RNA–Protein interactions for RNA: ENST00000476724.1

TMEM53-208, Transcript of transmembrane protein 53, humanhuman

TSL 1 (best)

Gene TMEM53, Length 2,075 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-208ENST00000476724 DDB1Q16531 1140 aa19.91■□□□□ 0.78
TMEM53-208ENST00000476724 MCTP1Q6DN14 999 aa19.91■□□□□ 0.78
TMEM53-208ENST00000476724 RIC3Q7Z5B4 369 aa19.91■□□□□ 0.78
TMEM53-208ENST00000476724 CDCA7Q9BWT1 371 aaPredicted RBP19.91■□□□□ 0.78
TMEM53-208ENST00000476724 ATG3Q9NT62 314 aa19.91■□□□□ 0.78
TMEM53-208ENST00000476724 BCL9LQ86UU0 1499 aa19.91■□□□□ 0.78
TMEM53-208ENST00000476724 ARFGEF2Q9Y6D5 1785 aa19.91■□□□□ 0.78
TMEM53-208ENST00000476724 A1BGP04217 495 aa19.91■□□□□ 0.78
TMEM53-208ENST00000476724 RUFY2Q8WXA3 655 aa19.91■□□□□ 0.78
TMEM53-208ENST00000476724 NGLY1Q96IV0 654 aa19.91■□□□□ 0.78
TMEM53-208ENST00000476724 RAD50Q92878 1312 aa19.91■□□□□ 0.78
TMEM53-208ENST00000476724 BCL9O00512 1426 aa19.91■□□□□ 0.78
TMEM53-208ENST00000476724 ARXQ96QS3 562 aa19.9■□□□□ 0.78
TMEM53-208ENST00000476724 ECHDC1Q9NTX5 307 aa19.9■□□□□ 0.78
TMEM53-208ENST00000476724 PKP1Q13835 747 aa19.9■□□□□ 0.78
TMEM53-208ENST00000476724 KIAA1211Q6ZU35 1233 aa19.9■□□□□ 0.78
TMEM53-208ENST00000476724 SYTL4Q96C24 671 aaPredicted RBP19.9■□□□□ 0.78
TMEM53-208ENST00000476724 LMBRD1Q9NUN5 540 aa19.9■□□□□ 0.78
TMEM53-208ENST00000476724 ZDHHC9Q9Y397 364 aa19.9■□□□□ 0.78
TMEM53-208ENST00000476724 IGKV5-2P06315 115 aa19.89■□□□□ 0.77
TMEM53-208ENST00000476724 IFIT2P09913 472 aaKnown RBP19.88■□□□□ 0.77
TMEM53-208ENST00000476724 NEXNQ0ZGT2 675 aa19.88■□□□□ 0.77
TMEM53-208ENST00000476724 BARGINQ6ZT62 677 aa19.88■□□□□ 0.77
TMEM53-208ENST00000476724 MARCH10Q8NA82 808 aaPredicted RBP19.88■□□□□ 0.77
TMEM53-208ENST00000476724 PANK2Q9BZ23 570 aa19.88■□□□□ 0.77
TMEM53-208ENST00000476724 MAP4K4O95819 1239 aaPredicted RBP19.88■□□□□ 0.77
TMEM53-208ENST00000476724 PRIM1P49642 420 aaKnown RBP19.88■□□□□ 0.77
TMEM53-208ENST00000476724 ANKRD13DQ6ZTN6 518 aa19.88■□□□□ 0.77
TMEM53-208ENST00000476724 MYD88Q99836 296 aa19.87■□□□□ 0.77
TMEM53-208ENST00000476724 LSG1Q9H089 658 aaKnown RBP19.87■□□□□ 0.77
TMEM53-208ENST00000476724 IL25Q9H293 177 aa19.87■□□□□ 0.77
TMEM53-208ENST00000476724 AFDNP55196 1824 aaKnown RBP19.87■□□□□ 0.77
TMEM53-208ENST00000476724 ERBB4Q15303 1308 aa19.87■□□□□ 0.77
TMEM53-208ENST00000476724 HSPA1LP34931 641 aa19.87■□□□□ 0.77
TMEM53-208ENST00000476724 G3BP1Q13283 466 aaKnown RBP eCLIP19.87■□□□□ 0.77
TMEM53-208ENST00000476724 GAS2L3Q86XJ1 694 aa19.87■□□□□ 0.77
TMEM53-208ENST00000476724 METTL22Q9BUU2 404 aaPredicted RBP19.87■□□□□ 0.77
TMEM53-208ENST00000476724 TNKS1BP1Q9C0C2 1729 aaKnown RBP19.87■□□□□ 0.77
TMEM53-208ENST00000476724 BRD1O95696 1058 aa19.86■□□□□ 0.77
TMEM53-208ENST00000476724 FAM98CQ17RN3 349 aaKnown RBP19.86■□□□□ 0.77
TMEM53-208ENST00000476724 DNAJC10Q8IXB1 793 aa19.86■□□□□ 0.77
TMEM53-208ENST00000476724 EVI5LQ96CN4 794 aa19.86■□□□□ 0.77
TMEM53-208ENST00000476724 SUCLG2Q96I99 432 aa19.86■□□□□ 0.77
TMEM53-208ENST00000476724 DIAPH3Q9NSV4 1193 aa19.86■□□□□ 0.77
TMEM53-208ENST00000476724 SPATA31A6Q5VVP1 1343 aa19.85■□□□□ 0.77
TMEM53-208ENST00000476724 ZNF445P59923 1031 aa19.85■□□□□ 0.77
TMEM53-208ENST00000476724 TTLL7Q6ZT98 887 aa19.85■□□□□ 0.77
TMEM53-208ENST00000476724 ACSBG1Q96GR2 724 aa19.85■□□□□ 0.77
TMEM53-208ENST00000476724 SLC4A9Q96Q91 983 aa19.85■□□□□ 0.77
TMEM53-208ENST00000476724 NUP188Q5SRE5 1749 aa19.85■□□□□ 0.77
TMEM53-208ENST00000476724 NEURL1BA8MQ27 555 aa19.85■□□□□ 0.77
TMEM53-208ENST00000476724 VPS72Q15906 364 aa19.85■□□□□ 0.77
TMEM53-208ENST00000476724 FNBP4Q8N3X1 1017 aaPredicted RBP19.85■□□□□ 0.77
TMEM53-208ENST00000476724 KAZALD1Q96I82 304 aa19.85■□□□□ 0.77
TMEM53-208ENST00000476724 HIP1O00291 1037 aa19.84■□□□□ 0.77
TMEM53-208ENST00000476724 CWC27Q6UX04 472 aaKnown RBP19.84■□□□□ 0.77
TMEM53-208ENST00000476724 UPF3BQ9BZI7 483 aaKnown RBP19.84■□□□□ 0.77
TMEM53-208ENST00000476724 BICC1Q9H694 974 aaKnown RBP19.84■□□□□ 0.77
TMEM53-208ENST00000476724 PA2G4Q9UQ80 394 aaKnown RBP19.84■□□□□ 0.77
TMEM53-208ENST00000476724 SNX14Q9Y5W7 946 aa19.84■□□□□ 0.77
TMEM53-208ENST00000476724 AACSQ86V21 672 aa19.83■□□□□ 0.76
TMEM53-208ENST00000476724 VSIG10Q8N0Z9 540 aa19.83■□□□□ 0.76
TMEM53-208ENST00000476724 PLBD2Q8NHP8 589 aa19.83■□□□□ 0.76
TMEM53-208ENST00000476724 A0A0G2JS52 829 aa19.82■□□□□ 0.76
TMEM53-208ENST00000476724 PRPF40AO75400 957 aaKnown RBP19.82■□□□□ 0.76
TMEM53-208ENST00000476724 GCKRQ14397 625 aa19.82■□□□□ 0.76
TMEM53-208ENST00000476724 TJP1Q07157 1748 aa19.82■□□□□ 0.76
TMEM53-208ENST00000476724 SASH1O94885 1247 aa19.82■□□□□ 0.76
TMEM53-208ENST00000476724 USP21Q9UK80 565 aa19.82■□□□□ 0.76
TMEM53-208ENST00000476724 ATP5J2-PTCD1G3V325 749 aa19.81■□□□□ 0.76
TMEM53-208ENST00000476724 NCLP19338 710 aaKnown RBP19.8■□□□□ 0.76
TMEM53-208ENST00000476724 JARID2Q92833 1246 aaPredicted RBP19.8■□□□□ 0.76
TMEM53-208ENST00000476724 TTC14Q96N46 770 aa19.8■□□□□ 0.76
TMEM53-208ENST00000476724 MBD3O95983 291 aa19.8■□□□□ 0.76
TMEM53-208ENST00000476724 KCNB2Q92953 911 aa19.8■□□□□ 0.76
TMEM53-208ENST00000476724 ZBTB3Q9H5J0 574 aa19.8■□□□□ 0.76
TMEM53-208ENST00000476724 COL15A1P39059 1388 aa19.79■□□□□ 0.76
TMEM53-208ENST00000476724 CAVIN1Q6NZI2 390 aaKnown RBP19.79■□□□□ 0.76
TMEM53-208ENST00000476724 TEX13AQ9BXU3 409 aaPredicted RBP19.79■□□□□ 0.76
TMEM53-208ENST00000476724 TM6SF1Q9BZW5 370 aa19.79■□□□□ 0.76
TMEM53-208ENST00000476724 LIMCH1Q9UPQ0 1083 aa19.79■□□□□ 0.76
TMEM53-208ENST00000476724 ZNF330Q9Y3S2 320 aaPredicted RBP19.79■□□□□ 0.76
TMEM53-208ENST00000476724 WDR33Q9C0J8 1336 aaKnown RBP19.79■□□□□ 0.76
TMEM53-208ENST00000476724 ZSCAN23Q3MJ62 389 aa19.79■□□□□ 0.76
TMEM53-208ENST00000476724 NOL8Q76FK4 1167 aaKnown RBP19.79■□□□□ 0.76
TMEM53-208ENST00000476724 EAF2Q96CJ1 260 aaPredicted RBP19.79■□□□□ 0.76
TMEM53-208ENST00000476724 RASEFQ8IZ41 740 aa19.78■□□□□ 0.76
TMEM53-208ENST00000476724 ANP32BQ92688 251 aaKnown RBP19.78■□□□□ 0.76
TMEM53-208ENST00000476724 SNRKQ9NRH2 765 aa19.77■□□□□ 0.76
TMEM53-208ENST00000476724 ZSCAN21Q9Y5A6 473 aaPredicted RBP19.77■□□□□ 0.76
TMEM53-208ENST00000476724 KCNQ2O43526 872 aa19.77■□□□□ 0.75
TMEM53-208ENST00000476724 STARD3NLO95772 234 aa19.77■□□□□ 0.75
TMEM53-208ENST00000476724 CYP19A1P11511 503 aaPredicted RBP19.77■□□□□ 0.75
TMEM53-208ENST00000476724 MEX3CQ5U5Q3 659 aaKnown RBP19.77■□□□□ 0.75
TMEM53-208ENST00000476724 GPT2Q8TD30 523 aa19.77■□□□□ 0.75
TMEM53-208ENST00000476724 COPRSQ9NQ92 184 aa19.77■□□□□ 0.75
TMEM53-208ENST00000476724 NASPP49321 788 aaPredicted RBP19.76■□□□□ 0.75
TMEM53-208ENST00000476724 AK2P54819 239 aa19.76■□□□□ 0.75
TMEM53-208ENST00000476724 EPHA10Q5JZY3 1008 aa19.76■□□□□ 0.75
TMEM53-208ENST00000476724 CCDC173Q0VFZ6 552 aa19.75■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms