RNA–Protein interactions for RNA: ENST00000477160.1

GFRA4-203, Transcript of GDNF family receptor alpha 4, humanhuman

TSL 1 (best)

Gene GFRA4, Length 549 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA4-203ENST00000477160 RBM46Q8TBY0 533 aaKnown RBP31.98■■■□□ 2.71
GFRA4-203ENST00000477160 UTP14AQ9BVJ6 771 aaKnown RBP31.98■■■□□ 2.71
GFRA4-203ENST00000477160 TNRC6CQ9HCJ0 1690 aaKnown RBP31.97■■■□□ 2.71
GFRA4-203ENST00000477160 DPY19L2Q6NUT2 758 aa31.97■■■□□ 2.71
GFRA4-203ENST00000477160 RPGRQ92834 1020 aaKnown RBP31.97■■■□□ 2.71
GFRA4-203ENST00000477160 RNF123Q5XPI4 1314 aa31.97■■■□□ 2.71
GFRA4-203ENST00000477160 HOXA10P31260 410 aaPredicted RBP31.96■■■□□ 2.71
GFRA4-203ENST00000477160 CACNA1SQ13698 1873 aa31.96■■■□□ 2.71
GFRA4-203ENST00000477160 RTKN2Q8IZC4 609 aa31.96■■■□□ 2.71
GFRA4-203ENST00000477160 TIAM2Q8IVF5 1701 aa31.95■■■□□ 2.71
GFRA4-203ENST00000477160 TCIRG1Q13488 830 aa31.95■■■□□ 2.71
GFRA4-203ENST00000477160 FKBP4Q02790 459 aaKnown RBP eCLIP31.94■■■□□ 2.7
GFRA4-203ENST00000477160 SLC10A5Q5PT55 438 aa31.94■■■□□ 2.7
GFRA4-203ENST00000477160 HYPKQ9NX55 129 aa31.94■■■□□ 2.7
GFRA4-203ENST00000477160 CCDC88AQ3V6T2 1871 aa31.93■■■□□ 2.7
GFRA4-203ENST00000477160 NLRP10Q86W26 655 aa31.93■■■□□ 2.7
GFRA4-203ENST00000477160 PLBD2Q8NHP8 589 aa31.93■■■□□ 2.7
GFRA4-203ENST00000477160 NLRP3Q96P20 1036 aa31.93■■■□□ 2.7
GFRA4-203ENST00000477160 VEGFAP15692 232 aaPredicted RBP31.92■■■□□ 2.7
GFRA4-203ENST00000477160 CC2D2BQ6DHV5 1058 aa31.92■■■□□ 2.7
GFRA4-203ENST00000477160 RBM17Q96I25 401 aaKnown RBP31.92■■■□□ 2.7
GFRA4-203ENST00000477160 MRS2Q9HD23 443 aa31.92■■■□□ 2.7
GFRA4-203ENST00000477160 CCDC27Q2M243 656 aa31.91■■■□□ 2.7
GFRA4-203ENST00000477160 ANKRD13DQ6ZTN6 518 aa31.91■■■□□ 2.7
GFRA4-203ENST00000477160 CRAMP1Q96RY5 1269 aa31.91■■■□□ 2.7
GFRA4-203ENST00000477160 FSTL1Q12841 308 aa31.9■■■□□ 2.7
GFRA4-203ENST00000477160 OLFM4Q6UX06 510 aa31.9■■■□□ 2.7
GFRA4-203ENST00000477160 DICER1Q9UPY3 1922 aaKnown RBP31.9■■■□□ 2.7
GFRA4-203ENST00000477160 CHMP4AQ9BY43 222 aa31.89■■■□□ 2.7
GFRA4-203ENST00000477160 GRIPAP1Q4V328 841 aa31.88■■■□□ 2.69
GFRA4-203ENST00000477160 NCBP3Q53F19 620 aaKnown RBP31.87■■■□□ 2.69
GFRA4-203ENST00000477160 C3orf67Q6ZVT6 689 aa31.87■■■□□ 2.69
GFRA4-203ENST00000477160 TRMT112Q9UI30 125 aaKnown RBP31.87■■■□□ 2.69
GFRA4-203ENST00000477160 ANKRD36CQ5JPF3 1778 aa31.86■■■□□ 2.69
GFRA4-203ENST00000477160 SH3TC1Q8TE82 1336 aa31.86■■■□□ 2.69
GFRA4-203ENST00000477160 APLP1P51693 650 aa31.86■■■□□ 2.69
GFRA4-203ENST00000477160 PSMD1Q99460 953 aa31.86■■■□□ 2.69
GFRA4-203ENST00000477160 ZNF277Q9NRM2 450 aaPredicted RBP31.86■■■□□ 2.69
GFRA4-203ENST00000477160 ELL2O00472 640 aaPredicted RBP31.85■■■□□ 2.69
GFRA4-203ENST00000477160 SNED1Q8TER0 1413 aa31.84■■■□□ 2.69
GFRA4-203ENST00000477160 WWC1Q8IX03 1113 aa31.84■■■□□ 2.69
GFRA4-203ENST00000477160 SYNE4Q8N205 404 aa31.84■■■□□ 2.69
GFRA4-203ENST00000477160 C8orf58Q8NAV2 365 aa31.84■■■□□ 2.69
GFRA4-203ENST00000477160 SMC1BQ8NDV3 1235 aa31.84■■■□□ 2.69
GFRA4-203ENST00000477160 PPEF1O14829 653 aaPredicted RBP31.83■■■□□ 2.69
GFRA4-203ENST00000477160 ISCA1Q9BUE6 129 aa31.83■■■□□ 2.69
GFRA4-203ENST00000477160 WDR90Q96KV7 1748 aa31.83■■■□□ 2.69
GFRA4-203ENST00000477160 POTECB2RU33 542 aa31.82■■■□□ 2.68
GFRA4-203ENST00000477160 IARSP41252 1262 aaKnown RBP31.82■■■□□ 2.68
GFRA4-203ENST00000477160 HCLS1P14317 486 aaPredicted RBP31.81■■■□□ 2.68
GFRA4-203ENST00000477160 GOLGA2Q08379 1002 aa31.81■■■□□ 2.68
GFRA4-203ENST00000477160 DDNO94850 711 aaPredicted RBP31.8■■■□□ 2.68
GFRA4-203ENST00000477160 CCDC30Q5VVM6 783 aa31.8■■■□□ 2.68
GFRA4-203ENST00000477160 TMX4Q9H1E5 349 aaPredicted RBP31.8■■■□□ 2.68
GFRA4-203ENST00000477160 TRIM28Q13263 835 aaKnown RBP31.79■■■□□ 2.68
GFRA4-203ENST00000477160 RIC3Q7Z5B4 369 aa31.79■■■□□ 2.68
GFRA4-203ENST00000477160 IL16Q14005 1332 aa31.78■■■□□ 2.68
GFRA4-203ENST00000477160 PHAXQ9H814 394 aaKnown RBP31.78■■■□□ 2.68
GFRA4-203ENST00000477160 ABCC4O15439 1325 aa31.77■■■□□ 2.68
GFRA4-203ENST00000477160 ATP5J2-PTCD1G3V325 749 aa31.77■■■□□ 2.68
GFRA4-203ENST00000477160 BBOX1O75936 387 aa31.77■■■□□ 2.68
GFRA4-203ENST00000477160 TSR2Q969E8 191 aaKnown RBP31.77■■■□□ 2.68
GFRA4-203ENST00000477160 ATP6V0A2Q9Y487 856 aa31.77■■■□□ 2.68
GFRA4-203ENST00000477160 TSPYL6Q8N831 410 aa31.76■■■□□ 2.67
GFRA4-203ENST00000477160 JDP2Q8WYK2 163 aa31.76■■■□□ 2.67
GFRA4-203ENST00000477160 L3MBTL3Q96JM7 780 aaPredicted RBP31.76■■■□□ 2.67
GFRA4-203ENST00000477160 FZD9O00144 591 aa31.75■■■□□ 2.67
GFRA4-203ENST00000477160 TCERG1O14776 1098 aaKnown RBP31.75■■■□□ 2.67
GFRA4-203ENST00000477160 DDX46Q7L014 1031 aaKnown RBP31.75■■■□□ 2.67
GFRA4-203ENST00000477160 IQCA1LA6NCM1 817 aa31.74■■■□□ 2.67
GFRA4-203ENST00000477160 FAM89AQ96GI7 184 aa31.74■■■□□ 2.67
GFRA4-203ENST00000477160 DDX58O95786 925 aaKnown RBP31.73■■■□□ 2.67
GFRA4-203ENST00000477160 ZNF541Q9H0D2 1346 aa31.73■■■□□ 2.67
GFRA4-203ENST00000477160 GRAPQ13588 217 aa31.72■■■□□ 2.67
GFRA4-203ENST00000477160 GRAPLQ8TC17 118 aaPredicted RBP31.72■■■□□ 2.67
GFRA4-203ENST00000477160 SP8Q8IXZ3 490 aa31.71■■■□□ 2.67
GFRA4-203ENST00000477160 ZNF428Q96B54 188 aa31.71■■■□□ 2.67
GFRA4-203ENST00000477160 SF3B3Q15393 1217 aaKnown RBP31.7■■■□□ 2.67
GFRA4-203ENST00000477160 TMC4Q7Z404 712 aa31.7■■■□□ 2.67
GFRA4-203ENST00000477160 WDR63Q8IWG1 891 aa31.7■■■□□ 2.67
GFRA4-203ENST00000477160 STK31Q9BXU1 1019 aa31.7■■■□□ 2.67
GFRA4-203ENST00000477160 VPS33BQ9H267 617 aa31.7■■■□□ 2.67
GFRA4-203ENST00000477160 CEP350Q5VT06 3117 aa31.7■■■□□ 2.66
GFRA4-203ENST00000477160 LAMB2P55268 1798 aa31.69■■■□□ 2.66
GFRA4-203ENST00000477160 TWISTNBQ3B726 338 aaPredicted RBP31.69■■■□□ 2.66
GFRA4-203ENST00000477160 SLC51AQ86UW1 340 aa31.69■■■□□ 2.66
GFRA4-203ENST00000477160 LARGE2Q8N3Y3 721 aa31.69■■■□□ 2.66
GFRA4-203ENST00000477160 SUPT20HQ8NEM7 779 aa31.69■■■□□ 2.66
GFRA4-203ENST00000477160 HSP90B1P14625 803 aaKnown RBP31.68■■■□□ 2.66
GFRA4-203ENST00000477160 ZBTB38Q8NAP3 1195 aaPredicted RBP31.68■■■□□ 2.66
GFRA4-203ENST00000477160 MYD88Q99836 296 aa31.68■■■□□ 2.66
GFRA4-203ENST00000477160 IRS4O14654 1257 aaPredicted RBP31.67■■■□□ 2.66
GFRA4-203ENST00000477160 EIF6P56537 245 aaKnown RBP31.67■■■□□ 2.66
GFRA4-203ENST00000477160 GPC2Q8N158 579 aa31.67■■■□□ 2.66
GFRA4-203ENST00000477160 CCDC191Q8NCU4 936 aa31.67■■■□□ 2.66
GFRA4-203ENST00000477160 METTL22Q9BUU2 404 aaPredicted RBP31.67■■■□□ 2.66
GFRA4-203ENST00000477160 RTFDC1Q9BY42 306 aaPredicted RBP31.67■■■□□ 2.66
GFRA4-203ENST00000477160 RTL5Q5HYW3 569 aaPredicted RBP31.66■■■□□ 2.66
GFRA4-203ENST00000477160 DNAJC5GQ8N7S2 189 aa31.66■■■□□ 2.66
GFRA4-203ENST00000477160 TAF1DQ9H5J8 278 aaPredicted RBP31.66■■■□□ 2.66
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms