RNA–Protein interactions for RNA: ENST00000476350.1

MACF1-216, Transcript of microtubule-actin crosslinking factor 1, humanhuman

TSL 2

Gene MACF1, Length 5,304 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1-216ENST00000476350 HTATSF1O43719 755 aaKnown RBP10.05□□□□□ -0.8
MACF1-216ENST00000476350 SUPT20HQ8NEM7 779 aa10.05□□□□□ -0.8
MACF1-216ENST00000476350 STAP2Q9UGK3 403 aa10.05□□□□□ -0.8
MACF1-216ENST00000476350 IL2RBP14784 551 aa10.04□□□□□ -0.8
MACF1-216ENST00000476350 ZSCAN29Q8IWY8 852 aaPredicted RBP10.04□□□□□ -0.8
MACF1-216ENST00000476350 NYXQ9GZU5 481 aa10.04□□□□□ -0.8
MACF1-216ENST00000476350 C17orf53Q8N3J3 647 aaPredicted RBP10.04□□□□□ -0.8
MACF1-216ENST00000476350 IL1RAPL2Q9NP60 686 aa10.04□□□□□ -0.8
MACF1-216ENST00000476350 SMC3Q9UQE7 1217 aa10.04□□□□□ -0.8
MACF1-216ENST00000476350 OVOS2A0A0J9YW53 1432 aa10.04□□□□□ -0.8
MACF1-216ENST00000476350 OVOS2Q6IE36 1432 aa10.04□□□□□ -0.8
MACF1-216ENST00000476350 UBTFL1P0CB47 393 aaPredicted RBP10.04□□□□□ -0.8
MACF1-216ENST00000476350 UBE2HP62256 183 aa10.04□□□□□ -0.8
MACF1-216ENST00000476350 DDX46Q7L014 1031 aaKnown RBP10.04□□□□□ -0.8
MACF1-216ENST00000476350 ZCRB1Q8TBF4 217 aaKnown RBP10.04□□□□□ -0.8
MACF1-216ENST00000476350 SNX14Q9Y5W7 946 aa10.04□□□□□ -0.8
MACF1-216ENST00000476350 ERICH2A1L162 156 aa10.04□□□□□ -0.8
MACF1-216ENST00000476350 IL17RAQ96F46 866 aa10.04□□□□□ -0.8
MACF1-216ENST00000476350 LRRC37A3O60309 1634 aa10.04□□□□□ -0.8
MACF1-216ENST00000476350 STX6O43752 255 aa10.03□□□□□ -0.8
MACF1-216ENST00000476350 F13A1P00488 732 aa10.03□□□□□ -0.8
MACF1-216ENST00000476350 CNTROBQ8N137 903 aa10.03□□□□□ -0.8
MACF1-216ENST00000476350 PRR36Q9H6K5 1346 aa10.03□□□□□ -0.8
MACF1-216ENST00000476350 N4BP2Q86UW6 1770 aaPredicted RBP10.03□□□□□ -0.8
MACF1-216ENST00000476350 HMGN5P82970 282 aaKnown RBP10.03□□□□□ -0.8
MACF1-216ENST00000476350 TRDNQ13061 729 aa10.03□□□□□ -0.8
MACF1-216ENST00000476350 JARID2Q92833 1246 aaPredicted RBP10.03□□□□□ -0.8
MACF1-216ENST00000476350 LARP6Q9BRS8 491 aaKnown RBP10.03□□□□□ -0.8
MACF1-216ENST00000476350 ATP6V1DQ9Y5K8 247 aa10.03□□□□□ -0.8
MACF1-216ENST00000476350 RAB11FIP3O75154 756 aa10.03□□□□□ -0.8
MACF1-216ENST00000476350 KDM4AO75164 1064 aa10.03□□□□□ -0.8
MACF1-216ENST00000476350 HCLS1P14317 486 aaPredicted RBP10.03□□□□□ -0.8
MACF1-216ENST00000476350 AK2P54819 239 aa10.03□□□□□ -0.8
MACF1-216ENST00000476350 KRT27Q7Z3Y8 459 aa10.03□□□□□ -0.8
MACF1-216ENST00000476350 PXDNLA1KZ92 1463 aa10.03□□□□□ -0.8
MACF1-216ENST00000476350 ACEP12821 1306 aa10.03□□□□□ -0.8
MACF1-216ENST00000476350 FIBPO43427 364 aa10.03□□□□□ -0.8
MACF1-216ENST00000476350 GRIN3BO60391 1043 aa10.03□□□□□ -0.8
MACF1-216ENST00000476350 KIF22Q14807 665 aa10.03□□□□□ -0.8
MACF1-216ENST00000476350 MAP3K19Q56UN5 1328 aa10.03□□□□□ -0.8
MACF1-216ENST00000476350 CHAF1AQ13111 956 aaPredicted RBP10.03□□□□□ -0.8
MACF1-216ENST00000476350 IL25Q9H293 177 aa10.03□□□□□ -0.8
MACF1-216ENST00000476350 TTC12Q9H892 705 aaPredicted RBP10.03□□□□□ -0.8
MACF1-216ENST00000476350 ZNF287Q9HBT7 754 aa10.02□□□□□ -0.8
MACF1-216ENST00000476350 EPB41L2O43491 1005 aaKnown RBP10.02□□□□□ -0.81
MACF1-216ENST00000476350 CASTP20810 708 aaKnown RBP10.02□□□□□ -0.81
MACF1-216ENST00000476350 TCIRG1Q13488 830 aa10.02□□□□□ -0.81
MACF1-216ENST00000476350 RASSF8Q8NHQ8 419 aa10.02□□□□□ -0.81
MACF1-216ENST00000476350 BIN2Q9UBW5 565 aaPredicted RBP10.02□□□□□ -0.81
MACF1-216ENST00000476350 PRDM4Q9UKN5 801 aa10.02□□□□□ -0.81
MACF1-216ENST00000476350 TAOK2Q9UL54 1235 aa10.02□□□□□ -0.81
MACF1-216ENST00000476350 TPM3P06753 285 aa10.02□□□□□ -0.81
MACF1-216ENST00000476350 GJB2P29033 226 aa10.02□□□□□ -0.81
MACF1-216ENST00000476350 AIMP1Q12904 312 aaKnown RBP10.02□□□□□ -0.81
MACF1-216ENST00000476350 RUFY3Q7L099 469 aa10.02□□□□□ -0.81
MACF1-216ENST00000476350 LIMCH1Q9UPQ0 1083 aa10.02□□□□□ -0.81
MACF1-216ENST00000476350 GOLGA6L6A8MZA4 724 aa10.02□□□□□ -0.81
MACF1-216ENST00000476350 TRAPPC3LQ5T215 181 aa10.02□□□□□ -0.81
MACF1-216ENST00000476350 SETDB2Q96T68 719 aa10.02□□□□□ -0.81
MACF1-216ENST00000476350 BTG4Q9NY30 223 aa10.02□□□□□ -0.81
MACF1-216ENST00000476350 RAD50Q92878 1312 aa10.02□□□□□ -0.81
MACF1-216ENST00000476350 NPHP4O75161 1426 aaPredicted RBP10.02□□□□□ -0.81
MACF1-216ENST00000476350 SOS1Q07889 1333 aaPredicted RBP10.01□□□□□ -0.81
MACF1-216ENST00000476350 OTUD7BQ6GQQ9 843 aa10.01□□□□□ -0.81
MACF1-216ENST00000476350 LSG1Q9H089 658 aaKnown RBP10.01□□□□□ -0.81
MACF1-216ENST00000476350 SPON1Q9HCB6 807 aa10.01□□□□□ -0.81
MACF1-216ENST00000476350 CEP170BQ9Y4F5 1589 aaPredicted RBP10.01□□□□□ -0.81
MACF1-216ENST00000476350 SPATA31A6Q5VVP1 1343 aa10.01□□□□□ -0.81
MACF1-216ENST00000476350 MAP3K9P80192 1104 aa10.01□□□□□ -0.81
MACF1-216ENST00000476350 SAMD1Q6SPF0 538 aaPredicted RBP10.01□□□□□ -0.81
MACF1-216ENST00000476350 CWC27Q6UX04 472 aaKnown RBP10.01□□□□□ -0.81
MACF1-216ENST00000476350 USP6P35125 1406 aa10.01□□□□□ -0.81
MACF1-216ENST00000476350 GIMAP6Q6P9H5 292 aa10.01□□□□□ -0.81
MACF1-216ENST00000476350 SPC24Q8NBT2 197 aa10.01□□□□□ -0.81
MACF1-216ENST00000476350 SIRT1Q96EB6 747 aa10.01□□□□□ -0.81
MACF1-216ENST00000476350 PDRG1Q9NUG6 133 aa10.01□□□□□ -0.81
MACF1-216ENST00000476350 GNAT3A8MTJ3 354 aa10□□□□□ -0.81
MACF1-216ENST00000476350 C6orf229H3BNL8 230 aa10□□□□□ -0.81
MACF1-216ENST00000476350 MPHOSPH10O00566 681 aaKnown RBP10□□□□□ -0.81
MACF1-216ENST00000476350 SURF6O75683 361 aaKnown RBP10□□□□□ -0.81
MACF1-216ENST00000476350 NBPF6Q5VWK0 638 aa10□□□□□ -0.81
MACF1-216ENST00000476350 NBPF5PQ86XG9 351 aaPredicted RBP10□□□□□ -0.81
MACF1-216ENST00000476350 CCDC83Q8IWF9 413 aa10□□□□□ -0.81
MACF1-216ENST00000476350 TSC1Q92574 1164 aa10□□□□□ -0.81
MACF1-216ENST00000476350 NBPF4Q96M43 638 aa10□□□□□ -0.81
MACF1-216ENST00000476350 SYT1P21579 422 aa10□□□□□ -0.81
MACF1-216ENST00000476350 PPP4R3BQ5MIZ7 849 aa10□□□□□ -0.81
MACF1-216ENST00000476350 TTC14Q96N46 770 aa10□□□□□ -0.81
MACF1-216ENST00000476350 CDC5LQ99459 802 aaKnown RBP10□□□□□ -0.81
MACF1-216ENST00000476350 USP31Q70CQ4 1352 aa10□□□□□ -0.81
MACF1-216ENST00000476350 JCADQ9P266 1359 aa10□□□□□ -0.81
MACF1-216ENST00000476350 GOLGA6L4A6NEF3 574 aa10□□□□□ -0.81
MACF1-216ENST00000476350 APPP05067 770 aa10□□□□□ -0.81
MACF1-216ENST00000476350 GTF2F1P35269 517 aaKnown RBP eCLIP10□□□□□ -0.81
MACF1-216ENST00000476350 SPTLC3Q9NUV7 552 aa10□□□□□ -0.81
MACF1-216ENST00000476350 ANKIB1Q9P2G1 1089 aa10□□□□□ -0.81
MACF1-216ENST00000476350 SGSM2O43147 1006 aa10□□□□□ -0.81
MACF1-216ENST00000476350 FMNL2Q96PY5 1086 aa10□□□□□ -0.81
MACF1-216ENST00000476350 CCNL1Q9UK58 526 aaPredicted RBP10□□□□□ -0.81
MACF1-216ENST00000476350 SBNO1A3KN83 1393 aa10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms