RNA–Protein interactions for RNA: ENST00000476641.2

CHD6-207, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

TSL 2

Gene CHD6, Length 862 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-207ENST00000476641 QPCTQ16769 361 aa11.31□□□□□ -0.6
CHD6-207ENST00000476641 NBPF14Q5TI25 921 aa11.31□□□□□ -0.6
CHD6-207ENST00000476641 SH3RF1Q7Z6J0 888 aa11.31□□□□□ -0.6
CHD6-207ENST00000476641 TSEN34Q9BSV6 310 aaKnown RBP11.31□□□□□ -0.6
CHD6-207ENST00000476641 LIMD1Q9UGP4 676 aa11.31□□□□□ -0.6
CHD6-207ENST00000476641 TRPC5Q9UL62 973 aaPredicted RBP11.31□□□□□ -0.6
CHD6-207ENST00000476641 TRPM3Q9HCF6 1732 aaPredicted RBP11.3□□□□□ -0.6
CHD6-207ENST00000476641 MAGEB6P1A0A0J9YX57 407 aa11.3□□□□□ -0.6
CHD6-207ENST00000476641 FAM83GA6ND36 823 aa11.3□□□□□ -0.6
CHD6-207ENST00000476641 SRPK2P78362 688 aaKnown RBP11.3□□□□□ -0.6
CHD6-207ENST00000476641 EMILIN1Q9Y6C2 1016 aa11.3□□□□□ -0.6
CHD6-207ENST00000476641 ACEP12821 1306 aa11.3□□□□□ -0.6
CHD6-207ENST00000476641 SLIT2O94813 1529 aa11.3□□□□□ -0.6
CHD6-207ENST00000476641 ARHGEF10O15013 1369 aa11.29□□□□□ -0.6
CHD6-207ENST00000476641 TRPM1Q7Z4N2 1603 aa11.29□□□□□ -0.6
CHD6-207ENST00000476641 ZNF800Q2TB10 664 aaPredicted RBP eCLIP11.29□□□□□ -0.61e-6■■■□□ 16.7
CHD6-207ENST00000476641 TRMT44Q8IYL2 757 aaKnown RBP11.29□□□□□ -0.6
CHD6-207ENST00000476641 KCTD17Q8N5Z5 321 aa11.29□□□□□ -0.6
CHD6-207ENST00000476641 CDK12Q9NYV4 1490 aaPredicted RBP11.29□□□□□ -0.6
CHD6-207ENST00000476641 TTLL8A6PVC2 850 aa11.28□□□□□ -0.6
CHD6-207ENST00000476641 GSK3AP49840 483 aa11.28□□□□□ -0.6
CHD6-207ENST00000476641 KRT76Q01546 638 aa11.28□□□□□ -0.6
CHD6-207ENST00000476641 SH3BP5LQ7L8J4 393 aa11.28□□□□□ -0.6
CHD6-207ENST00000476641 UNC5CLQ8IV45 518 aa11.28□□□□□ -0.6
CHD6-207ENST00000476641 CCDC116Q8IYX3 515 aa11.28□□□□□ -0.6
CHD6-207ENST00000476641 GPR161Q8N6U8 529 aaKnown RBP11.28□□□□□ -0.6
CHD6-207ENST00000476641 POLR3AO14802 1390 aaPredicted RBP11.28□□□□□ -0.6
CHD6-207ENST00000476641 TONSLQ96HA7 1378 aa11.28□□□□□ -0.6
CHD6-207ENST00000476641 PPIP5K1Q6PFW1 1433 aa11.27□□□□□ -0.6
CHD6-207ENST00000476641 SUZ12Q15022 739 aaKnown RBP11.27□□□□□ -0.61
CHD6-207ENST00000476641 MYSM1Q5VVJ2 828 aa11.27□□□□□ -0.61
CHD6-207ENST00000476641 GJD4Q96KN9 370 aaPredicted RBP11.27□□□□□ -0.61
CHD6-207ENST00000476641 CNTNAP3BQ96NU0 1288 aa11.27□□□□□ -0.61
CHD6-207ENST00000476641 CARD14Q9BXL6 1004 aa11.27□□□□□ -0.61
CHD6-207ENST00000476641 CNTNAP3Q9BZ76 1288 aa11.27□□□□□ -0.61
CHD6-207ENST00000476641 EP400Q96L91 3159 aa11.27□□□□□ -0.61
CHD6-207ENST00000476641 ABCA3Q99758 1704 aa11.26□□□□□ -0.61
CHD6-207ENST00000476641 RALGAPBQ86X10 1494 aa11.26□□□□□ -0.61
CHD6-207ENST00000476641 PTSQ03393 145 aa11.26□□□□□ -0.61
CHD6-207ENST00000476641 CHRNA2Q15822 529 aa11.26□□□□□ -0.61
CHD6-207ENST00000476641 HELBQ8NG08 1087 aaPredicted RBP11.26□□□□□ -0.61
CHD6-207ENST00000476641 CABP1Q9NZU7 370 aa11.26□□□□□ -0.61
CHD6-207ENST00000476641 TOPAZ1Q8N9V7 1692 aa11.26□□□□□ -0.61
CHD6-207ENST00000476641 ALS2Q96Q42 1657 aa11.26□□□□□ -0.61
CHD6-207ENST00000476641 QRICH2Q9H0J4 1663 aa11.26□□□□□ -0.61
CHD6-207ENST00000476641 GLI3P10071 1580 aa11.25□□□□□ -0.61
CHD6-207ENST00000476641 FIGNL2A6NMB9 653 aa11.25□□□□□ -0.61
CHD6-207ENST00000476641 LILRB3O75022 631 aa11.25□□□□□ -0.61
CHD6-207ENST00000476641 ZC3H6P61129 1189 aaKnown RBP11.25□□□□□ -0.61
CHD6-207ENST00000476641 AK7Q96M32 723 aa11.25□□□□□ -0.61
CHD6-207ENST00000476641 CARD11Q9BXL7 1154 aa11.25□□□□□ -0.61
CHD6-207ENST00000476641 MARF1Q9Y4F3 1742 aaKnown RBP11.24□□□□□ -0.61
CHD6-207ENST00000476641 TUSC1Q2TAM9 212 aa11.24□□□□□ -0.61
CHD6-207ENST00000476641 PCGF6Q9BYE7 350 aa11.24□□□□□ -0.61
CHD6-207ENST00000476641 BTG4Q9NY30 223 aa11.24□□□□□ -0.61
CHD6-207ENST00000476641 CCDC9Q9Y3X0 531 aaKnown RBP11.24□□□□□ -0.61
CHD6-207ENST00000476641 KIAA0232Q92628 1395 aa11.24□□□□□ -0.61
CHD6-207ENST00000476641 VPS72Q15906 364 aa11.23□□□□□ -0.61
CHD6-207ENST00000476641 TMEM151AQ8N4L1 468 aa11.23□□□□□ -0.61
CHD6-207ENST00000476641 EVC2Q86UK5 1308 aa11.23□□□□□ -0.61
CHD6-207ENST00000476641 CBLBQ13191 982 aa11.22□□□□□ -0.61
CHD6-207ENST00000476641 ERFEQ4G0M1 354 aa11.22□□□□□ -0.61
CHD6-207ENST00000476641 PLCH1Q4KWH8 1693 aa11.22□□□□□ -0.61
CHD6-207ENST00000476641 RTL5Q5HYW3 569 aaPredicted RBP11.22□□□□□ -0.61
CHD6-207ENST00000476641 PPP1R26Q5T8A7 1209 aaPredicted RBP11.22□□□□□ -0.61
CHD6-207ENST00000476641 ABTB2Q8N961 1025 aa11.22□□□□□ -0.61
CHD6-207ENST00000476641 COL25A1Q9BXS0 654 aaPredicted RBP11.22□□□□□ -0.61
CHD6-207ENST00000476641 PRDM11Q9NQV5 511 aa11.22□□□□□ -0.61
CHD6-207ENST00000476641 ADAMTS8Q9UP79 889 aa11.22□□□□□ -0.61
CHD6-207ENST00000476641 ITSN1Q15811 1721 aa11.21□□□□□ -0.61
CHD6-207ENST00000476641 CRYBG1Q9Y4K1 1723 aa11.21□□□□□ -0.61
CHD6-207ENST00000476641 USP6P35125 1406 aa11.21□□□□□ -0.61
CHD6-207ENST00000476641 GDF11O95390 407 aa11.21□□□□□ -0.61
CHD6-207ENST00000476641 RASSF7Q02833 373 aa11.21□□□□□ -0.61
CHD6-207ENST00000476641 SEPT12Q8IYM1 358 aa11.21□□□□□ -0.61
CHD6-207ENST00000476641 PGPEP1Q9NXJ5 209 aa11.21□□□□□ -0.61
CHD6-207ENST00000476641 SRCAPQ6ZRS2 3230 aa11.2□□□□□ -0.62
CHD6-207ENST00000476641 USP19O94966 1318 aa11.2□□□□□ -0.62
CHD6-207ENST00000476641 CCDC155Q8N6L0 562 aa11.2□□□□□ -0.62
CHD6-207ENST00000476641 GPKOWQ92917 476 aaPredicted RBP eCLIP11.2□□□□□ -0.62
CHD6-207ENST00000476641 SSH2Q76I76 1423 aa11.19□□□□□ -0.62
CHD6-207ENST00000476641 ATAD2Q6PL18 1390 aa11.19□□□□□ -0.62
CHD6-207ENST00000476641 TNKS1BP1Q9C0C2 1729 aaKnown RBP11.19□□□□□ -0.62
CHD6-207ENST00000476641 ZBTB7CA1YPR0 619 aa11.19□□□□□ -0.62
CHD6-207ENST00000476641 RNF225M0QZC1 329 aaPredicted RBP11.19□□□□□ -0.62
CHD6-207ENST00000476641 SPINT1O43278 529 aa11.19□□□□□ -0.62
CHD6-207ENST00000476641 Q6ZVU0 165 aa11.19□□□□□ -0.62
CHD6-207ENST00000476641 NANOS1Q8WY41 292 aaKnown RBP11.19□□□□□ -0.62
CHD6-207ENST00000476641 STRN4Q9NRL3 753 aa11.19□□□□□ -0.62
CHD6-207ENST00000476641 NRAPQ86VF7 1730 aa11.18□□□□□ -0.62
CHD6-207ENST00000476641 PHRF1Q9P1Y6 1649 aaKnown RBP11.18□□□□□ -0.62
CHD6-207ENST00000476641 FAM182BQ5T319 152 aa11.18□□□□□ -0.62
CHD6-207ENST00000476641 NRKQ7Z2Y5 1582 aa11.18□□□□□ -0.62
CHD6-207ENST00000476641 SPATA31A5Q5VU36 1347 aa11.17□□□□□ -0.62
CHD6-207ENST00000476641 TTC21BQ7Z4L5 1316 aa11.17□□□□□ -0.62
CHD6-207ENST00000476641 SPATA31A7Q8IWB4 1347 aa11.17□□□□□ -0.62
CHD6-207ENST00000476641 ST20-MTHFSA0A0A6YYL1 179 aa11.17□□□□□ -0.62
CHD6-207ENST00000476641 GCP02774 474 aa11.17□□□□□ -0.62
CHD6-207ENST00000476641 CLK2P49760 499 aaKnown RBP11.17□□□□□ -0.62
CHD6-207ENST00000476641 PDE4DQ08499 809 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms