RNA–Protein interactions for RNA: ENST00000476367.5

CCNL1-217, Transcript of cyclin L1, humanhuman

TSL 1 (best)

Gene CCNL1, Length 1,603 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1-217ENST00000476367 IBTKQ9P2D0 1353 aaPredicted RBP18.34■□□□□ 0.53
CCNL1-217ENST00000476367 TPTE2Q6XPS3 522 aa18.34■□□□□ 0.53
CCNL1-217ENST00000476367 NLRP10Q86W26 655 aa18.34■□□□□ 0.53
CCNL1-217ENST00000476367 NYXQ9GZU5 481 aa18.34■□□□□ 0.53
CCNL1-217ENST00000476367 A0A0G2JLW4 131 aa18.33■□□□□ 0.52
CCNL1-217ENST00000476367 NTSR2O95665 410 aa18.33■□□□□ 0.52
CCNL1-217ENST00000476367 PPP1R42Q7Z4L9 355 aa18.33■□□□□ 0.52
CCNL1-217ENST00000476367 PELP1Q8IZL8 1130 aaKnown RBP18.33■□□□□ 0.52
CCNL1-217ENST00000476367 METTL22Q9BUU2 404 aaPredicted RBP18.33■□□□□ 0.52
CCNL1-217ENST00000476367 PTPRCP08575 1304 aa18.32■□□□□ 0.52
CCNL1-217ENST00000476367 LAMB2P55268 1798 aa18.32■□□□□ 0.52
CCNL1-217ENST00000476367 IGKV5-2P06315 115 aa18.32■□□□□ 0.52
CCNL1-217ENST00000476367 TRIM27P14373 513 aa18.32■□□□□ 0.52
CCNL1-217ENST00000476367 DPEP1P16444 411 aa18.32■□□□□ 0.52
CCNL1-217ENST00000476367 CHRNA5P30532 468 aa18.32■□□□□ 0.52
CCNL1-217ENST00000476367 ERFEQ4G0M1 354 aa18.32■□□□□ 0.52
CCNL1-217ENST00000476367 ISCA1Q9BUE6 129 aa18.32■□□□□ 0.52
CCNL1-217ENST00000476367 DDX60Q8IY21 1712 aaKnown RBP18.31■□□□□ 0.52
CCNL1-217ENST00000476367 TGFB2P61812 414 aa18.31■□□□□ 0.52
CCNL1-217ENST00000476367 UTP14AQ9BVJ6 771 aaKnown RBP18.31■□□□□ 0.52
CCNL1-217ENST00000476367 PLIN1O60240 522 aa18.31■□□□□ 0.52
CCNL1-217ENST00000476367 RLBP1P12271 317 aa18.31■□□□□ 0.52
CCNL1-217ENST00000476367 NEXNQ0ZGT2 675 aa18.31■□□□□ 0.52
CCNL1-217ENST00000476367 DNAAF4Q8WXU2 420 aa18.31■□□□□ 0.52
CCNL1-217ENST00000476367 ARHGAP45Q92619 1136 aa18.31■□□□□ 0.52
CCNL1-217ENST00000476367 BRIP1Q9BX63 1249 aa18.31■□□□□ 0.52
CCNL1-217ENST00000476367 TRMT112Q9UI30 125 aaKnown RBP18.31■□□□□ 0.52
CCNL1-217ENST00000476367 KIF16BQ96L93 1317 aa18.3■□□□□ 0.52
CCNL1-217ENST00000476367 RTL5Q5HYW3 569 aaPredicted RBP18.3■□□□□ 0.52
CCNL1-217ENST00000476367 RNF123Q5XPI4 1314 aa18.29■□□□□ 0.52
CCNL1-217ENST00000476367 PDE6BP35913 854 aa18.29■□□□□ 0.52
CCNL1-217ENST00000476367 CWF19L2Q2TBE0 894 aaKnown RBP18.29■□□□□ 0.52
CCNL1-217ENST00000476367 BEND3Q5T5X7 828 aa18.29■□□□□ 0.52
CCNL1-217ENST00000476367 ATF7IPQ6VMQ6 1270 aa18.29■□□□□ 0.52
CCNL1-217ENST00000476367 C2CD5Q86YS7 1000 aa18.29■□□□□ 0.52
CCNL1-217ENST00000476367 FRAT1Q92837 279 aaPredicted RBP18.29■□□□□ 0.52
CCNL1-217ENST00000476367 ABCC4O15439 1325 aa18.29■□□□□ 0.52
CCNL1-217ENST00000476367 SYNE4Q8N205 404 aa18.28■□□□□ 0.52
CCNL1-217ENST00000476367 SH3TC1Q8TE82 1336 aa18.28■□□□□ 0.52
CCNL1-217ENST00000476367 H0YIN7 160 aa18.27■□□□□ 0.52
CCNL1-217ENST00000476367 TRIM28Q13263 835 aaKnown RBP18.27■□□□□ 0.52
CCNL1-217ENST00000476367 RIC1Q4ADV7 1423 aa18.27■□□□□ 0.52
CCNL1-217ENST00000476367 SLC4A10Q6U841 1118 aa18.27■□□□□ 0.52
CCNL1-217ENST00000476367 CWC25Q9NXE8 425 aaPredicted RBP18.27■□□□□ 0.52
CCNL1-217ENST00000476367 ARFGEF1Q9Y6D6 1849 aa18.27■□□□□ 0.52
CCNL1-217ENST00000476367 KCNA3P22001 575 aa18.27■□□□□ 0.51
CCNL1-217ENST00000476367 GPR162Q16538 588 aa18.27■□□□□ 0.51
CCNL1-217ENST00000476367 C20orf194Q5TEA3 1177 aa18.27■□□□□ 0.51
CCNL1-217ENST00000476367 CCDC191Q8NCU4 936 aa18.27■□□□□ 0.51
CCNL1-217ENST00000476367 FAM89AQ96GI7 184 aa18.27■□□□□ 0.51
CCNL1-217ENST00000476367 NEURL1BA8MQ27 555 aa18.26■□□□□ 0.51
CCNL1-217ENST00000476367 ZKSCAN2Q63HK3 967 aa18.26■□□□□ 0.51
CCNL1-217ENST00000476367 CLUAP1Q96AJ1 413 aa18.26■□□□□ 0.51
CCNL1-217ENST00000476367 MYH3P11055 1940 aa18.26■□□□□ 0.51
CCNL1-217ENST00000476367 HCLS1P14317 486 aaPredicted RBP18.25■□□□□ 0.51
CCNL1-217ENST00000476367 YBX3P16989 372 aaKnown RBP eCLIP18.25■□□□□ 0.51
CCNL1-217ENST00000476367 JARID2Q92833 1246 aaPredicted RBP18.25■□□□□ 0.51
CCNL1-217ENST00000476367 ZNF622Q969S3 477 aaKnown RBP eCLIP18.25■□□□□ 0.512e-12■■■□□ 14.8
CCNL1-217ENST00000476367 PIM2Q9P1W9 311 aa18.25■□□□□ 0.51
CCNL1-217ENST00000476367 BCS1LQ9Y276 419 aa18.25■□□□□ 0.51
CCNL1-217ENST00000476367 DCAF8L1A6NGE4 600 aa18.24■□□□□ 0.51
CCNL1-217ENST00000476367 C3orf67Q6ZVT6 689 aa18.24■□□□□ 0.51
CCNL1-217ENST00000476367 LINS1Q8NG48 757 aa18.24■□□□□ 0.51
CCNL1-217ENST00000476367 SLX4Q8IY92 1834 aa18.24■□□□□ 0.51
CCNL1-217ENST00000476367 SRGNP10124 158 aa18.23■□□□□ 0.51
CCNL1-217ENST00000476367 ZBTB38Q8NAP3 1195 aaPredicted RBP18.23■□□□□ 0.51
CCNL1-217ENST00000476367 PANK1Q8TE04 598 aa18.23■□□□□ 0.51
CCNL1-217ENST00000476367 API5Q9BZZ5 524 aaKnown RBP18.23■□□□□ 0.51
CCNL1-217ENST00000476367 TAF1P21675 1872 aa18.23■□□□□ 0.51
CCNL1-217ENST00000476367 IPO8O15397 1037 aaKnown RBP18.23■□□□□ 0.51
CCNL1-217ENST00000476367 CASP7P55210 303 aa18.23■□□□□ 0.51
CCNL1-217ENST00000476367 RRP1P56182 461 aaKnown RBP18.23■□□□□ 0.51
CCNL1-217ENST00000476367 INTS3Q68E01 1043 aaKnown RBP18.23■□□□□ 0.51
CCNL1-217ENST00000476367 PDZRN3Q9UPQ7 1066 aa18.23■□□□□ 0.51
CCNL1-217ENST00000476367 SUPT16HQ9Y5B9 1047 aaKnown RBP18.23■□□□□ 0.51
CCNL1-217ENST00000476367 IRS4O14654 1257 aaPredicted RBP18.22■□□□□ 0.51
CCNL1-217ENST00000476367 PCCAP05165 728 aaPredicted RBP18.22■□□□□ 0.51
CCNL1-217ENST00000476367 GCKRQ14397 625 aa18.22■□□□□ 0.51
CCNL1-217ENST00000476367 DALRD3Q5D0E6 543 aaKnown RBP18.22■□□□□ 0.51
CCNL1-217ENST00000476367 TMEM57Q8N5G2 664 aa18.22■□□□□ 0.51
CCNL1-217ENST00000476367 RPGRQ92834 1020 aaKnown RBP18.22■□□□□ 0.51
CCNL1-217ENST00000476367 NLRP3Q96P20 1036 aa18.22■□□□□ 0.51
CCNL1-217ENST00000476367 KLRG2A4D1S0 409 aaPredicted RBP18.21■□□□□ 0.51
CCNL1-217ENST00000476367 SLC10A5Q5PT55 438 aa18.21■□□□□ 0.51
CCNL1-217ENST00000476367 UBE3BQ7Z3V4 1068 aa18.21■□□□□ 0.51
CCNL1-217ENST00000476367 MASTLQ96GX5 879 aa18.21■□□□□ 0.51
CCNL1-217ENST00000476367 SRCIN1Q9C0H9 1055 aa18.21■□□□□ 0.51
CCNL1-217ENST00000476367 NPR1P16066 1061 aa18.2■□□□□ 0.5
CCNL1-217ENST00000476367 CRY2Q49AN0 593 aa18.2■□□□□ 0.5
CCNL1-217ENST00000476367 STYK1Q6J9G0 422 aa18.2■□□□□ 0.5
CCNL1-217ENST00000476367 DZIP1LQ8IYY4 767 aaKnown RBP18.2■□□□□ 0.5
CCNL1-217ENST00000476367 TTLL6Q8N841 843 aa18.2■□□□□ 0.5
CCNL1-217ENST00000476367 USP44Q9H0E7 712 aa18.2■□□□□ 0.5
CCNL1-217ENST00000476367 UTYO14607 1347 aa18.19■□□□□ 0.5
CCNL1-217ENST00000476367 H7C1W4 665 aa18.19■□□□□ 0.5
CCNL1-217ENST00000476367 ALDH1L1O75891 902 aa18.19■□□□□ 0.5
CCNL1-217ENST00000476367 PRPF40BQ6NWY9 871 aaKnown RBP18.19■□□□□ 0.5
CCNL1-217ENST00000476367 ZNF219Q9P2Y4 722 aaPredicted RBP18.19■□□□□ 0.5
CCNL1-217ENST00000476367 CDHR2Q9BYE9 1310 aa18.18■□□□□ 0.5
CCNL1-217ENST00000476367 NBPF7P0C2Y1 421 aaPredicted RBP18.18■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 95.1 ms