RNA–Protein interactions for RNA: ENST00000477152.5

BRCA1-214, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,980 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-214ENST00000477152 LINC00116Q8NCU8 138 aa9.84□□□□□ -0.83
BRCA1-214ENST00000477152 RBM46Q8TBY0 533 aaKnown RBP9.84□□□□□ -0.83
BRCA1-214ENST00000477152 ATG3Q9NT62 314 aa9.84□□□□□ -0.83
BRCA1-214ENST00000477152 PROCA1Q8NCQ7 364 aaPredicted RBP9.83□□□□□ -0.84
BRCA1-214ENST00000477152 CCER1Q8TC90 406 aaPredicted RBP9.83□□□□□ -0.84
BRCA1-214ENST00000477152 PARP3Q9Y6F1 533 aa9.83□□□□□ -0.84
BRCA1-214ENST00000477152 CNTNAP4Q9C0A0 1308 aa9.83□□□□□ -0.84
BRCA1-214ENST00000477152 HSPA5P11021 654 aaKnown RBP9.83□□□□□ -0.84
BRCA1-214ENST00000477152 ATP10DQ9P241 1426 aa9.83□□□□□ -0.84
BRCA1-214ENST00000477152 RPS6KA4O75676 772 aa9.82□□□□□ -0.84
BRCA1-214ENST00000477152 MMP10P09238 476 aa9.82□□□□□ -0.84
BRCA1-214ENST00000477152 PNMA3Q9UL41 463 aa9.82□□□□□ -0.84
BRCA1-214ENST00000477152 TRIM6-TRIM34B2RNG4 842 aa9.81□□□□□ -0.84
BRCA1-214ENST00000477152 ITPK1Q13572 414 aa9.81□□□□□ -0.84
BRCA1-214ENST00000477152 POTEEQ6S8J3 1075 aa9.81□□□□□ -0.84
BRCA1-214ENST00000477152 GOPCQ9HD26 462 aa9.81□□□□□ -0.84
BRCA1-214ENST00000477152 TATDN2Q93075 761 aa9.81□□□□□ -0.84
BRCA1-214ENST00000477152 KIF13BQ9NQT8 1826 aa9.81□□□□□ -0.84
BRCA1-214ENST00000477152 COL5A3P25940 1745 aaPredicted RBP9.8□□□□□ -0.84
BRCA1-214ENST00000477152 MARVELD3Q96A59 401 aa9.8□□□□□ -0.84
BRCA1-214ENST00000477152 KDRP35968 1356 aa9.79□□□□□ -0.84
BRCA1-214ENST00000477152 SH3D19Q5HYK7 790 aa9.79□□□□□ -0.84
BRCA1-214ENST00000477152 AKAP4Q5JQC9 854 aa9.79□□□□□ -0.84
BRCA1-214ENST00000477152 VARS2Q5ST30 1063 aaKnown RBP9.79□□□□□ -0.84
BRCA1-214ENST00000477152 LHX8Q68G74 356 aa9.79□□□□□ -0.84
BRCA1-214ENST00000477152 SULT6B1Q6IMI4 303 aa9.79□□□□□ -0.84
BRCA1-214ENST00000477152 PCMTD1Q96MG8 357 aaPredicted RBP9.79□□□□□ -0.84
BRCA1-214ENST00000477152 BCS1LQ9Y276 419 aa9.79□□□□□ -0.84
BRCA1-214ENST00000477152 SCN11AQ9UI33 1791 aa9.78□□□□□ -0.84
BRCA1-214ENST00000477152 C4AP0C0L4 1744 aa9.78□□□□□ -0.84
BRCA1-214ENST00000477152 CICQ96RK0 1608 aaPredicted RBP9.78□□□□□ -0.84
BRCA1-214ENST00000477152 ZPR1O75312 459 aa9.78□□□□□ -0.84
BRCA1-214ENST00000477152 MYSM1Q5VVJ2 828 aa9.78□□□□□ -0.84
BRCA1-214ENST00000477152 NFATC2IPQ8NCF5 419 aa9.78□□□□□ -0.84
BRCA1-214ENST00000477152 ADCY9O60503 1353 aa9.78□□□□□ -0.84
BRCA1-214ENST00000477152 PTCD1O75127 700 aaKnown RBP9.77□□□□□ -0.84
BRCA1-214ENST00000477152 ARHGAP27Q6ZUM4 889 aa9.77□□□□□ -0.84
BRCA1-214ENST00000477152 KIAA1468Q9P260 1216 aa9.77□□□□□ -0.84
BRCA1-214ENST00000477152 DDX11L8A8MPP1 907 aa9.77□□□□□ -0.85
BRCA1-214ENST00000477152 ST18O60284 1047 aa9.77□□□□□ -0.85
BRCA1-214ENST00000477152 GYS1P13807 737 aa9.77□□□□□ -0.85
BRCA1-214ENST00000477152 HSPA6P17066 643 aa9.77□□□□□ -0.85
BRCA1-214ENST00000477152 CRKLP46109 303 aaKnown RBP9.77□□□□□ -0.85
BRCA1-214ENST00000477152 SKIV2LQ15477 1246 aaKnown RBP9.77□□□□□ -0.85
BRCA1-214ENST00000477152 NPM2Q86SE8 214 aaKnown RBP9.77□□□□□ -0.85
BRCA1-214ENST00000477152 C16orf71Q8IYS4 520 aaPredicted RBP9.77□□□□□ -0.85
BRCA1-214ENST00000477152 ZNF526Q8TF50 670 aaPredicted RBP9.77□□□□□ -0.85
BRCA1-214ENST00000477152 TBC1D2Q9BYX2 928 aa9.77□□□□□ -0.85
BRCA1-214ENST00000477152 PIM2Q9P1W9 311 aa9.77□□□□□ -0.85
BRCA1-214ENST00000477152 N4BP2Q86UW6 1770 aaPredicted RBP9.77□□□□□ -0.85
BRCA1-214ENST00000477152 C10orf71Q711Q0 1435 aa9.76□□□□□ -0.85
BRCA1-214ENST00000477152 DMRTA1Q5VZB9 504 aa9.76□□□□□ -0.85
BRCA1-214ENST00000477152 PACS2Q86VP3 889 aa9.76□□□□□ -0.85
BRCA1-214ENST00000477152 AMIGO3Q86WK7 504 aa9.76□□□□□ -0.85
BRCA1-214ENST00000477152 ZBED2Q9BTP6 218 aa9.76□□□□□ -0.85
BRCA1-214ENST00000477152 KDM6AO15550 1401 aaPredicted RBP9.76□□□□□ -0.85
BRCA1-214ENST00000477152 ARFGEF1Q9Y6D6 1849 aa9.76□□□□□ -0.85
BRCA1-214ENST00000477152 DIAPH1O60610 1272 aaKnown RBP9.75□□□□□ -0.85
BRCA1-214ENST00000477152 IL13P35225 146 aa9.75□□□□□ -0.85
BRCA1-214ENST00000477152 SLC52A2Q9HAB3 445 aa9.75□□□□□ -0.85
BRCA1-214ENST00000477152 PXDNLA1KZ92 1463 aa9.75□□□□□ -0.85
BRCA1-214ENST00000477152 A0A0G2JLW4 131 aa9.75□□□□□ -0.85
BRCA1-214ENST00000477152 NBPF26B4DH59 902 aa9.75□□□□□ -0.85
BRCA1-214ENST00000477152 DALRD3Q5D0E6 543 aaKnown RBP9.75□□□□□ -0.85
BRCA1-214ENST00000477152 SMIM5Q71RC9 77 aa9.75□□□□□ -0.85
BRCA1-214ENST00000477152 TTC5Q8N0Z6 440 aa9.75□□□□□ -0.85
BRCA1-214ENST00000477152 TMEM134Q9H6X4 195 aa9.75□□□□□ -0.85
BRCA1-214ENST00000477152 KDM2BQ8NHM5 1336 aa9.75□□□□□ -0.85
BRCA1-214ENST00000477152 VIRMAQ69YN4 1812 aaKnown RBP9.75□□□□□ -0.85
BRCA1-214ENST00000477152 A0A087WZG4 1122 aa9.74□□□□□ -0.85
BRCA1-214ENST00000477152 DPEP1P16444 411 aa9.74□□□□□ -0.85
BRCA1-214ENST00000477152 APLP1P51693 650 aa9.74□□□□□ -0.85
BRCA1-214ENST00000477152 AEBP1Q8IUX7 1158 aa9.74□□□□□ -0.85
BRCA1-214ENST00000477152 TEX13AQ9BXU3 409 aaPredicted RBP9.74□□□□□ -0.85
BRCA1-214ENST00000477152 RSPH6AQ9H0K4 717 aa9.74□□□□□ -0.85
BRCA1-214ENST00000477152 SEPT9Q9UHD8 586 aaPredicted RBP9.74□□□□□ -0.85
BRCA1-214ENST00000477152 WWC3Q9ULE0 1092 aa9.74□□□□□ -0.85
BRCA1-214ENST00000477152 USP42Q9H9J4 1324 aaKnown RBP9.74□□□□□ -0.85
BRCA1-214ENST00000477152 MYH14Q7Z406 1995 aaKnown RBP9.74□□□□□ -0.85
BRCA1-214ENST00000477152 TOMM70O94826 608 aa9.74□□□□□ -0.85
BRCA1-214ENST00000477152 STARD3NLO95772 234 aa9.74□□□□□ -0.85
BRCA1-214ENST00000477152 DNAJB2P25686 324 aa9.74□□□□□ -0.85
BRCA1-214ENST00000477152 SLC4A9Q96Q91 983 aa9.74□□□□□ -0.85
BRCA1-214ENST00000477152 ZMYND15Q9H091 742 aa9.74□□□□□ -0.85
BRCA1-214ENST00000477152 LIMD1Q9UGP4 676 aa9.74□□□□□ -0.85
BRCA1-214ENST00000477152 PDZRN3Q9UPQ7 1066 aa9.74□□□□□ -0.85
BRCA1-214ENST00000477152 RNMTO43148 476 aaKnown RBP9.73□□□□□ -0.85
BRCA1-214ENST00000477152 CD46P15529 392 aa9.73□□□□□ -0.85
BRCA1-214ENST00000477152 GAS2L2Q8NHY3 880 aa9.73□□□□□ -0.85
BRCA1-214ENST00000477152 SPIRE2Q8WWL2 714 aa9.73□□□□□ -0.85
BRCA1-214ENST00000477152 CFAP53Q96M91 514 aa9.73□□□□□ -0.85
BRCA1-214ENST00000477152 BRCA1P38398 1863 aaKnown RBP9.73□□□□□ -0.85
BRCA1-214ENST00000477152 TJP1Q07157 1748 aa9.72□□□□□ -0.85
BRCA1-214ENST00000477152 TEFQ10587 303 aa9.72□□□□□ -0.85
BRCA1-214ENST00000477152 KIAA1551Q9HCM1 1747 aa9.72□□□□□ -0.85
BRCA1-214ENST00000477152 NARFQ9UHQ1 456 aa9.72□□□□□ -0.85
BRCA1-214ENST00000477152 ZC3H4Q9UPT8 1303 aaKnown RBP9.71□□□□□ -0.86
BRCA1-214ENST00000477152 FAM205CA6NFA0 338 aa9.71□□□□□ -0.86
BRCA1-214ENST00000477152 HMOX1P09601 288 aa9.71□□□□□ -0.86
BRCA1-214ENST00000477152 EMP3P54852 163 aa9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 98.9 ms