RNA–Protein interactions for RNA: ENST00000476466.1

SLC6A8-209, Transcript of solute carrier family 6 member 8, humanhuman

TSL 3

Gene SLC6A8, Length 470 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A8-209ENST00000476466 NLRP10Q86W26 655 aa18.34■□□□□ 0.53
SLC6A8-209ENST00000476466 NYXQ9GZU5 481 aa18.34■□□□□ 0.53
SLC6A8-209ENST00000476466 LAMB2P55268 1798 aa18.34■□□□□ 0.53
SLC6A8-209ENST00000476466 DBF4Q9UBU7 674 aaPredicted RBP18.33■□□□□ 0.52
SLC6A8-209ENST00000476466 COL4A1P02462 1669 aa18.32■□□□□ 0.52
SLC6A8-209ENST00000476466 DICER1Q9UPY3 1922 aaKnown RBP18.32■□□□□ 0.52
SLC6A8-209ENST00000476466 GTF2E1P29083 439 aaPredicted RBP18.32■□□□□ 0.52
SLC6A8-209ENST00000476466 CALD1Q05682 793 aaKnown RBP18.32■□□□□ 0.52
SLC6A8-209ENST00000476466 TCIRG1Q13488 830 aa18.32■□□□□ 0.52
SLC6A8-209ENST00000476466 PARP10Q53GL7 1025 aa18.32■□□□□ 0.52
SLC6A8-209ENST00000476466 PHAXQ9H814 394 aaKnown RBP18.32■□□□□ 0.52
SLC6A8-209ENST00000476466 SALL2Q9Y467 1007 aaPredicted RBP18.32■□□□□ 0.52
SLC6A8-209ENST00000476466 LTBP3Q9NS15 1303 aa18.31■□□□□ 0.52
SLC6A8-209ENST00000476466 DDX60Q8IY21 1712 aaKnown RBP18.31■□□□□ 0.52
SLC6A8-209ENST00000476466 PLBD2Q8NHP8 589 aa18.3■□□□□ 0.52
SLC6A8-209ENST00000476466 UTP14AQ9BVJ6 771 aaKnown RBP18.3■□□□□ 0.52
SLC6A8-209ENST00000476466 TAOK3Q9H2K8 898 aa18.3■□□□□ 0.52
SLC6A8-209ENST00000476466 SPINK5Q9NQ38 1064 aaPredicted RBP18.3■□□□□ 0.52
SLC6A8-209ENST00000476466 COL4A5P29400 1685 aa18.3■□□□□ 0.52
SLC6A8-209ENST00000476466 ATP5J2-PTCD1G3V325 749 aa18.29■□□□□ 0.52
SLC6A8-209ENST00000476466 HCLS1P14317 486 aaPredicted RBP18.29■□□□□ 0.52
SLC6A8-209ENST00000476466 ANKRD13DQ6ZTN6 518 aa18.29■□□□□ 0.52
SLC6A8-209ENST00000476466 PPP1R42Q7Z4L9 355 aa18.29■□□□□ 0.52
SLC6A8-209ENST00000476466 ISCA1Q9BUE6 129 aa18.29■□□□□ 0.52
SLC6A8-209ENST00000476466 FANCIQ9NVI1 1328 aa18.28■□□□□ 0.52
SLC6A8-209ENST00000476466 TCERG1O14776 1098 aaKnown RBP18.28■□□□□ 0.52
SLC6A8-209ENST00000476466 HOXA10P31260 410 aaPredicted RBP18.28■□□□□ 0.52
SLC6A8-209ENST00000476466 CCDC93Q567U6 631 aa18.28■□□□□ 0.52
SLC6A8-209ENST00000476466 HSP90AB3PQ58FF7 597 aa18.28■□□□□ 0.52
SLC6A8-209ENST00000476466 FAM9BQ8IZU0 186 aa18.28■□□□□ 0.52
SLC6A8-209ENST00000476466 HYPKQ9NX55 129 aa18.28■□□□□ 0.52
SLC6A8-209ENST00000476466 IL16Q14005 1332 aa18.27■□□□□ 0.52
SLC6A8-209ENST00000476466 ZC3H4Q9UPT8 1303 aaKnown RBP18.27■□□□□ 0.52
SLC6A8-209ENST00000476466 SLC10A5Q5PT55 438 aa18.27■□□□□ 0.52
SLC6A8-209ENST00000476466 TAF1P21675 1872 aa18.26■□□□□ 0.51
SLC6A8-209ENST00000476466 NCBP3Q53F19 620 aaKnown RBP18.26■□□□□ 0.51
SLC6A8-209ENST00000476466 RPGRQ92834 1020 aaKnown RBP18.26■□□□□ 0.51
SLC6A8-209ENST00000476466 RRAGCQ9HB90 399 aa18.26■□□□□ 0.51
SLC6A8-209ENST00000476466 ZNF277Q9NRM2 450 aaPredicted RBP18.26■□□□□ 0.51
SLC6A8-209ENST00000476466 PCNTO95613 3336 aa18.26■□□□□ 0.51
SLC6A8-209ENST00000476466 ABCC4O15439 1325 aa18.25■□□□□ 0.51
SLC6A8-209ENST00000476466 GLTPD2A6NH11 291 aa18.25■□□□□ 0.51
SLC6A8-209ENST00000476466 FKBP4Q02790 459 aaKnown RBP eCLIP18.25■□□□□ 0.51
SLC6A8-209ENST00000476466 TRMT112Q9UI30 125 aaKnown RBP18.25■□□□□ 0.51
SLC6A8-209ENST00000476466 RNF123Q5XPI4 1314 aa18.24■□□□□ 0.51
SLC6A8-209ENST00000476466 KDM2BQ8NHM5 1336 aa18.24■□□□□ 0.51
SLC6A8-209ENST00000476466 SH3TC1Q8TE82 1336 aa18.24■□□□□ 0.51
SLC6A8-209ENST00000476466 WDR90Q96KV7 1748 aa18.24■□□□□ 0.51
SLC6A8-209ENST00000476466 POTECB2RU33 542 aa18.24■□□□□ 0.51
SLC6A8-209ENST00000476466 ALDH1B1P30837 517 aa18.24■□□□□ 0.51
SLC6A8-209ENST00000476466 SOGA3Q5TF21 947 aa18.24■□□□□ 0.51
SLC6A8-209ENST00000476466 G2E3Q7L622 706 aa18.24■□□□□ 0.51
SLC6A8-209ENST00000476466 FAM89AQ96GI7 184 aa18.24■□□□□ 0.51
SLC6A8-209ENST00000476466 CRAMP1Q96RY5 1269 aa18.24■□□□□ 0.51
SLC6A8-209ENST00000476466 PPEF1O14829 653 aaPredicted RBP18.23■□□□□ 0.51
SLC6A8-209ENST00000476466 TWISTNBQ3B726 338 aaPredicted RBP18.23■□□□□ 0.51
SLC6A8-209ENST00000476466 RTL5Q5HYW3 569 aaPredicted RBP18.23■□□□□ 0.51
SLC6A8-209ENST00000476466 NLRP3Q96P20 1036 aa18.23■□□□□ 0.51
SLC6A8-209ENST00000476466 ZNF541Q9H0D2 1346 aa18.23■□□□□ 0.51
SLC6A8-209ENST00000476466 GOLGA2Q08379 1002 aa18.22■□□□□ 0.51
SLC6A8-209ENST00000476466 CCDC30Q5VVM6 783 aa18.22■□□□□ 0.51
SLC6A8-209ENST00000476466 RBM17Q96I25 401 aaKnown RBP18.22■□□□□ 0.51
SLC6A8-209ENST00000476466 MYD88Q99836 296 aa18.22■□□□□ 0.51
SLC6A8-209ENST00000476466 ZNF521Q96K83 1311 aa18.22■□□□□ 0.51
SLC6A8-209ENST00000476466 DUOX1Q9NRD9 1551 aa18.21■□□□□ 0.51
SLC6A8-209ENST00000476466 TOMM70O94826 608 aa18.21■□□□□ 0.51
SLC6A8-209ENST00000476466 TRIM28Q13263 835 aaKnown RBP18.21■□□□□ 0.51
SLC6A8-209ENST00000476466 RIC3Q7Z5B4 369 aa18.21■□□□□ 0.51
SLC6A8-209ENST00000476466 WDR63Q8IWG1 891 aa18.21■□□□□ 0.51
SLC6A8-209ENST00000476466 LRRC37AA6NMS7 1700 aa18.2■□□□□ 0.5
SLC6A8-209ENST00000476466 DDNO94850 711 aaPredicted RBP18.2■□□□□ 0.5
SLC6A8-209ENST00000476466 RTKN2Q8IZC4 609 aa18.2■□□□□ 0.5
SLC6A8-209ENST00000476466 JARID2Q92833 1246 aaPredicted RBP18.2■□□□□ 0.5
SLC6A8-209ENST00000476466 IGKV5-2P06315 115 aa18.19■□□□□ 0.5
SLC6A8-209ENST00000476466 HSPA6P17066 643 aa18.19■□□□□ 0.5
SLC6A8-209ENST00000476466 EXOSC9Q06265 439 aaKnown RBP18.19■□□□□ 0.5
SLC6A8-209ENST00000476466 PSMD1Q99460 953 aa18.19■□□□□ 0.5
SLC6A8-209ENST00000476466 MAP3K2Q9Y2U5 619 aa18.19■□□□□ 0.5
SLC6A8-209ENST00000476466 IARSP41252 1262 aaKnown RBP18.18■□□□□ 0.5
SLC6A8-209ENST00000476466 METTL22Q9BUU2 404 aaPredicted RBP18.18■□□□□ 0.5
SLC6A8-209ENST00000476466 ATP6V0A2Q9Y487 856 aa18.18■□□□□ 0.5
SLC6A8-209ENST00000476466 PI4KAP2A4QPH2 592 aa18.17■□□□□ 0.5
SLC6A8-209ENST00000476466 VAMP4O75379 141 aa18.17■□□□□ 0.5
SLC6A8-209ENST00000476466 PI4KAP1Q8N8J0 262 aa18.17■□□□□ 0.5
SLC6A8-209ENST00000476466 RBM46Q8TBY0 533 aaKnown RBP18.17■□□□□ 0.5
SLC6A8-209ENST00000476466 CELF1Q92879 486 aaKnown RBP18.17■□□□□ 0.5
SLC6A8-209ENST00000476466 LTBP1Q14766 1721 aa18.16■□□□□ 0.5
SLC6A8-209ENST00000476466 IRS4O14654 1257 aaPredicted RBP18.16■□□□□ 0.5
SLC6A8-209ENST00000476466 POTEIP0CG38 1075 aa18.16■□□□□ 0.5
SLC6A8-209ENST00000476466 POTEJP0CG39 1038 aa18.16■□□□□ 0.5
SLC6A8-209ENST00000476466 GRAPQ13588 217 aa18.16■□□□□ 0.5
SLC6A8-209ENST00000476466 ZBTB38Q8NAP3 1195 aaPredicted RBP18.16■□□□□ 0.5
SLC6A8-209ENST00000476466 GRAPLQ8TC17 118 aaPredicted RBP18.16■□□□□ 0.5
SLC6A8-209ENST00000476466 FZD9O00144 591 aa18.15■□□□□ 0.5
SLC6A8-209ENST00000476466 SLC4A2P04920 1241 aa18.15■□□□□ 0.5
SLC6A8-209ENST00000476466 VEGFAP15692 232 aaPredicted RBP18.15■□□□□ 0.5
SLC6A8-209ENST00000476466 SF3B3Q15393 1217 aaKnown RBP18.15■□□□□ 0.5
SLC6A8-209ENST00000476466 CWF19L2Q2TBE0 894 aaKnown RBP18.15■□□□□ 0.5
SLC6A8-209ENST00000476466 CC2D2BQ6DHV5 1058 aa18.15■□□□□ 0.5
SLC6A8-209ENST00000476466 KSR2Q6VAB6 950 aa18.15■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms