RNA–Protein interactions for RNA: ENST00000476597.1

SEC13-214, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 614 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-214ENST00000476597 TCIRG1Q13488 830 aa14.05□□□□□ -0.16
SEC13-214ENST00000476597 IFT57Q9NWB7 429 aa14.05□□□□□ -0.16
SEC13-214ENST00000476597 CHPF2Q9P2E5 772 aa14.05□□□□□ -0.16
SEC13-214ENST00000476597 DBF4Q9UBU7 674 aaPredicted RBP14.05□□□□□ -0.16
SEC13-214ENST00000476597 COL11A2P13942 1736 aaPredicted RBP14.04□□□□□ -0.16
SEC13-214ENST00000476597 SBF1O95248 1867 aa14.04□□□□□ -0.16
SEC13-214ENST00000476597 APLP1P51693 650 aa14.04□□□□□ -0.16
SEC13-214ENST00000476597 CALD1Q05682 793 aaKnown RBP14.04□□□□□ -0.16
SEC13-214ENST00000476597 NLRP10Q86W26 655 aa14.04□□□□□ -0.16
SEC13-214ENST00000476597 RBM17Q96I25 401 aaKnown RBP14.04□□□□□ -0.16
SEC13-214ENST00000476597 NLRP3Q96P20 1036 aa14.04□□□□□ -0.16
SEC13-214ENST00000476597 CRAMP1Q96RY5 1269 aa14.04□□□□□ -0.16
SEC13-214ENST00000476597 RIC1Q4ADV7 1423 aa14.04□□□□□ -0.16
SEC13-214ENST00000476597 CC2D2BQ6DHV5 1058 aa14.03□□□□□ -0.16
SEC13-214ENST00000476597 ANKRD13DQ6ZTN6 518 aa14.03□□□□□ -0.16
SEC13-214ENST00000476597 C3orf67Q6ZVT6 689 aa14.03□□□□□ -0.16
SEC13-214ENST00000476597 PLBD2Q8NHP8 589 aa14.03□□□□□ -0.16
SEC13-214ENST00000476597 RPGRQ92834 1020 aaKnown RBP14.03□□□□□ -0.16
SEC13-214ENST00000476597 RNF123Q5XPI4 1314 aa14.03□□□□□ -0.16
SEC13-214ENST00000476597 SLX4Q8IY92 1834 aa14.03□□□□□ -0.16
SEC13-214ENST00000476597 DDNO94850 711 aaPredicted RBP14.02□□□□□ -0.17
SEC13-214ENST00000476597 SYNE4Q8N205 404 aa14.02□□□□□ -0.17
SEC13-214ENST00000476597 PSMD1Q99460 953 aa14.02□□□□□ -0.17
SEC13-214ENST00000476597 ZNF277Q9NRM2 450 aaPredicted RBP14.02□□□□□ -0.17
SEC13-214ENST00000476597 HYPKQ9NX55 129 aa14.02□□□□□ -0.17
SEC13-214ENST00000476597 GRIPAP1Q4V328 841 aa14.01□□□□□ -0.17
SEC13-214ENST00000476597 DNAJC5GQ8N7S2 189 aa14.01□□□□□ -0.17
SEC13-214ENST00000476597 SMC1BQ8NDV3 1235 aa14.01□□□□□ -0.17
SEC13-214ENST00000476597 ISCA1Q9BUE6 129 aa14.01□□□□□ -0.17
SEC13-214ENST00000476597 TRMT112Q9UI30 125 aaKnown RBP14.01□□□□□ -0.17
SEC13-214ENST00000476597 ELL2O00472 640 aaPredicted RBP14□□□□□ -0.17
SEC13-214ENST00000476597 HCLS1P14317 486 aaPredicted RBP14□□□□□ -0.17
SEC13-214ENST00000476597 CCDC27Q2M243 656 aa14□□□□□ -0.17
SEC13-214ENST00000476597 C8orf58Q8NAV2 365 aa14□□□□□ -0.17
SEC13-214ENST00000476597 FER1L6Q2WGJ9 1857 aa13.99□□□□□ -0.17
SEC13-214ENST00000476597 SNED1Q8TER0 1413 aa13.99□□□□□ -0.17
SEC13-214ENST00000476597 NUP98P52948 1817 aa13.99□□□□□ -0.17
SEC13-214ENST00000476597 ANP32CO43423 234 aa13.99□□□□□ -0.17
SEC13-214ENST00000476597 IARSP41252 1262 aaKnown RBP13.99□□□□□ -0.17
SEC13-214ENST00000476597 TRIM28Q13263 835 aaKnown RBP13.99□□□□□ -0.17
SEC13-214ENST00000476597 NCBP3Q53F19 620 aaKnown RBP13.99□□□□□ -0.17
SEC13-214ENST00000476597 SH3TC1Q8TE82 1336 aa13.98□□□□□ -0.17
SEC13-214ENST00000476597 FZD9O00144 591 aa13.98□□□□□ -0.17
SEC13-214ENST00000476597 PPEF1O14829 653 aaPredicted RBP13.98□□□□□ -0.17
SEC13-214ENST00000476597 BBOX1O75936 387 aa13.98□□□□□ -0.17
SEC13-214ENST00000476597 L3MBTL3Q96JM7 780 aaPredicted RBP13.98□□□□□ -0.17
SEC13-214ENST00000476597 CHMP4AQ9BY43 222 aa13.98□□□□□ -0.17
SEC13-214ENST00000476597 PHAXQ9H814 394 aaKnown RBP13.98□□□□□ -0.17
SEC13-214ENST00000476597 MRS2Q9HD23 443 aa13.98□□□□□ -0.17
SEC13-214ENST00000476597 ATP6V0A2Q9Y487 856 aa13.98□□□□□ -0.17
SEC13-214ENST00000476597 ATP5J2-PTCD1G3V325 749 aa13.97□□□□□ -0.17
SEC13-214ENST00000476597 TCERG1O14776 1098 aaKnown RBP13.97□□□□□ -0.17
SEC13-214ENST00000476597 RIC3Q7Z5B4 369 aa13.97□□□□□ -0.17
SEC13-214ENST00000476597 SLC51AQ86UW1 340 aa13.97□□□□□ -0.17
SEC13-214ENST00000476597 WWC1Q8IX03 1113 aa13.97□□□□□ -0.17
SEC13-214ENST00000476597 TNRC6CQ9HCJ0 1690 aaKnown RBP13.97□□□□□ -0.17
SEC13-214ENST00000476597 ABCC4O15439 1325 aa13.96□□□□□ -0.17
SEC13-214ENST00000476597 SP8Q8IXZ3 490 aa13.96□□□□□ -0.17
SEC13-214ENST00000476597 TSPYL6Q8N831 410 aa13.96□□□□□ -0.17
SEC13-214ENST00000476597 JDP2Q8WYK2 163 aa13.96□□□□□ -0.17
SEC13-214ENST00000476597 ZNF428Q96B54 188 aa13.96□□□□□ -0.17
SEC13-214ENST00000476597 FAM89AQ96GI7 184 aa13.96□□□□□ -0.17
SEC13-214ENST00000476597 TMX4Q9H1E5 349 aaPredicted RBP13.96□□□□□ -0.17
SEC13-214ENST00000476597 ARFGEF2Q9Y6D5 1785 aa13.96□□□□□ -0.18
SEC13-214ENST00000476597 ZNF541Q9H0D2 1346 aa13.95□□□□□ -0.18
SEC13-214ENST00000476597 IQCA1LA6NCM1 817 aa13.95□□□□□ -0.18
SEC13-214ENST00000476597 HTRA3P83110 453 aa13.95□□□□□ -0.18
SEC13-214ENST00000476597 GOLGA2Q08379 1002 aa13.95□□□□□ -0.18
SEC13-214ENST00000476597 SF3B3Q15393 1217 aaKnown RBP13.95□□□□□ -0.18
SEC13-214ENST00000476597 CCDC30Q5VVM6 783 aa13.95□□□□□ -0.18
SEC13-214ENST00000476597 DDX46Q7L014 1031 aaKnown RBP13.95□□□□□ -0.18
SEC13-214ENST00000476597 TSR2Q969E8 191 aaKnown RBP13.95□□□□□ -0.18
SEC13-214ENST00000476597 VPS33BQ9H267 617 aa13.95□□□□□ -0.18
SEC13-214ENST00000476597 GRAPQ13588 217 aa13.94□□□□□ -0.18
SEC13-214ENST00000476597 CHADLQ6NUI6 762 aa13.94□□□□□ -0.18
SEC13-214ENST00000476597 LARGE2Q8N3Y3 721 aa13.94□□□□□ -0.18
SEC13-214ENST00000476597 GRAPLQ8TC17 118 aaPredicted RBP13.94□□□□□ -0.18
SEC13-214ENST00000476597 WDR90Q96KV7 1748 aa13.94□□□□□ -0.18
SEC13-214ENST00000476597 RTFDC1Q9BY42 306 aaPredicted RBP13.94□□□□□ -0.18
SEC13-214ENST00000476597 TAF1DQ9H5J8 278 aaPredicted RBP13.94□□□□□ -0.18
SEC13-214ENST00000476597 IL16Q14005 1332 aa13.93□□□□□ -0.18
SEC13-214ENST00000476597 POTEIP0CG38 1075 aa13.93□□□□□ -0.18
SEC13-214ENST00000476597 POTEJP0CG39 1038 aa13.93□□□□□ -0.18
SEC13-214ENST00000476597 GPC2Q8N158 579 aa13.93□□□□□ -0.18
SEC13-214ENST00000476597 HACL1Q9UJ83 578 aa13.93□□□□□ -0.18
SEC13-214ENST00000476597 CCDC88AQ3V6T2 1871 aa13.93□□□□□ -0.18
SEC13-214ENST00000476597 TIAM2Q8IVF5 1701 aa13.93□□□□□ -0.18
SEC13-214ENST00000476597 IRS4O14654 1257 aaPredicted RBP13.92□□□□□ -0.18
SEC13-214ENST00000476597 EIF6P56537 245 aaKnown RBP13.92□□□□□ -0.18
SEC13-214ENST00000476597 TMC4Q7Z404 712 aa13.92□□□□□ -0.18
SEC13-214ENST00000476597 MPNDQ8N594 471 aa13.92□□□□□ -0.18
SEC13-214ENST00000476597 ZBTB38Q8NAP3 1195 aaPredicted RBP13.92□□□□□ -0.18
SEC13-214ENST00000476597 SUPT20HQ8NEM7 779 aa13.92□□□□□ -0.18
SEC13-214ENST00000476597 KLRG1Q96E93 195 aa13.92□□□□□ -0.18
SEC13-214ENST00000476597 MYD88Q99836 296 aa13.92□□□□□ -0.18
SEC13-214ENST00000476597 DICER1Q9UPY3 1922 aaKnown RBP13.92□□□□□ -0.18
SEC13-214ENST00000476597 PCNTO95613 3336 aa13.91□□□□□ -0.18
SEC13-214ENST00000476597 PPIP5K2O43314 1243 aa13.91□□□□□ -0.18
SEC13-214ENST00000476597 DDX58O95786 925 aaKnown RBP13.91□□□□□ -0.18
SEC13-214ENST00000476597 AOC3Q16853 763 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms