RNA–Protein interactions for RNA: ENST00000476286.1

NCK1-205, Transcript of NCK adaptor protein 1, humanhuman

TSL 4

Gene NCK1, Length 557 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCK1-205ENST00000476286 CCDC93Q567U6 631 aa20.87■□□□□ 0.93
NCK1-205ENST00000476286 UTP14AQ9BVJ6 771 aaKnown RBP20.87■□□□□ 0.93
NCK1-205ENST00000476286 TIAM2Q8IVF5 1701 aa20.87■□□□□ 0.93
NCK1-205ENST00000476286 GLTPD2A6NH11 291 aa20.86■□□□□ 0.93
NCK1-205ENST00000476286 HOXA10P31260 410 aaPredicted RBP20.86■□□□□ 0.93
NCK1-205ENST00000476286 RNF123Q5XPI4 1314 aa20.85■□□□□ 0.93
NCK1-205ENST00000476286 SLC10A5Q5PT55 438 aa20.85■□□□□ 0.93
NCK1-205ENST00000476286 OLFM4Q6UX06 510 aa20.85■□□□□ 0.93
NCK1-205ENST00000476286 NLRP10Q86W26 655 aa20.85■□□□□ 0.93
NCK1-205ENST00000476286 PLBD2Q8NHP8 589 aa20.85■□□□□ 0.93
NCK1-205ENST00000476286 RRAGCQ9HB90 399 aa20.85■□□□□ 0.93
NCK1-205ENST00000476286 HYPKQ9NX55 129 aa20.85■□□□□ 0.93
NCK1-205ENST00000476286 ANKRD36CQ5JPF3 1778 aa20.85■□□□□ 0.93
NCK1-205ENST00000476286 CCDC88AQ3V6T2 1871 aa20.84■□□□□ 0.93
NCK1-205ENST00000476286 NCBP3Q53F19 620 aaKnown RBP20.84■□□□□ 0.93
NCK1-205ENST00000476286 ANKRD13DQ6ZTN6 518 aa20.84■□□□□ 0.93
NCK1-205ENST00000476286 C3orf67Q6ZVT6 689 aa20.84■□□□□ 0.93
NCK1-205ENST00000476286 C8orf58Q8NAV2 365 aa20.84■□□□□ 0.93
NCK1-205ENST00000476286 RPGRQ92834 1020 aaKnown RBP20.84■□□□□ 0.93
NCK1-205ENST00000476286 ELL2O00472 640 aaPredicted RBP20.83■□□□□ 0.93
NCK1-205ENST00000476286 HSPA6P17066 643 aa20.83■□□□□ 0.93
NCK1-205ENST00000476286 FKBP4Q02790 459 aaKnown RBP eCLIP20.83■□□□□ 0.93
NCK1-205ENST00000476286 WWC1Q8IX03 1113 aa20.83■□□□□ 0.93
NCK1-205ENST00000476286 RTKN2Q8IZC4 609 aa20.83■□□□□ 0.93
NCK1-205ENST00000476286 NLRP3Q96P20 1036 aa20.83■□□□□ 0.93
NCK1-205ENST00000476286 SNED1Q8TER0 1413 aa20.82■□□□□ 0.92
NCK1-205ENST00000476286 RBM46Q8TBY0 533 aaKnown RBP20.82■□□□□ 0.92
NCK1-205ENST00000476286 RBM17Q96I25 401 aaKnown RBP20.82■□□□□ 0.92
NCK1-205ENST00000476286 CRAMP1Q96RY5 1269 aa20.82■□□□□ 0.92
NCK1-205ENST00000476286 DICER1Q9UPY3 1922 aaKnown RBP20.81■□□□□ 0.92
NCK1-205ENST00000476286 DPY19L2Q6NUT2 758 aa20.81■□□□□ 0.92
NCK1-205ENST00000476286 C16orf71Q8IYS4 520 aaPredicted RBP20.81■□□□□ 0.92
NCK1-205ENST00000476286 ISCA1Q9BUE6 129 aa20.8■□□□□ 0.92
NCK1-205ENST00000476286 TRMT112Q9UI30 125 aaKnown RBP20.8■□□□□ 0.92
NCK1-205ENST00000476286 VEGFAP15692 232 aaPredicted RBP20.79■□□□□ 0.92
NCK1-205ENST00000476286 CC2D2BQ6DHV5 1058 aa20.79■□□□□ 0.92
NCK1-205ENST00000476286 SYNE4Q8N205 404 aa20.79■□□□□ 0.92
NCK1-205ENST00000476286 TSPYL6Q8N831 410 aa20.79■□□□□ 0.92
NCK1-205ENST00000476286 TSR2Q969E8 191 aaKnown RBP20.79■□□□□ 0.92
NCK1-205ENST00000476286 PHAXQ9H814 394 aaKnown RBP20.79■□□□□ 0.92
NCK1-205ENST00000476286 ZNF277Q9NRM2 450 aaPredicted RBP20.79■□□□□ 0.92
NCK1-205ENST00000476286 IL16Q14005 1332 aa20.78■□□□□ 0.92
NCK1-205ENST00000476286 SH3TC1Q8TE82 1336 aa20.78■□□□□ 0.92
NCK1-205ENST00000476286 PSMD1Q99460 953 aa20.78■□□□□ 0.92
NCK1-205ENST00000476286 CHMP4AQ9BY43 222 aa20.78■□□□□ 0.92
NCK1-205ENST00000476286 POTECB2RU33 542 aa20.77■□□□□ 0.92
NCK1-205ENST00000476286 PPEF1O14829 653 aaPredicted RBP20.77■□□□□ 0.92
NCK1-205ENST00000476286 HCLS1P14317 486 aaPredicted RBP20.77■□□□□ 0.92
NCK1-205ENST00000476286 CCDC30Q5VVM6 783 aa20.77■□□□□ 0.92
NCK1-205ENST00000476286 WDR90Q96KV7 1748 aa20.77■□□□□ 0.92
NCK1-205ENST00000476286 ATP5J2-PTCD1G3V325 749 aa20.76■□□□□ 0.91
NCK1-205ENST00000476286 FSTL1Q12841 308 aa20.76■□□□□ 0.91
NCK1-205ENST00000476286 TRIM28Q13263 835 aaKnown RBP20.76■□□□□ 0.91
NCK1-205ENST00000476286 GRIPAP1Q4V328 841 aa20.76■□□□□ 0.91
NCK1-205ENST00000476286 ABCC4O15439 1325 aa20.76■□□□□ 0.91
NCK1-205ENST00000476286 IARSP41252 1262 aaKnown RBP20.75■□□□□ 0.91
NCK1-205ENST00000476286 GOLGA2Q08379 1002 aa20.75■□□□□ 0.91
NCK1-205ENST00000476286 RIC3Q7Z5B4 369 aa20.75■□□□□ 0.91
NCK1-205ENST00000476286 SLC51AQ86UW1 340 aa20.75■□□□□ 0.91
NCK1-205ENST00000476286 ZNF428Q96B54 188 aa20.75■□□□□ 0.91
NCK1-205ENST00000476286 DDNO94850 711 aaPredicted RBP20.74■□□□□ 0.91
NCK1-205ENST00000476286 LAMB2P55268 1798 aa20.73■□□□□ 0.91
NCK1-205ENST00000476286 WDR63Q8IWG1 891 aa20.73■□□□□ 0.91
NCK1-205ENST00000476286 FAM89AQ96GI7 184 aa20.73■□□□□ 0.91
NCK1-205ENST00000476286 ATP6V0A2Q9Y487 856 aa20.73■□□□□ 0.91
NCK1-205ENST00000476286 TCERG1O14776 1098 aaKnown RBP20.72■□□□□ 0.91
NCK1-205ENST00000476286 BBOX1O75936 387 aa20.72■□□□□ 0.91
NCK1-205ENST00000476286 APLP1P51693 650 aa20.72■□□□□ 0.91
NCK1-205ENST00000476286 TWISTNBQ3B726 338 aaPredicted RBP20.72■□□□□ 0.91
NCK1-205ENST00000476286 SMC1BQ8NDV3 1235 aa20.72■□□□□ 0.91
NCK1-205ENST00000476286 CEP350Q5VT06 3117 aa20.72■□□□□ 0.91
NCK1-205ENST00000476286 FZD9O00144 591 aa20.71■□□□□ 0.91
NCK1-205ENST00000476286 DDX46Q7L014 1031 aaKnown RBP20.71■□□□□ 0.91
NCK1-205ENST00000476286 FAM9BQ8IZU0 186 aa20.71■□□□□ 0.91
NCK1-205ENST00000476286 L3MBTL3Q96JM7 780 aaPredicted RBP20.71■□□□□ 0.91
NCK1-205ENST00000476286 SALL2Q9Y467 1007 aaPredicted RBP20.71■□□□□ 0.91
NCK1-205ENST00000476286 ZNF541Q9H0D2 1346 aa20.71■□□□□ 0.91
NCK1-205ENST00000476286 FANCIQ9NVI1 1328 aa20.71■□□□□ 0.91
NCK1-205ENST00000476286 DDX60Q8IY21 1712 aaKnown RBP20.7■□□□□ 0.9
NCK1-205ENST00000476286 DDX58O95786 925 aaKnown RBP20.7■□□□□ 0.9
NCK1-205ENST00000476286 GRAPQ13588 217 aa20.7■□□□□ 0.9
NCK1-205ENST00000476286 SF3B3Q15393 1217 aaKnown RBP20.7■□□□□ 0.9
NCK1-205ENST00000476286 GRAPLQ8TC17 118 aaPredicted RBP20.7■□□□□ 0.9
NCK1-205ENST00000476286 MYD88Q99836 296 aa20.7■□□□□ 0.9
NCK1-205ENST00000476286 SP8Q8IXZ3 490 aa20.69■□□□□ 0.9
NCK1-205ENST00000476286 ZBTB38Q8NAP3 1195 aaPredicted RBP20.69■□□□□ 0.9
NCK1-205ENST00000476286 JDP2Q8WYK2 163 aa20.69■□□□□ 0.9
NCK1-205ENST00000476286 METTL22Q9BUU2 404 aaPredicted RBP20.69■□□□□ 0.9
NCK1-205ENST00000476286 STK31Q9BXU1 1019 aa20.69■□□□□ 0.9
NCK1-205ENST00000476286 TMX4Q9H1E5 349 aaPredicted RBP20.69■□□□□ 0.9
NCK1-205ENST00000476286 COL4A5P29400 1685 aa20.69■□□□□ 0.9
NCK1-205ENST00000476286 IRS4O14654 1257 aaPredicted RBP20.68■□□□□ 0.9
NCK1-205ENST00000476286 RTL5Q5HYW3 569 aaPredicted RBP20.68■□□□□ 0.9
NCK1-205ENST00000476286 CCDC191Q8NCU4 936 aa20.68■□□□□ 0.9
NCK1-205ENST00000476286 IQCA1LA6NCM1 817 aa20.67■□□□□ 0.9
NCK1-205ENST00000476286 KSR2Q6VAB6 950 aa20.67■□□□□ 0.9
NCK1-205ENST00000476286 RTFDC1Q9BY42 306 aaPredicted RBP20.67■□□□□ 0.9
NCK1-205ENST00000476286 MAP3K2Q9Y2U5 619 aa20.67■□□□□ 0.9
NCK1-205ENST00000476286 TMC4Q7Z404 712 aa20.66■□□□□ 0.9
NCK1-205ENST00000476286 LARGE2Q8N3Y3 721 aa20.66■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms