RNA–Protein interactions for RNA: ENST00000476237.5

NMD3-208, Transcript of NMD3 ribosome export adaptor, humanhuman

TSL 5

Gene NMD3, Length 685 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NMD3-208ENST00000476237 LTBP3Q9NS15 1303 aa28.38■■■□□ 2.13
NMD3-208ENST00000476237 ANKRD13DQ6ZTN6 518 aa28.37■■■□□ 2.13
NMD3-208ENST00000476237 TAOK3Q9H2K8 898 aa28.37■■■□□ 2.13
NMD3-208ENST00000476237 NMRK2Q9NPI5 230 aa28.37■■■□□ 2.13
NMD3-208ENST00000476237 NLRP10Q86W26 655 aa28.36■■■□□ 2.13
NMD3-208ENST00000476237 KDM2BQ8NHM5 1336 aa28.36■■■□□ 2.13
NMD3-208ENST00000476237 CCDC93Q567U6 631 aa28.35■■■□□ 2.13
NMD3-208ENST00000476237 SLC10A5Q5PT55 438 aa28.35■■■□□ 2.13
NMD3-208ENST00000476237 FER1L6Q2WGJ9 1857 aa28.35■■■□□ 2.13
NMD3-208ENST00000476237 CACNA1SQ13698 1873 aa28.34■■■□□ 2.13
NMD3-208ENST00000476237 HOXA10P31260 410 aaPredicted RBP28.34■■■□□ 2.13
NMD3-208ENST00000476237 RNF123Q5XPI4 1314 aa28.34■■■□□ 2.13
NMD3-208ENST00000476237 C3orf67Q6ZVT6 689 aa28.33■■■□□ 2.13
NMD3-208ENST00000476237 RPGRQ92834 1020 aaKnown RBP28.33■■■□□ 2.13
NMD3-208ENST00000476237 TSR2Q969E8 191 aaKnown RBP28.33■■■□□ 2.13
NMD3-208ENST00000476237 IL16Q14005 1332 aa28.33■■■□□ 2.13
NMD3-208ENST00000476237 TSPYL6Q8N831 410 aa28.32■■■□□ 2.12
NMD3-208ENST00000476237 NLRP3Q96P20 1036 aa28.32■■■□□ 2.12
NMD3-208ENST00000476237 OLFM4Q6UX06 510 aa28.31■■■□□ 2.12
NMD3-208ENST00000476237 CHMP4AQ9BY43 222 aa28.31■■■□□ 2.12
NMD3-208ENST00000476237 ANKRD36CQ5JPF3 1778 aa28.3■■■□□ 2.12
NMD3-208ENST00000476237 GLTPD2A6NH11 291 aa28.3■■■□□ 2.12
NMD3-208ENST00000476237 CCDC30Q5VVM6 783 aa28.3■■■□□ 2.12
NMD3-208ENST00000476237 RTKN2Q8IZC4 609 aa28.3■■■□□ 2.12
NMD3-208ENST00000476237 RBM17Q96I25 401 aaKnown RBP28.3■■■□□ 2.12
NMD3-208ENST00000476237 CRAMP1Q96RY5 1269 aa28.3■■■□□ 2.12
NMD3-208ENST00000476237 ISCA1Q9BUE6 129 aa28.3■■■□□ 2.12
NMD3-208ENST00000476237 PHAXQ9H814 394 aaKnown RBP28.3■■■□□ 2.12
NMD3-208ENST00000476237 TRMT112Q9UI30 125 aaKnown RBP28.3■■■□□ 2.12
NMD3-208ENST00000476237 FAM9BQ8IZU0 186 aa28.29■■■□□ 2.12
NMD3-208ENST00000476237 RRAGCQ9HB90 399 aa28.29■■■□□ 2.12
NMD3-208ENST00000476237 CCDC88AQ3V6T2 1871 aa28.29■■■□□ 2.12
NMD3-208ENST00000476237 TOMM70O94826 608 aa28.28■■■□□ 2.12
NMD3-208ENST00000476237 FKBP4Q02790 459 aaKnown RBP eCLIP28.28■■■□□ 2.12
NMD3-208ENST00000476237 SYNE4Q8N205 404 aa28.28■■■□□ 2.12
NMD3-208ENST00000476237 SALL2Q9Y467 1007 aaPredicted RBP28.28■■■□□ 2.12
NMD3-208ENST00000476237 SH3TC1Q8TE82 1336 aa28.27■■■□□ 2.12
NMD3-208ENST00000476237 ATP5J2-PTCD1G3V325 749 aa28.26■■■□□ 2.11
NMD3-208ENST00000476237 HCLS1P14317 486 aaPredicted RBP28.26■■■□□ 2.11
NMD3-208ENST00000476237 GOLGA2Q08379 1002 aa28.26■■■□□ 2.11
NMD3-208ENST00000476237 RIC3Q7Z5B4 369 aa28.26■■■□□ 2.11
NMD3-208ENST00000476237 WDR63Q8IWG1 891 aa28.26■■■□□ 2.11
NMD3-208ENST00000476237 TIAM2Q8IVF5 1701 aa28.26■■■□□ 2.11
NMD3-208ENST00000476237 TRIM28Q13263 835 aaKnown RBP28.25■■■□□ 2.11
NMD3-208ENST00000476237 CC2D2BQ6DHV5 1058 aa28.25■■■□□ 2.11
NMD3-208ENST00000476237 DPY19L2Q6NUT2 758 aa28.24■■■□□ 2.11
NMD3-208ENST00000476237 ZNF428Q96B54 188 aa28.24■■■□□ 2.11
NMD3-208ENST00000476237 SNED1Q8TER0 1413 aa28.24■■■□□ 2.11
NMD3-208ENST00000476237 TWISTNBQ3B726 338 aaPredicted RBP28.23■■■□□ 2.11
NMD3-208ENST00000476237 C16orf71Q8IYS4 520 aaPredicted RBP28.23■■■□□ 2.11
NMD3-208ENST00000476237 ZNF277Q9NRM2 450 aaPredicted RBP28.23■■■□□ 2.11
NMD3-208ENST00000476237 DICER1Q9UPY3 1922 aaKnown RBP28.23■■■□□ 2.11
NMD3-208ENST00000476237 PPEF1O14829 653 aaPredicted RBP28.22■■■□□ 2.11
NMD3-208ENST00000476237 FANCIQ9NVI1 1328 aa28.21■■■□□ 2.11
NMD3-208ENST00000476237 RBM46Q8TBY0 533 aaKnown RBP28.21■■■□□ 2.11
NMD3-208ENST00000476237 FAM89AQ96GI7 184 aa28.21■■■□□ 2.11
NMD3-208ENST00000476237 PSMD1Q99460 953 aa28.21■■■□□ 2.11
NMD3-208ENST00000476237 ABCC4O15439 1325 aa28.2■■■□□ 2.11
NMD3-208ENST00000476237 VEGFAP15692 232 aaPredicted RBP28.2■■■□□ 2.1
NMD3-208ENST00000476237 HSPA6P17066 643 aa28.2■■■□□ 2.1
NMD3-208ENST00000476237 GRIPAP1Q4V328 841 aa28.2■■■□□ 2.1
NMD3-208ENST00000476237 DDX58O95786 925 aaKnown RBP28.19■■■□□ 2.1
NMD3-208ENST00000476237 STK31Q9BXU1 1019 aa28.19■■■□□ 2.1
NMD3-208ENST00000476237 TCERG1O14776 1098 aaKnown RBP28.18■■■□□ 2.1
NMD3-208ENST00000476237 IARSP41252 1262 aaKnown RBP28.18■■■□□ 2.1
NMD3-208ENST00000476237 SLC51AQ86UW1 340 aa28.18■■■□□ 2.1
NMD3-208ENST00000476237 MYD88Q99836 296 aa28.18■■■□□ 2.1
NMD3-208ENST00000476237 POTECB2RU33 542 aa28.17■■■□□ 2.1
NMD3-208ENST00000476237 BBOX1O75936 387 aa28.17■■■□□ 2.1
NMD3-208ENST00000476237 DDX46Q7L014 1031 aaKnown RBP28.17■■■□□ 2.1
NMD3-208ENST00000476237 METTL22Q9BUU2 404 aaPredicted RBP28.17■■■□□ 2.1
NMD3-208ENST00000476237 ATP6V0A2Q9Y487 856 aa28.17■■■□□ 2.1
NMD3-208ENST00000476237 LAMB2P55268 1798 aa28.15■■■□□ 2.1
NMD3-208ENST00000476237 DDNO94850 711 aaPredicted RBP28.15■■■□□ 2.1
NMD3-208ENST00000476237 RTL5Q5HYW3 569 aaPredicted RBP28.15■■■□□ 2.1
NMD3-208ENST00000476237 KSR2Q6VAB6 950 aa28.15■■■□□ 2.1
NMD3-208ENST00000476237 ZBTB38Q8NAP3 1195 aaPredicted RBP28.15■■■□□ 2.1
NMD3-208ENST00000476237 CCDC191Q8NCU4 936 aa28.15■■■□□ 2.1
NMD3-208ENST00000476237 SPINK5Q9NQ38 1064 aaPredicted RBP28.15■■■□□ 2.1
NMD3-208ENST00000476237 MAP3K2Q9Y2U5 619 aa28.15■■■□□ 2.1
NMD3-208ENST00000476237 IRS4O14654 1257 aaPredicted RBP28.14■■■□□ 2.1
NMD3-208ENST00000476237 SLC4A2P04920 1241 aa28.14■■■□□ 2.1
NMD3-208ENST00000476237 GRAPQ13588 217 aa28.14■■■□□ 2.1
NMD3-208ENST00000476237 SF3B3Q15393 1217 aaKnown RBP28.14■■■□□ 2.1
NMD3-208ENST00000476237 GRAPLQ8TC17 118 aaPredicted RBP28.14■■■□□ 2.1
NMD3-208ENST00000476237 TMX4Q9H1E5 349 aaPredicted RBP28.14■■■□□ 2.1
NMD3-208ENST00000476237 WDR90Q96KV7 1748 aa28.14■■■□□ 2.1
NMD3-208ENST00000476237 PI4KAP2A4QPH2 592 aa28.13■■■□□ 2.09
NMD3-208ENST00000476237 VAMP4O75379 141 aa28.13■■■□□ 2.09
NMD3-208ENST00000476237 EXOSC9Q06265 439 aaKnown RBP28.13■■■□□ 2.09
NMD3-208ENST00000476237 FSTL1Q12841 308 aa28.13■■■□□ 2.09
NMD3-208ENST00000476237 PI4KAP1Q8N8J0 262 aa28.13■■■□□ 2.09
NMD3-208ENST00000476237 G2E3Q7L622 706 aa28.12■■■□□ 2.09
NMD3-208ENST00000476237 SP8Q8IXZ3 490 aa28.12■■■□□ 2.09
NMD3-208ENST00000476237 DDX60Q8IY21 1712 aaKnown RBP28.12■■■□□ 2.09
NMD3-208ENST00000476237 FZD9O00144 591 aa28.11■■■□□ 2.09
NMD3-208ENST00000476237 CWC25Q9NXE8 425 aaPredicted RBP28.11■■■□□ 2.09
NMD3-208ENST00000476237 PCCAP05165 728 aaPredicted RBP28.1■■■□□ 2.09
NMD3-208ENST00000476237 JDP2Q8WYK2 163 aa28.1■■■□□ 2.09
NMD3-208ENST00000476237 MYH16Q9H6N6 1097 aa28.1■■■□□ 2.09
Retrieved 100 of 20,778 RNA–protein pairs in 73 ms