RNA–Protein interactions for RNA: ENST00000477216.1

SKIL-208, Transcript of SKI like proto-oncogene, human

TSL 4

Gene SKIL, Length 554 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SKIL-208	ENST00000477216	CAMTA2	O94983	1202 aa		32.25	■■■□□ 2.75
SKIL-208	ENST00000477216	EIF2S2	P20042	333 aa	Known RBP	32.24	■■■□□ 2.75
SKIL-208	ENST00000477216	CTCF	P49711	727 aa	Predicted RBP	32.24	■■■□□ 2.75
SKIL-208	ENST00000477216	NBPF5P	Q86XG9	351 aa	Predicted RBP	32.24	■■■□□ 2.75
SKIL-208	ENST00000477216	DZIP3	Q86Y13	1208 aa	Known RBP	32.24	■■■□□ 2.75
SKIL-208	ENST00000477216	ELL2	O00472	640 aa	Predicted RBP	32.23	■■■□□ 2.75
SKIL-208	ENST00000477216	NPR1	P16066	1061 aa		32.23	■■■□□ 2.75
SKIL-208	ENST00000477216	PIP4K2A	P48426	406 aa	Predicted RBP	32.23	■■■□□ 2.75
SKIL-208	ENST00000477216	SLFN5	Q08AF3	891 aa		32.23	■■■□□ 2.75
SKIL-208	ENST00000477216	RTKN2	Q8IZC4	609 aa		32.23	■■■□□ 2.75
SKIL-208	ENST00000477216	PASK	Q96RG2	1323 aa		32.23	■■■□□ 2.75
SKIL-208	ENST00000477216	TMEM88B	A6NKF7	163 aa		32.22	■■■□□ 2.75
SKIL-208	ENST00000477216	PNMA8A	Q86V59	439 aa	Predicted RBP	32.22	■■■□□ 2.75
SKIL-208	ENST00000477216	CDCA7L	Q96GN5	454 aa		32.22	■■■□□ 2.75
SKIL-208	ENST00000477216	TAF1D	Q9H5J8	278 aa	Predicted RBP	32.22	■■■□□ 2.75
SKIL-208	ENST00000477216	NBPF26	B4DH59	902 aa		32.21	■■■□□ 2.75
SKIL-208	ENST00000477216	NBPF10	Q6P3W6	841 aa	Known RBP	32.21	■■■□□ 2.75
SKIL-208	ENST00000477216	TPTE2	Q6XPS3	522 aa		32.21	■■■□□ 2.75
SKIL-208	ENST00000477216	NBPF15	Q8N660	670 aa		32.21	■■■□□ 2.75
SKIL-208	ENST00000477216	TSPYL6	Q8N831	410 aa		32.21	■■■□□ 2.75
SKIL-208	ENST00000477216	HDGFL1	Q5TGJ6	251 aa		32.2	■■■□□ 2.75
SKIL-208	ENST00000477216	NECTIN2	Q92692	538 aa		32.2	■■■□□ 2.75
SKIL-208	ENST00000477216	SLX4	Q8IY92	1834 aa		32.2	■■■□□ 2.75
SKIL-208	ENST00000477216	ERBB4	Q15303	1308 aa		32.2	■■■□□ 2.74
SKIL-208	ENST00000477216	FKBP4	Q02790	459 aa	Known RBP eCLIP	32.19	■■■□□ 2.74
SKIL-208	ENST00000477216	EXOSC9	Q06265	439 aa	Known RBP	32.19	■■■□□ 2.74
SKIL-208	ENST00000477216	CCDC24	Q8N4L8	307 aa		32.19	■■■□□ 2.74
SKIL-208	ENST00000477216	HACL1	Q9UJ83	578 aa		32.19	■■■□□ 2.74
SKIL-208	ENST00000477216	ZBED9	Q6R2W3	1325 aa		32.19	■■■□□ 2.74
SKIL-208	ENST00000477216	BCOR	Q6W2J9	1755 aa		32.17	■■■□□ 2.74
SKIL-208	ENST00000477216	ALDH1B1	P30837	517 aa		32.17	■■■□□ 2.74
SKIL-208	ENST00000477216	TWISTNB	Q3B726	338 aa	Predicted RBP	32.17	■■■□□ 2.74
SKIL-208	ENST00000477216	CACNA1S	Q13698	1873 aa		32.15	■■■□□ 2.74
SKIL-208	ENST00000477216	FOXN1	O15353	648 aa		32.15	■■■□□ 2.74
SKIL-208	ENST00000477216	POTEI	P0CG38	1075 aa		32.15	■■■□□ 2.74
SKIL-208	ENST00000477216	POTEJ	P0CG39	1038 aa		32.15	■■■□□ 2.74
SKIL-208	ENST00000477216	TRMT2A	Q8IZ69	625 aa	Known RBP	32.15	■■■□□ 2.74
SKIL-208	ENST00000477216	C7orf43	Q8WVR3	580 aa		32.15	■■■□□ 2.74
SKIL-208	ENST00000477216	KLRG2	A4D1S0	409 aa	Predicted RBP	32.14	■■■□□ 2.74
SKIL-208	ENST00000477216	PDIA6	Q15084	440 aa		32.14	■■■□□ 2.74
SKIL-208	ENST00000477216	CLEC11A	Q9Y240	323 aa		32.14	■■■□□ 2.74
SKIL-208	ENST00000477216	MYL6B	P14649	208 aa		32.13	■■■□□ 2.73
SKIL-208	ENST00000477216	EAPP	Q56P03	285 aa	Predicted RBP	32.13	■■■□□ 2.73
SKIL-208	ENST00000477216	PROSER3	Q2NL68	480 aa		32.12	■■■□□ 2.73
SKIL-208	ENST00000477216	CHMP4A	Q9BY43	222 aa		32.12	■■■□□ 2.73
SKIL-208	ENST00000477216	CHPF2	Q9P2E5	772 aa		32.12	■■■□□ 2.73
SKIL-208	ENST00000477216	ANXA1	P04083	346 aa		32.11	■■■□□ 2.73
SKIL-208	ENST00000477216	EPHX2	P34913	555 aa		32.11	■■■□□ 2.73
SKIL-208	ENST00000477216	VEGFB	P49765	207 aa		32.11	■■■□□ 2.73
SKIL-208	ENST00000477216	GRIPAP1	Q4V328	841 aa		32.11	■■■□□ 2.73
SKIL-208	ENST00000477216	DDX21	Q9NR30	783 aa	Known RBP eCLIP	32.11	■■■□□ 2.73
SKIL-208	ENST00000477216	ITGBL1	O95965	494 aa	Predicted RBP	32.1	■■■□□ 2.73
SKIL-208	ENST00000477216	MAP2K1	Q02750	393 aa	Predicted RBP	32.1	■■■□□ 2.73
SKIL-208	ENST00000477216	CCDC30	Q5VVM6	783 aa		32.1	■■■□□ 2.73
SKIL-208	ENST00000477216	DBF4	Q9UBU7	674 aa	Predicted RBP	32.1	■■■□□ 2.73
SKIL-208	ENST00000477216	VAMP4	O75379	141 aa		32.09	■■■□□ 2.73
SKIL-208	ENST00000477216	GTF2E1	P29083	439 aa	Predicted RBP	32.09	■■■□□ 2.73
SKIL-208	ENST00000477216	CC2D2B	Q6DHV5	1058 aa		32.09	■■■□□ 2.73
SKIL-208	ENST00000477216	LRP10	Q7Z4F1	713 aa		32.09	■■■□□ 2.73
SKIL-208	ENST00000477216	GPC2	Q8N158	579 aa		32.09	■■■□□ 2.73
SKIL-208	ENST00000477216	JDP2	Q8WYK2	163 aa		32.09	■■■□□ 2.73
SKIL-208	ENST00000477216	WBP1L	Q9NX94	342 aa		32.09	■■■□□ 2.73
SKIL-208	ENST00000477216	NIP7	Q9Y221	180 aa	Known RBP eCLIP	32.09	■■■□□ 2.73
SKIL-208	ENST00000477216	DEFB115	Q30KQ5	88 aa		32.08	■■■□□ 2.73
SKIL-208	ENST00000477216	RASSF10	A6NK89	507 aa		32.07	■■■□□ 2.72
SKIL-208	ENST00000477216	IARS	P41252	1262 aa	Known RBP	32.07	■■■□□ 2.72
SKIL-208	ENST00000477216	ZNF277	Q9NRM2	450 aa	Predicted RBP	32.07	■■■□□ 2.72
SKIL-208	ENST00000477216	FZD9	O00144	591 aa		32.06	■■■□□ 2.72
SKIL-208	ENST00000477216	CNTROB	Q8N137	903 aa		32.06	■■■□□ 2.72
SKIL-208	ENST00000477216	NYX	Q9GZU5	481 aa		32.06	■■■□□ 2.72
SKIL-208	ENST00000477216	PSMD1	Q99460	953 aa		32.05	■■■□□ 2.72
SKIL-208	ENST00000477216	TCERG1	O14776	1098 aa	Known RBP	32.04	■■■□□ 2.72
SKIL-208	ENST00000477216	HYPK	Q9NX55	129 aa		32.04	■■■□□ 2.72
SKIL-208	ENST00000477216	ZNF541	Q9H0D2	1346 aa		32.03	■■■□□ 2.72
SKIL-208	ENST00000477216	LMOD1	P29536	600 aa	Predicted RBP	32.03	■■■□□ 2.72
SKIL-208	ENST00000477216	TTLL7	Q6ZT98	887 aa		32.03	■■■□□ 2.72
SKIL-208	ENST00000477216	STK31	Q9BXU1	1019 aa		32.03	■■■□□ 2.72
SKIL-208	ENST00000477216	EIF6	P56537	245 aa	Known RBP	32.02	■■■□□ 2.72
SKIL-208	ENST00000477216	SYNE4	Q8N205	404 aa		32.02	■■■□□ 2.72
SKIL-208	ENST00000477216	XAGE3	Q8WTP9	111 aa		32.02	■■■□□ 2.72
SKIL-208	ENST00000477216	KIF6	Q6ZMV9	814 aa		32.01	■■■□□ 2.71
SKIL-208	ENST00000477216	BEGAIN	Q9BUH8	593 aa		32.01	■■■□□ 2.71
SKIL-208	ENST00000477216	ADAMTSL1	Q8N6G6	1762 aa		32	■■■□□ 2.71
SKIL-208	ENST00000477216	LBX1	P52954	281 aa		32	■■■□□ 2.71
SKIL-208	ENST00000477216	COPS6	Q7L5N1	327 aa		32	■■■□□ 2.71
SKIL-208	ENST00000477216	YTHDC1	Q96MU7	727 aa	Known RBP	32	■■■□□ 2.71
SKIL-208	ENST00000477216	ABT1	Q9ULW3	272 aa	Known RBP	32	■■■□□ 2.71
SKIL-208	ENST00000477216	ECE1	P42892	770 aa		31.99	■■■□□ 2.71
SKIL-208	ENST00000477216	AIMP1	Q12904	312 aa	Known RBP	31.99	■■■□□ 2.71
SKIL-208	ENST00000477216	RNF123	Q5XPI4	1314 aa		31.99	■■■□□ 2.71
SKIL-208	ENST00000477216	MAP3K15	Q6ZN16	1313 aa		31.99	■■■□□ 2.71
SKIL-208	ENST00000477216	WDR33	Q9C0J8	1336 aa	Known RBP	31.99	■■■□□ 2.71
SKIL-208	ENST00000477216	ERVV-1	B6SEH8	477 aa		31.96	■■■□□ 2.71
SKIL-208	ENST00000477216	CT47B1	P0C2W7	299 aa	Predicted RBP	31.96	■■■□□ 2.71
SKIL-208	ENST00000477216	MAP1S	Q66K74	1059 aa	Predicted RBP	31.96	■■■□□ 2.71
SKIL-208	ENST00000477216	TMX4	Q9H1E5	349 aa	Predicted RBP	31.96	■■■□□ 2.71
SKIL-208	ENST00000477216	ZBTB3	Q9H5J0	574 aa		31.96	■■■□□ 2.71
SKIL-208	ENST00000477216	PHAX	Q9H814	394 aa	Known RBP	31.96	■■■□□ 2.71
SKIL-208	ENST00000477216	SLC4A2	P04920	1241 aa		31.95	■■■□□ 2.71
SKIL-208	ENST00000477216	HLF	Q16534	295 aa		31.94	■■■□□ 2.7

Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms