RNA–Protein interactions for RNA: ENST00000477085.1

COL4A6-206, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best)

Gene COL4A6, Length 1,784 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-206ENST00000477085 POTEAQ6S8J7 498 aa17.93■□□□□ 0.46
COL4A6-206ENST00000477085 AMIGO3Q86WK7 504 aa17.93■□□□□ 0.46
COL4A6-206ENST00000477085 ZNF34Q8IZ26 560 aa17.93■□□□□ 0.46
COL4A6-206ENST00000477085 SYNE4Q8N205 404 aa17.93■□□□□ 0.46
COL4A6-206ENST00000477085 LRRCC1Q9C099 1032 aa17.93■□□□□ 0.46
COL4A6-206ENST00000477085 LRRC4BQ9NT99 713 aa17.93■□□□□ 0.46
COL4A6-206ENST00000477085 LY75O60449 1722 aa17.92■□□□□ 0.46
COL4A6-206ENST00000477085 UBN2Q6ZU65 1347 aa17.92■□□□□ 0.46
COL4A6-206ENST00000477085 RFX5P48382 616 aaPredicted RBP17.92■□□□□ 0.46
COL4A6-206ENST00000477085 KLHDC4Q8TBB5 520 aa17.92■□□□□ 0.46
COL4A6-206ENST00000477085 RC3H1Q5TC82 1133 aaKnown RBP17.91■□□□□ 0.46
COL4A6-206ENST00000477085 FAM89AQ96GI7 184 aa17.91■□□□□ 0.46
COL4A6-206ENST00000477085 SALL3Q9BXA9 1300 aa17.91■□□□□ 0.46
COL4A6-206ENST00000477085 RAB11FIP3O75154 756 aa17.91■□□□□ 0.46
COL4A6-206ENST00000477085 HSP90AB3PQ58FF7 597 aa17.91■□□□□ 0.46
COL4A6-206ENST00000477085 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.91■□□□□ 0.46
COL4A6-206ENST00000477085 PCCAP05165 728 aaPredicted RBP17.9■□□□□ 0.46
COL4A6-206ENST00000477085 LMBR1LQ6UX01 489 aa17.9■□□□□ 0.46
COL4A6-206ENST00000477085 NPM2Q86SE8 214 aaKnown RBP17.9■□□□□ 0.46
COL4A6-206ENST00000477085 ZBTB38Q8NAP3 1195 aaPredicted RBP17.9■□□□□ 0.46
COL4A6-206ENST00000477085 RHPN1Q8TCX5 695 aa17.9■□□□□ 0.46
COL4A6-206ENST00000477085 IL1RAPL2Q9NP60 686 aa17.9■□□□□ 0.46
COL4A6-206ENST00000477085 NUP98P52948 1817 aa17.9■□□□□ 0.46
COL4A6-206ENST00000477085 RPS6KA4O75676 772 aa17.89■□□□□ 0.45
COL4A6-206ENST00000477085 SEC24BO95487 1268 aa17.89■□□□□ 0.45
COL4A6-206ENST00000477085 GSPT1P15170 499 aaKnown RBP17.89■□□□□ 0.45
COL4A6-206ENST00000477085 PTPN12Q05209 780 aaKnown RBP17.88■□□□□ 0.45
COL4A6-206ENST00000477085 PROM2Q8N271 834 aa17.88■□□□□ 0.45
COL4A6-206ENST00000477085 ZBTB47Q9UFB7 747 aaPredicted RBP17.88■□□□□ 0.45
COL4A6-206ENST00000477085 ANKRD36CQ5JPF3 1778 aa17.87■□□□□ 0.45
COL4A6-206ENST00000477085 SASH1O94885 1247 aa17.87■□□□□ 0.45
COL4A6-206ENST00000477085 BMP2KLQ5H9B9 411 aa17.87■□□□□ 0.45
COL4A6-206ENST00000477085 SUSD4Q5VX71 490 aa17.87■□□□□ 0.45
COL4A6-206ENST00000477085 KIF1BPQ96EK5 621 aa17.87■□□□□ 0.45
COL4A6-206ENST00000477085 BCL2L12Q9HB09 334 aa17.87■□□□□ 0.45
COL4A6-206ENST00000477085 COPRSQ9NQ92 184 aa17.87■□□□□ 0.45
COL4A6-206ENST00000477085 GNPATO15228 680 aa17.86■□□□□ 0.45
COL4A6-206ENST00000477085 PDE1AP54750 535 aa17.86■□□□□ 0.45
COL4A6-206ENST00000477085 TAF1LQ8IZX4 1826 aa17.86■□□□□ 0.45
COL4A6-206ENST00000477085 HSP90AB4PQ58FF6 505 aa17.86■□□□□ 0.45
COL4A6-206ENST00000477085 TSHZ3Q63HK5 1081 aa17.86■□□□□ 0.45
COL4A6-206ENST00000477085 PLA2G12BQ9BX93 195 aa17.86■□□□□ 0.45
COL4A6-206ENST00000477085 SIL1Q9H173 461 aa17.86■□□□□ 0.45
COL4A6-206ENST00000477085 OSBPL3Q9H4L5 887 aa17.86■□□□□ 0.45
COL4A6-206ENST00000477085 TTC22Q5TAA0 569 aa17.85■□□□□ 0.45
COL4A6-206ENST00000477085 NUTM1Q86Y26 1132 aa17.85■□□□□ 0.45
COL4A6-206ENST00000477085 TRMT112Q9UI30 125 aaKnown RBP17.85■□□□□ 0.45
COL4A6-206ENST00000477085 CDHR2Q9BYE9 1310 aa17.85■□□□□ 0.45
COL4A6-206ENST00000477085 CSF1RP07333 972 aa17.84■□□□□ 0.45
COL4A6-206ENST00000477085 SRP68Q9UHB9 627 aaKnown RBP17.84■□□□□ 0.45
COL4A6-206ENST00000477085 C4BP0C0L5 1744 aa17.84■□□□□ 0.45
COL4A6-206ENST00000477085 OS9Q13438 667 aaPredicted RBP17.84■□□□□ 0.45
COL4A6-206ENST00000477085 ARHGEF1Q92888 912 aaKnown RBP17.84■□□□□ 0.45
COL4A6-206ENST00000477085 STAP2Q9UGK3 403 aa17.84■□□□□ 0.45
COL4A6-206ENST00000477085 NIP7Q9Y221 180 aaKnown RBP eCLIP17.84■□□□□ 0.45
COL4A6-206ENST00000477085 BCORQ6W2J9 1755 aa17.83■□□□□ 0.45
COL4A6-206ENST00000477085 G3BP1Q13283 466 aaKnown RBP eCLIP17.83■□□□□ 0.44
COL4A6-206ENST00000477085 USPL1Q5W0Q7 1092 aa17.83■□□□□ 0.44
COL4A6-206ENST00000477085 CLEC4GQ6UXB4 293 aa17.83■□□□□ 0.44
COL4A6-206ENST00000477085 NARFQ9UHQ1 456 aa17.83■□□□□ 0.44
COL4A6-206ENST00000477085 CHMP3Q9Y3E7 222 aa17.83■□□□□ 0.44
COL4A6-206ENST00000477085 RTCBQ9Y3I0 505 aaKnown RBP17.83■□□□□ 0.44
COL4A6-206ENST00000477085 FAM177BA6PVY3 158 aa17.82■□□□□ 0.44
COL4A6-206ENST00000477085 IRS4O14654 1257 aaPredicted RBP17.82■□□□□ 0.44
COL4A6-206ENST00000477085 MX1P20591 662 aa17.82■□□□□ 0.44
COL4A6-206ENST00000477085 SLC27A3Q5K4L6 730 aa17.82■□□□□ 0.44
COL4A6-206ENST00000477085 ERC1Q8IUD2 1116 aa17.82■□□□□ 0.44
COL4A6-206ENST00000477085 ZNF594Q96JF6 807 aaPredicted RBP17.82■□□□□ 0.44
COL4A6-206ENST00000477085 CCDC85AQ96PX6 553 aaPredicted RBP17.82■□□□□ 0.44
COL4A6-206ENST00000477085 NTSR2O95665 410 aa17.81■□□□□ 0.44
COL4A6-206ENST00000477085 TTLL11Q8NHH1 800 aa17.81■□□□□ 0.44
COL4A6-206ENST00000477085 TXNRD1Q16881 649 aa17.81■□□□□ 0.44
COL4A6-206ENST00000477085 TBC1D9BQ66K14 1250 aa17.81■□□□□ 0.44
COL4A6-206ENST00000477085 ATG9AQ7Z3C6 839 aa17.81■□□□□ 0.44
COL4A6-206ENST00000477085 EAF2Q96CJ1 260 aaPredicted RBP17.81■□□□□ 0.44
COL4A6-206ENST00000477085 UTP14AQ9BVJ6 771 aaKnown RBP17.81■□□□□ 0.44
COL4A6-206ENST00000477085 SDSP20132 328 aa17.8■□□□□ 0.44
COL4A6-206ENST00000477085 PARP10Q53GL7 1025 aa17.8■□□□□ 0.44
COL4A6-206ENST00000477085 ZNF652Q9Y2D9 606 aa17.8■□□□□ 0.44
COL4A6-206ENST00000477085 RGL2O15211 777 aa17.79■□□□□ 0.44
COL4A6-206ENST00000477085 PHF14O94880 888 aa17.79■□□□□ 0.44
COL4A6-206ENST00000477085 HCLS1P14317 486 aaPredicted RBP17.79■□□□□ 0.44
COL4A6-206ENST00000477085 CTSWP56202 376 aa17.79■□□□□ 0.44
COL4A6-206ENST00000477085 AK7Q96M32 723 aa17.79■□□□□ 0.44
COL4A6-206ENST00000477085 PUS3Q9BZE2 481 aaKnown RBP17.79■□□□□ 0.44
COL4A6-206ENST00000477085 SCN7AQ01118 1682 aa17.79■□□□□ 0.44
COL4A6-206ENST00000477085 PLSCR1O15162 318 aa17.79■□□□□ 0.44
COL4A6-206ENST00000477085 PDE8AO60658 829 aa17.79■□□□□ 0.44
COL4A6-206ENST00000477085 APBA3O96018 575 aa17.79■□□□□ 0.44
COL4A6-206ENST00000477085 TFCP2Q12800 502 aa17.79■□□□□ 0.44
COL4A6-206ENST00000477085 LRRC24Q50LG9 513 aa17.79■□□□□ 0.44
COL4A6-206ENST00000477085 TRAPPC3LQ5T215 181 aa17.79■□□□□ 0.44
COL4A6-206ENST00000477085 CLASRPQ8N2M8 674 aaKnown RBP17.79■□□□□ 0.44
COL4A6-206ENST00000477085 PI4K2BQ8TCG2 481 aa17.79■□□□□ 0.44
COL4A6-206ENST00000477085 GREM2Q9H772 168 aa17.79■□□□□ 0.44
COL4A6-206ENST00000477085 SH3TC1Q8TE82 1336 aa17.78■□□□□ 0.44
COL4A6-206ENST00000477085 USP42Q9H9J4 1324 aaKnown RBP17.78■□□□□ 0.44
COL4A6-206ENST00000477085 BICDL1Q6ZP65 573 aa17.77■□□□□ 0.44
COL4A6-206ENST00000477085 AACSQ86V21 672 aa17.77■□□□□ 0.44
COL4A6-206ENST00000477085 TLR7Q9NYK1 1049 aaKnown RBP17.77■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms