RNA–Protein interactions for RNA: ENST00000477174.1

ACTN4-205, Transcript of actinin alpha 4, humanhuman

TSL 3

Gene ACTN4, Length 544 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-205ENST00000477174 E9PSI1 815 aa17.24■□□□□ 0.35
ACTN4-205ENST00000477174 KSR2Q6VAB6 950 aa17.24■□□□□ 0.35
ACTN4-205ENST00000477174 ZNF784Q8NCA9 323 aaPredicted RBP17.24■□□□□ 0.35
ACTN4-205ENST00000477174 NLRP3Q96P20 1036 aa17.24■□□□□ 0.35
ACTN4-205ENST00000477174 TRMT112Q9UI30 125 aaKnown RBP17.24■□□□□ 0.35
ACTN4-205ENST00000477174 SH3TC1Q8TE82 1336 aa17.23■□□□□ 0.35
ACTN4-205ENST00000477174 CHD4Q14839 1912 aa17.23■□□□□ 0.35
ACTN4-205ENST00000477174 RIC1Q4ADV7 1423 aa17.23■□□□□ 0.35
ACTN4-205ENST00000477174 TCERG1O14776 1098 aaKnown RBP17.23■□□□□ 0.35
ACTN4-205ENST00000477174 HOXA10P31260 410 aaPredicted RBP17.23■□□□□ 0.35
ACTN4-205ENST00000477174 SOGA3Q5TF21 947 aa17.23■□□□□ 0.35
ACTN4-205ENST00000477174 PRPF40BQ6NWY9 871 aaKnown RBP17.23■□□□□ 0.35
ACTN4-205ENST00000477174 ATP5J2-PTCD1G3V325 749 aa17.22■□□□□ 0.35
ACTN4-205ENST00000477174 C21orf2O43822 256 aa17.22■□□□□ 0.35
ACTN4-205ENST00000477174 C7orf43Q8WVR3 580 aa17.22■□□□□ 0.35
ACTN4-205ENST00000477174 RPGRQ92834 1020 aaKnown RBP17.22■□□□□ 0.35
ACTN4-205ENST00000477174 METTL22Q9BUU2 404 aaPredicted RBP17.22■□□□□ 0.35
ACTN4-205ENST00000477174 ABCC12Q96J65 1359 aa17.22■□□□□ 0.35
ACTN4-205ENST00000477174 BRCA1P38398 1863 aaKnown RBP17.21■□□□□ 0.35
ACTN4-205ENST00000477174 PI4KAP2A4QPH2 592 aa17.21■□□□□ 0.35
ACTN4-205ENST00000477174 SLFN5Q08AF3 891 aa17.21■□□□□ 0.35
ACTN4-205ENST00000477174 PI4KAP1Q8N8J0 262 aa17.21■□□□□ 0.35
ACTN4-205ENST00000477174 CCDC191Q8NCU4 936 aa17.21■□□□□ 0.35
ACTN4-205ENST00000477174 ANKRD31Q8N7Z5 1873 aa17.2■□□□□ 0.34
ACTN4-205ENST00000477174 G2E3Q7L622 706 aa17.2■□□□□ 0.34
ACTN4-205ENST00000477174 RBM17Q96I25 401 aaKnown RBP17.2■□□□□ 0.34
ACTN4-205ENST00000477174 CRAMP1Q96RY5 1269 aa17.2■□□□□ 0.34
ACTN4-205ENST00000477174 MYD88Q99836 296 aa17.2■□□□□ 0.34
ACTN4-205ENST00000477174 MAP3K2Q9Y2U5 619 aa17.2■□□□□ 0.34
ACTN4-205ENST00000477174 HCLS1P14317 486 aaPredicted RBP17.19■□□□□ 0.34
ACTN4-205ENST00000477174 HSP90B1P14625 803 aaKnown RBP17.19■□□□□ 0.34
ACTN4-205ENST00000477174 FLIIQ13045 1269 aa17.19■□□□□ 0.34
ACTN4-205ENST00000477174 C9orf131Q5VYM1 1079 aa17.19■□□□□ 0.34
ACTN4-205ENST00000477174 SYNE4Q8N205 404 aa17.19■□□□□ 0.34
ACTN4-205ENST00000477174 FAM89AQ96GI7 184 aa17.19■□□□□ 0.34
ACTN4-205ENST00000477174 ZNF219Q9P2Y4 722 aaPredicted RBP17.19■□□□□ 0.34
ACTN4-205ENST00000477174 LMNB1P20700 586 aa17.18■□□□□ 0.34
ACTN4-205ENST00000477174 NEXNQ0ZGT2 675 aa17.18■□□□□ 0.34
ACTN4-205ENST00000477174 C3orf67Q6ZVT6 689 aa17.18■□□□□ 0.34
ACTN4-205ENST00000477174 TRMT2AQ8IZ69 625 aaKnown RBP17.18■□□□□ 0.34
ACTN4-205ENST00000477174 ZBTB38Q8NAP3 1195 aaPredicted RBP17.18■□□□□ 0.34
ACTN4-205ENST00000477174 ARFGEF1Q9Y6D6 1849 aa17.18■□□□□ 0.34
ACTN4-205ENST00000477174 ADCY9O60503 1353 aa17.17■□□□□ 0.34
ACTN4-205ENST00000477174 NFKBIEO00221 500 aa17.17■□□□□ 0.34
ACTN4-205ENST00000477174 FKBP5Q13451 457 aaPredicted RBP17.17■□□□□ 0.34
ACTN4-205ENST00000477174 CC2D2BQ6DHV5 1058 aa17.17■□□□□ 0.34
ACTN4-205ENST00000477174 RTKN2Q8IZC4 609 aa17.17■□□□□ 0.34
ACTN4-205ENST00000477174 ZNF428Q96B54 188 aa17.17■□□□□ 0.34
ACTN4-205ENST00000477174 CDCA7LQ96GN5 454 aa17.17■□□□□ 0.34
ACTN4-205ENST00000477174 CWC25Q9NXE8 425 aaPredicted RBP17.17■□□□□ 0.34
ACTN4-205ENST00000477174 DLEC1Q9Y238 1755 aa17.16■□□□□ 0.34
ACTN4-205ENST00000477174 GRIPAP1Q4V328 841 aa17.16■□□□□ 0.34
ACTN4-205ENST00000477174 CCDC93Q567U6 631 aa17.16■□□□□ 0.34
ACTN4-205ENST00000477174 RNF181Q9P0P0 153 aa17.16■□□□□ 0.34
ACTN4-205ENST00000477174 LTBP3Q9NS15 1303 aa17.16■□□□□ 0.34
ACTN4-205ENST00000477174 IRS4O14654 1257 aaPredicted RBP17.15■□□□□ 0.34
ACTN4-205ENST00000477174 BBOX1O75936 387 aa17.15■□□□□ 0.34
ACTN4-205ENST00000477174 PCCAP05165 728 aaPredicted RBP17.15■□□□□ 0.34
ACTN4-205ENST00000477174 IGKV5-2P06315 115 aa17.15■□□□□ 0.34
ACTN4-205ENST00000477174 RASSF7Q02833 373 aa17.15■□□□□ 0.34
ACTN4-205ENST00000477174 SF3B3Q15393 1217 aaKnown RBP17.15■□□□□ 0.34
ACTN4-205ENST00000477174 TAOK3Q9H2K8 898 aa17.15■□□□□ 0.34
ACTN4-205ENST00000477174 RTL5Q5HYW3 569 aaPredicted RBP17.14■□□□□ 0.33
ACTN4-205ENST00000477174 DDX46Q7L014 1031 aaKnown RBP17.14■□□□□ 0.33
ACTN4-205ENST00000477174 DNAAF4Q8WXU2 420 aa17.14■□□□□ 0.33
ACTN4-205ENST00000477174 NEURL1BA8MQ27 555 aa17.13■□□□□ 0.33
ACTN4-205ENST00000477174 CT47B1P0C2W7 299 aaPredicted RBP17.13■□□□□ 0.33
ACTN4-205ENST00000477174 LINS1Q8NG48 757 aa17.13■□□□□ 0.33
ACTN4-205ENST00000477174 TMX4Q9H1E5 349 aaPredicted RBP17.13■□□□□ 0.33
ACTN4-205ENST00000477174 GPBP1L1Q9HC44 474 aaPredicted RBP17.13■□□□□ 0.33
ACTN4-205ENST00000477174 ZC3H4Q9UPT8 1303 aaKnown RBP17.13■□□□□ 0.33
ACTN4-205ENST00000477174 COL11A2P13942 1736 aaPredicted RBP17.13■□□□□ 0.33
ACTN4-205ENST00000477174 SLX4Q8IY92 1834 aa17.12■□□□□ 0.33
ACTN4-205ENST00000477174 PRELPP51888 382 aa17.12■□□□□ 0.33
ACTN4-205ENST00000477174 PPEF1O14829 653 aaPredicted RBP17.11■□□□□ 0.33
ACTN4-205ENST00000477174 PDE8AO60658 829 aa17.11■□□□□ 0.33
ACTN4-205ENST00000477174 FKBP4Q02790 459 aaKnown RBP eCLIP17.11■□□□□ 0.33
ACTN4-205ENST00000477174 GRAPQ13588 217 aa17.11■□□□□ 0.33
ACTN4-205ENST00000477174 OLFM4Q6UX06 510 aa17.11■□□□□ 0.33
ACTN4-205ENST00000477174 GRAPLQ8TC17 118 aaPredicted RBP17.11■□□□□ 0.33
ACTN4-205ENST00000477174 ATP6V0A2Q9Y487 856 aa17.11■□□□□ 0.33
ACTN4-205ENST00000477174 ABCC4O15439 1325 aa17.11■□□□□ 0.33
ACTN4-205ENST00000477174 ANKRD36CQ5JPF3 1778 aa17.1■□□□□ 0.33
ACTN4-205ENST00000477174 H7C1W4 665 aa17.1■□□□□ 0.33
ACTN4-205ENST00000477174 GCKRQ14397 625 aa17.1■□□□□ 0.33
ACTN4-205ENST00000477174 CWF19L2Q2TBE0 894 aaKnown RBP17.1■□□□□ 0.33
ACTN4-205ENST00000477174 ALDH1L2Q3SY69 923 aa17.1■□□□□ 0.33
ACTN4-205ENST00000477174 TMC4Q7Z404 712 aa17.1■□□□□ 0.33
ACTN4-205ENST00000477174 SP8Q8IXZ3 490 aa17.1■□□□□ 0.33
ACTN4-205ENST00000477174 MRPL50Q8N5N7 158 aaKnown RBP17.1■□□□□ 0.33
ACTN4-205ENST00000477174 PSMD1Q99460 953 aa17.1■□□□□ 0.33
ACTN4-205ENST00000477174 CDHR2Q9BYE9 1310 aa17.1■□□□□ 0.33
ACTN4-205ENST00000477174 ZNF526Q8TF50 670 aaPredicted RBP17.09■□□□□ 0.33
ACTN4-205ENST00000477174 SSH1Q8WYL5 1049 aa17.09■□□□□ 0.33
ACTN4-205ENST00000477174 TNRC6CQ9HCJ0 1690 aaKnown RBP17.09■□□□□ 0.33
ACTN4-205ENST00000477174 CACNA1FO60840 1977 aa17.08■□□□□ 0.33
ACTN4-205ENST00000477174 ARFGEF2Q9Y6D5 1785 aa17.08■□□□□ 0.33
ACTN4-205ENST00000477174 F6X3S4 739 aa17.08■□□□□ 0.32
ACTN4-205ENST00000477174 HNRNPUQ00839 825 aaKnown RBP eCLIP17.08■□□□□ 0.32
ACTN4-205ENST00000477174 CCDC152Q4G0S7 254 aa17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms