLDN11-204ENST00000477531 SUPT20HQ8NEM7 779 aa20.28■□□□□ 0.84
CLDN11-204ENST00000477531 DDX58O95786 925 aaKnown RBP20.27■□□□□ 0.84
CLDN11-204ENST00000477531 HSP90B1P14625 803 aaKnown RBP20.27■□□□□ 0.84
CLDN11-204ENST00000477531 TRIM28Q13263 835 aaKnown RBP20.27■□□□□ 0.84
CLDN11-204ENST00000477531 DNAJC5GQ8N7S2 189 aa20.27■□□□□ 0.84
CLDN11-204ENST00000477531 ZNF541Q9H0D2 1346 aa20.27■□□□□ 0.83
CLDN11-204ENST00000477531 GRAPQ13588 217 aa20.26■□□□□ 0.83
CLDN11-204ENST00000477531 CHADLQ6NUI6 762 aa20.26■□□□□ 0.83
CLDN11-204ENST00000477531 WWC1Q8IX03 1113 aa20.26■□□□□ 0.83
CLDN11-204ENST00000477531 SP8Q8IXZ3 490 aa20.26■□□□□ 0.83
CLDN11-204ENST00000477531 GPC2Q8N158 579 aa20.26■□□□□ 0.83
CLDN11-204ENST00000477531 GRAPLQ8TC17 118 aaPredicted RBP20.26■□□□□ 0.83
CLDN11-204ENST00000477531 ZNF428Q96B54 188 aa20.26■□□□□ 0.83
CLDN11-204ENST00000477531 FAM89AQ96GI7 184 aa20.26■□□□□ 0.83
CLDN11-204ENST00000477531 VPS33BQ9H267 617 aa20.26■□□□□ 0.83
CLDN11-204ENST00000477531 PHAXQ9H814 394 aaKnown RBP20.26■□□□□ 0.83
CLDN11-204ENST00000477531 HACL1Q9UJ83 578 aa20.26■□□□□ 0.83
CLDN11-204ENST00000477531 PPIP5K2O43314 1243 aa20.25■□□□□ 0.83
CLDN11-204ENST00000477531 NCBP3Q53F19 620 aaKnown RBP20.25■□□□□ 0.83
CLDN11-204ENST00000477531 DPP8Q6V1X1 898 aaPredicted RBP20.25■□□□□ 0.83
CLDN11-204ENST00000477531 TMC4Q7Z404 712 aa20.25■□□□□ 0.83
CLDN11-204ENST00000477531 NIM1KQ8IY84 436 aa20.25■□□□□ 0.83
CLDN11-204ENST00000477531 STK31Q9BXU1 1019 aa20.25■□□□□ 0.83
CLDN11-204ENST00000477531 TAF1DQ9H5J8 278 aaPredicted RBP20.25■□□□□ 0.83
CLDN11-204ENST00000477531 SNED1Q8TER0 1413 aa20.25■□□□□ 0.83
CLDN11-204ENST00000477531 HTRA3P83110 453 aa20.24■□□□□ 0.83
CLDN11-204ENST00000477531 LDHDQ86WU2 507 aa20.24■□□□□ 0.83
CLDN11-204ENST00000477531 MPNDQ8N594 471 aa20.24■□□□□ 0.83
CLDN11-204ENST00000477531 TSR2Q969E8 191 aaKnown RBP20.24■□□□□ 0.83
CLDN11-204ENST00000477531 GJA3Q9Y6H8 435 aa20.24■□□□□ 0.83
CLDN11-204ENST00000477531 IRS4O14654 1257 aaPredicted RBP20.23■□□□□ 0.83
CLDN11-204ENST00000477531 EAPPQ56P03 285 aaPredicted RBP20.23■□□□□ 0.83
CLDN11-204ENST00000477531 RTL5Q5HYW3 569 aaPredicted RBP20.23■□□□□ 0.83
CLDN11-204ENST00000477531 KLRG1Q96E93 195 aa20.23■□□□□ 0.83
CLDN11-204ENST00000477531 MYD88Q99836 296 aa20.23■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms