RNA–Protein interactions for RNA: ENST00000476961.5

CNTNAP3B-205, Transcript of contactin associated protein like 3B, humanhuman

TSL 1 (best)

Gene CNTNAP3B, Length 2,643 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3B-205ENST00000476961 RANBP17Q9H2T7 1088 aaKnown RBP9.84□□□□□ -0.83
CNTNAP3B-205ENST00000476961 RIPOR2Q9Y4F9 1068 aa9.84□□□□□ -0.83
CNTNAP3B-205ENST00000476961 MAP2P11137 1827 aaKnown RBP9.84□□□□□ -0.83
CNTNAP3B-205ENST00000476961 DIAPH1O60610 1272 aaKnown RBP9.84□□□□□ -0.83
CNTNAP3B-205ENST00000476961 PAX3P23760 479 aa9.84□□□□□ -0.83
CNTNAP3B-205ENST00000476961 MAGEA9P43362 315 aa9.84□□□□□ -0.83
CNTNAP3B-205ENST00000476961 BMS1Q14692 1282 aaKnown RBP9.84□□□□□ -0.83
CNTNAP3B-205ENST00000476961 NOM1Q5C9Z4 860 aaKnown RBP9.84□□□□□ -0.83
CNTNAP3B-205ENST00000476961 KIF1AQ12756 1690 aa9.83□□□□□ -0.84
CNTNAP3B-205ENST00000476961 MARF1Q9Y4F3 1742 aaKnown RBP9.83□□□□□ -0.84
CNTNAP3B-205ENST00000476961 CDK12Q9NYV4 1490 aaPredicted RBP9.83□□□□□ -0.84
CNTNAP3B-205ENST00000476961 TPD52L2O43399 206 aaKnown RBP9.83□□□□□ -0.84
CNTNAP3B-205ENST00000476961 PPFIA2O75334 1257 aa9.83□□□□□ -0.84
CNTNAP3B-205ENST00000476961 MAGEA8P43361 318 aa9.83□□□□□ -0.84
CNTNAP3B-205ENST00000476961 KRBA2Q6ZNG9 492 aa9.83□□□□□ -0.84
CNTNAP3B-205ENST00000476961 SPRYD3Q8NCJ5 442 aa9.83□□□□□ -0.84
CNTNAP3B-205ENST00000476961 RRP15Q9Y3B9 282 aaKnown RBP9.83□□□□□ -0.84
CNTNAP3B-205ENST00000476961 USP54Q70EL1 1684 aa9.83□□□□□ -0.84
CNTNAP3B-205ENST00000476961 U2AF1L5P0DN76 240 aaPredicted RBP9.83□□□□□ -0.84
CNTNAP3B-205ENST00000476961 DDIT3P35638 169 aa9.83□□□□□ -0.84
CNTNAP3B-205ENST00000476961 U2AF1Q01081 240 aaKnown RBP eCLIP9.83□□□□□ -0.84
CNTNAP3B-205ENST00000476961 KLHL40Q2TBA0 621 aa9.83□□□□□ -0.84
CNTNAP3B-205ENST00000476961 MFSD4BQ5TF39 518 aa9.83□□□□□ -0.84
CNTNAP3B-205ENST00000476961 KRT28Q7Z3Y7 464 aa9.83□□□□□ -0.84
CNTNAP3B-205ENST00000476961 PRPF38AQ8NAV1 312 aaKnown RBP9.83□□□□□ -0.84
CNTNAP3B-205ENST00000476961 ST7Q9NRC1 585 aa9.83□□□□□ -0.84
CNTNAP3B-205ENST00000476961 APAF1O14727 1248 aa9.82□□□□□ -0.84
CNTNAP3B-205ENST00000476961 U2SURPO15042 1029 aaKnown RBP9.82□□□□□ -0.84
CNTNAP3B-205ENST00000476961 AP1ARQ63HQ0 302 aa9.82□□□□□ -0.84
CNTNAP3B-205ENST00000476961 CCDC191Q8NCU4 936 aa9.82□□□□□ -0.84
CNTNAP3B-205ENST00000476961 DDX17Q92841 729 aaKnown RBP9.82□□□□□ -0.84
CNTNAP3B-205ENST00000476961 CWC15Q9P013 229 aaKnown RBP9.82□□□□□ -0.84
CNTNAP3B-205ENST00000476961 C21orf2O43822 256 aa9.82□□□□□ -0.84
CNTNAP3B-205ENST00000476961 IL13P35225 146 aa9.82□□□□□ -0.84
CNTNAP3B-205ENST00000476961 AMOTQ4VCS5 1084 aa9.82□□□□□ -0.84
CNTNAP3B-205ENST00000476961 MMS22LQ6ZRQ5 1243 aa9.82□□□□□ -0.84
CNTNAP3B-205ENST00000476961 THOC1Q96FV9 657 aaKnown RBP9.82□□□□□ -0.84
CNTNAP3B-205ENST00000476961 TBC1D32Q96NH3 1257 aa9.82□□□□□ -0.84
CNTNAP3B-205ENST00000476961 CRBNQ96SW2 442 aa9.82□□□□□ -0.84
CNTNAP3B-205ENST00000476961 PCDHGA4Q9Y5G9 962 aa9.82□□□□□ -0.84
CNTNAP3B-205ENST00000476961 MAP3K19Q56UN5 1328 aa9.82□□□□□ -0.84
CNTNAP3B-205ENST00000476961 PEAK1Q9H792 1746 aa9.81□□□□□ -0.84
CNTNAP3B-205ENST00000476961 TRPM3Q9HCF6 1732 aaPredicted RBP9.81□□□□□ -0.84
CNTNAP3B-205ENST00000476961 ERCC3P19447 782 aa9.81□□□□□ -0.84
CNTNAP3B-205ENST00000476961 TRAF1Q13077 416 aa9.81□□□□□ -0.84
CNTNAP3B-205ENST00000476961 GET4Q7L5D6 327 aaPredicted RBP9.81□□□□□ -0.84
CNTNAP3B-205ENST00000476961 CCDC26Q8TAB7 109 aa9.81□□□□□ -0.84
CNTNAP3B-205ENST00000476961 MIEF2Q96C03 454 aa9.81□□□□□ -0.84
CNTNAP3B-205ENST00000476961 ZNF396Q96N95 335 aaPredicted RBP9.81□□□□□ -0.84
CNTNAP3B-205ENST00000476961 IL16Q14005 1332 aa9.81□□□□□ -0.84
CNTNAP3B-205ENST00000476961 CCP110O43303 1012 aa9.81□□□□□ -0.84
CNTNAP3B-205ENST00000476961 RABEP1Q15276 862 aa9.81□□□□□ -0.84
CNTNAP3B-205ENST00000476961 BRINP3Q76B58 766 aa9.81□□□□□ -0.84
CNTNAP3B-205ENST00000476961 NEK11Q8NG66 645 aa9.81□□□□□ -0.84
CNTNAP3B-205ENST00000476961 RUNDC1Q96C34 613 aa9.81□□□□□ -0.84
CNTNAP3B-205ENST00000476961 BRD1O95696 1058 aa9.8□□□□□ -0.84
CNTNAP3B-205ENST00000476961 NAT1P18440 290 aa9.8□□□□□ -0.84
CNTNAP3B-205ENST00000476961 WWC2Q6AWC2 1192 aa9.8□□□□□ -0.84
CNTNAP3B-205ENST00000476961 SLX1AQ9BQ83 275 aa9.8□□□□□ -0.84
CNTNAP3B-205ENST00000476961 TACO1Q9BSH4 297 aaKnown RBP9.8□□□□□ -0.84
CNTNAP3B-205ENST00000476961 SLAIN2Q9P270 581 aa9.8□□□□□ -0.84
CNTNAP3B-205ENST00000476961 MYBL2P10244 700 aa9.8□□□□□ -0.84
CNTNAP3B-205ENST00000476961 TBC1D25Q3MII6 688 aa9.8□□□□□ -0.84
CNTNAP3B-205ENST00000476961 ZNF280DQ6N043 979 aa9.8□□□□□ -0.84
CNTNAP3B-205ENST00000476961 KCNV2Q8TDN2 545 aa9.8□□□□□ -0.84
CNTNAP3B-205ENST00000476961 PLEKHF1Q96S99 279 aa9.8□□□□□ -0.84
CNTNAP3B-205ENST00000476961 RMI1Q9H9A7 625 aa9.8□□□□□ -0.84
CNTNAP3B-205ENST00000476961 ZNF521Q96K83 1311 aa9.8□□□□□ -0.84
CNTNAP3B-205ENST00000476961 IQSEC2Q5JU85 1478 aa9.8□□□□□ -0.84
CNTNAP3B-205ENST00000476961 EIF3JO75822 258 aaKnown RBP9.79□□□□□ -0.84
CNTNAP3B-205ENST00000476961 RBM6P78332 1123 aaKnown RBP9.79□□□□□ -0.84
CNTNAP3B-205ENST00000476961 TBC1D8BQ0IIM8 1120 aa9.79□□□□□ -0.84
CNTNAP3B-205ENST00000476961 PSMD2Q13200 908 aa9.79□□□□□ -0.84
CNTNAP3B-205ENST00000476961 HSP90AB2PQ58FF8 381 aa9.79□□□□□ -0.84
CNTNAP3B-205ENST00000476961 SBNO1A3KN83 1393 aa9.79□□□□□ -0.84
CNTNAP3B-205ENST00000476961 LTBP4Q8N2S1 1624 aa9.79□□□□□ -0.84
CNTNAP3B-205ENST00000476961 SMC2O95347 1197 aa9.79□□□□□ -0.84
CNTNAP3B-205ENST00000476961 EIF4A2Q14240 407 aaKnown RBP9.79□□□□□ -0.84
CNTNAP3B-205ENST00000476961 TCP11L2Q8N4U5 519 aa9.79□□□□□ -0.84
CNTNAP3B-205ENST00000476961 CDCA7LQ96GN5 454 aa9.79□□□□□ -0.84
CNTNAP3B-205ENST00000476961 ARPC5LQ9BPX5 153 aa9.79□□□□□ -0.84
CNTNAP3B-205ENST00000476961 GOPCQ9HD26 462 aa9.79□□□□□ -0.84
CNTNAP3B-205ENST00000476961 CPSF2Q9P2I0 782 aaKnown RBP9.79□□□□□ -0.84
CNTNAP3B-205ENST00000476961 NPHP3Q7Z494 1330 aa9.79□□□□□ -0.84
CNTNAP3B-205ENST00000476961 NFAT5O94916 1531 aa9.78□□□□□ -0.84
CNTNAP3B-205ENST00000476961 PXDNQ92626 1479 aa9.78□□□□□ -0.84
CNTNAP3B-205ENST00000476961 FLT4P35916 1363 aa9.78□□□□□ -0.84
CNTNAP3B-205ENST00000476961 NEBLO76041 1014 aa9.78□□□□□ -0.84
CNTNAP3B-205ENST00000476961 TPM1P09493 284 aa9.78□□□□□ -0.84
CNTNAP3B-205ENST00000476961 SETSIPP0DME0 302 aa9.78□□□□□ -0.84
CNTNAP3B-205ENST00000476961 RWDD2BP57060 319 aa9.78□□□□□ -0.84
CNTNAP3B-205ENST00000476961 PDE3BQ13370 1112 aa9.78□□□□□ -0.84
CNTNAP3B-205ENST00000476961 ZNF397Q8NF99 534 aaPredicted RBP9.78□□□□□ -0.84
CNTNAP3B-205ENST00000476961 MTA3Q9BTC8 594 aa9.78□□□□□ -0.84
CNTNAP3B-205ENST00000476961 SLC24A3Q9HC58 644 aa9.78□□□□□ -0.84
CNTNAP3B-205ENST00000476961 NAP1L1P55209 391 aaKnown RBP9.78□□□□□ -0.84
CNTNAP3B-205ENST00000476961 LMOD2Q6P5Q4 547 aa9.78□□□□□ -0.84
CNTNAP3B-205ENST00000476961 CHCHD3Q9NX63 227 aaKnown RBP9.78□□□□□ -0.84
CNTNAP3B-205ENST00000476961 SUN2Q9UH99 717 aa9.78□□□□□ -0.84
CNTNAP3B-205ENST00000476961 FCHSD2O94868 740 aa9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms