RNA–Protein interactions for RNA: ENST00000476824.1

ITGA4-208, Transcript of integrin subunit alpha 4, humanhuman

TSL 1 (best)

Gene ITGA4, Length 1,004 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA4-208ENST00000476824 SHISA8B8ZZ34 492 aa6.94□□□□□ -1.3
ITGA4-208ENST00000476824 INPP5BP32019 993 aa6.94□□□□□ -1.3
ITGA4-208ENST00000476824 SPEM2Q0P670 501 aa6.94□□□□□ -1.3
ITGA4-208ENST00000476824 HIF1AQ16665 826 aa6.94□□□□□ -1.3
ITGA4-208ENST00000476824 TREML1Q86YW5 311 aa6.94□□□□□ -1.3
ITGA4-208ENST00000476824 COL26A1Q96A83 441 aa6.94□□□□□ -1.3
ITGA4-208ENST00000476824 ADAMTS8Q9UP79 889 aa6.94□□□□□ -1.3
ITGA4-208ENST00000476824 DNMT3AQ9Y6K1 912 aaPredicted RBP6.94□□□□□ -1.3
ITGA4-208ENST00000476824 OPLAHO14841 1288 aa6.93□□□□□ -1.3
ITGA4-208ENST00000476824 OIP5O43482 229 aa6.93□□□□□ -1.3
ITGA4-208ENST00000476824 PTCD1O75127 700 aaKnown RBP6.93□□□□□ -1.3
ITGA4-208ENST00000476824 ARAFP10398 606 aa6.93□□□□□ -1.3
ITGA4-208ENST00000476824 KCNQ4P56696 695 aa6.93□□□□□ -1.3
ITGA4-208ENST00000476824 MAP3K10Q02779 954 aa6.93□□□□□ -1.3
ITGA4-208ENST00000476824 ZNF468Q5VIY5 522 aaPredicted RBP6.93□□□□□ -1.3
ITGA4-208ENST00000476824 SYT9Q86SS6 491 aa6.93□□□□□ -1.3
ITGA4-208ENST00000476824 FCHSD1Q86WN1 690 aa6.93□□□□□ -1.3
ITGA4-208ENST00000476824 GALNT6Q8NCL4 622 aa6.93□□□□□ -1.3
ITGA4-208ENST00000476824 ZBTB39O15060 712 aa6.92□□□□□ -1.3
ITGA4-208ENST00000476824 MTMR3Q13615 1198 aa6.92□□□□□ -1.3
ITGA4-208ENST00000476824 GOLGA6L1Q8N7Z2 621 aa6.92□□□□□ -1.3
ITGA4-208ENST00000476824 EDARADDQ8WWZ3 215 aa6.92□□□□□ -1.3
ITGA4-208ENST00000476824 GDF2Q9UK05 429 aaPredicted RBP6.92□□□□□ -1.3
ITGA4-208ENST00000476824 USTQ9Y2C2 406 aa6.92□□□□□ -1.3
ITGA4-208ENST00000476824 ADH6P28332 368 aa6.91□□□□□ -1.3
ITGA4-208ENST00000476824 ARSDP51689 593 aa6.91□□□□□ -1.3
ITGA4-208ENST00000476824 SLCO4C1Q6ZQN7 724 aa6.91□□□□□ -1.3
ITGA4-208ENST00000476824 RGL4Q8IZJ4 473 aa6.91□□□□□ -1.3
ITGA4-208ENST00000476824 BHMTQ93088 406 aa6.91□□□□□ -1.3
ITGA4-208ENST00000476824 FAM181BA6NEQ2 426 aa6.9□□□□□ -1.3
ITGA4-208ENST00000476824 EPXP11678 715 aa6.9□□□□□ -1.3
ITGA4-208ENST00000476824 BRD2P25440 801 aaKnown RBP6.9□□□□□ -1.3
ITGA4-208ENST00000476824 KRT25Q7Z3Z0 450 aa6.9□□□□□ -1.3
ITGA4-208ENST00000476824 NEDD1Q8NHV4 660 aa6.9□□□□□ -1.3
ITGA4-208ENST00000476824 GTF3C2Q8WUA4 911 aaPredicted RBP6.9□□□□□ -1.3
ITGA4-208ENST00000476824 GSX2Q9BZM3 304 aa6.9□□□□□ -1.3
ITGA4-208ENST00000476824 RTCBQ9Y3I0 505 aaKnown RBP6.9□□□□□ -1.3
ITGA4-208ENST00000476824 CMTR1Q8N1G2 835 aaKnown RBP6.89□□□□□ -1.31
ITGA4-208ENST00000476824 ANO2Q9NQ90 1003 aa6.89□□□□□ -1.31
ITGA4-208ENST00000476824 STIM2Q9P246 746 aa6.89□□□□□ -1.31
ITGA4-208ENST00000476824 NFKB1P19838 968 aa6.88□□□□□ -1.31
ITGA4-208ENST00000476824 SNRPNP63162 240 aaKnown RBP6.88□□□□□ -1.31
ITGA4-208ENST00000476824 TBC1D8BQ0IIM8 1120 aa6.88□□□□□ -1.31
ITGA4-208ENST00000476824 CCINQ13939 588 aa6.88□□□□□ -1.31
ITGA4-208ENST00000476824 ATCAYQ86WG3 371 aa6.88□□□□□ -1.31
ITGA4-208ENST00000476824 IGFLR1Q9H665 355 aa6.88□□□□□ -1.31
ITGA4-208ENST00000476824 AVENQ9NQS1 362 aaPredicted RBP6.88□□□□□ -1.31
ITGA4-208ENST00000476824 ZFATQ9P243 1243 aa6.88□□□□□ -1.31
ITGA4-208ENST00000476824 CNTNAP5Q8WYK1 1306 aa6.87□□□□□ -1.31
ITGA4-208ENST00000476824 SASH3O75995 380 aa6.87□□□□□ -1.31
ITGA4-208ENST00000476824 EPB42P16452 691 aa6.87□□□□□ -1.31
ITGA4-208ENST00000476824 HOXB4P17483 251 aaPredicted RBP6.87□□□□□ -1.31
ITGA4-208ENST00000476824 AMPD1P23109 780 aa6.87□□□□□ -1.31
ITGA4-208ENST00000476824 TARSP26639 723 aaKnown RBP6.87□□□□□ -1.31
ITGA4-208ENST00000476824 ZAP70P43403 619 aa6.87□□□□□ -1.31
ITGA4-208ENST00000476824 MARSP56192 900 aaKnown RBP6.87□□□□□ -1.31
ITGA4-208ENST00000476824 ZNF211Q13398 564 aaPredicted RBP6.87□□□□□ -1.31
ITGA4-208ENST00000476824 TRIP4Q15650 581 aaPredicted RBP6.87□□□□□ -1.31
ITGA4-208ENST00000476824 HELQQ8TDG4 1101 aa6.87□□□□□ -1.31
ITGA4-208ENST00000476824 GPR152Q8TDT2 470 aa6.87□□□□□ -1.31
ITGA4-208ENST00000476824 BTBD6Q96KE9 485 aa6.87□□□□□ -1.31
ITGA4-208ENST00000476824 MDFIQ99750 246 aa6.87□□□□□ -1.31
ITGA4-208ENST00000476824 RRAGCQ9HB90 399 aa6.87□□□□□ -1.31
ITGA4-208ENST00000476824 ENAMQ9NRM1 1142 aa6.87□□□□□ -1.31
ITGA4-208ENST00000476824 LRRC4BQ9NT99 713 aa6.87□□□□□ -1.31
ITGA4-208ENST00000476824 KCNMB2Q9Y691 235 aa6.87□□□□□ -1.31
ITGA4-208ENST00000476824 SIN3BO75182 1162 aa6.86□□□□□ -1.31
ITGA4-208ENST00000476824 ABL1P00519 1130 aa6.86□□□□□ -1.31
ITGA4-208ENST00000476824 MPSTP25325 297 aa6.86□□□□□ -1.31
ITGA4-208ENST00000476824 SERPINB4P48594 390 aa6.86□□□□□ -1.31
ITGA4-208ENST00000476824 PNMA5Q96PV4 448 aa6.86□□□□□ -1.31
ITGA4-208ENST00000476824 GTF3C5Q9Y5Q8 519 aaPredicted RBP6.86□□□□□ -1.31
ITGA4-208ENST00000476824 ELOA3CA0A087WX78 387 aaPredicted RBP6.85□□□□□ -1.31
ITGA4-208ENST00000476824 ELOA3DA6NLF2 546 aaPredicted RBP6.85□□□□□ -1.31
ITGA4-208ENST00000476824 XYLBO75191 536 aa6.85□□□□□ -1.31
ITGA4-208ENST00000476824 ADH7P40394 386 aa6.85□□□□□ -1.31
ITGA4-208ENST00000476824 ELOA3BQ3SY89 546 aa6.85□□□□□ -1.31
ITGA4-208ENST00000476824 CHSY3Q70JA7 882 aa6.85□□□□□ -1.31
ITGA4-208ENST00000476824 ELOA3Q8NG57 546 aa6.85□□□□□ -1.31
ITGA4-208ENST00000476824 UBE2OQ9C0C9 1292 aaKnown RBP6.85□□□□□ -1.31
ITGA4-208ENST00000476824 RARAP10276 462 aa6.84□□□□□ -1.31
ITGA4-208ENST00000476824 NEUROD1Q13562 356 aa6.84□□□□□ -1.31
ITGA4-208ENST00000476824 ABTB2Q8N961 1025 aa6.84□□□□□ -1.31
ITGA4-208ENST00000476824 TNFRSF25Q93038 417 aa6.84□□□□□ -1.31
ITGA4-208ENST00000476824 STARD13Q9Y3M8 1113 aa6.84□□□□□ -1.31
ITGA4-208ENST00000476824 ADARB2-AS1A8MUL3 147 aa6.83□□□□□ -1.32
ITGA4-208ENST00000476824 IRS1P35568 1242 aa6.83□□□□□ -1.32
ITGA4-208ENST00000476824 EIF1AXP47813 144 aaKnown RBP6.83□□□□□ -1.32
ITGA4-208ENST00000476824 GSK3AP49840 483 aa6.83□□□□□ -1.32
ITGA4-208ENST00000476824 MLLT1Q03111 559 aaPredicted RBP6.83□□□□□ -1.32
ITGA4-208ENST00000476824 C8orf86Q6ZUL3 223 aa6.83□□□□□ -1.32
ITGA4-208ENST00000476824 EDEM1Q92611 657 aa6.83□□□□□ -1.32
ITGA4-208ENST00000476824 DNAJB12Q9NXW2 375 aaKnown RBP6.83□□□□□ -1.32
ITGA4-208ENST00000476824 UBAP1LF5GYI3 381 aa6.82□□□□□ -1.32
ITGA4-208ENST00000476824 DGKGP49619 791 aa6.82□□□□□ -1.32
ITGA4-208ENST00000476824 DNM1Q05193 864 aaKnown RBP6.82□□□□□ -1.32
ITGA4-208ENST00000476824 NOM1Q5C9Z4 860 aaKnown RBP6.82□□□□□ -1.32
ITGA4-208ENST00000476824 B4GALNT3Q6L9W6 998 aa6.82□□□□□ -1.32
ITGA4-208ENST00000476824 PIK3R5Q8WYR1 880 aa6.82□□□□□ -1.32
ITGA4-208ENST00000476824 NUDT16Q96DE0 195 aaKnown RBP6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 111.8 ms