RNA–Protein interactions for RNA: ENST00000476142.1

CCDC66-216, Transcript of coiled-coil domain containing 66, humanhuman

TSL 2

Gene CCDC66, Length 2,783 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66-216ENST00000476142 EPB41L2O43491 1005 aaKnown RBP10.77□□□□□ -0.68
CCDC66-216ENST00000476142 A1BGP04217 495 aa10.77□□□□□ -0.68
CCDC66-216ENST00000476142 NMIQ13287 307 aaPredicted RBP10.77□□□□□ -0.68
CCDC66-216ENST00000476142 CUL4AQ13619 759 aa10.77□□□□□ -0.68
CCDC66-216ENST00000476142 KLHL40Q2TBA0 621 aa10.77□□□□□ -0.68
CCDC66-216ENST00000476142 NBPF14Q5TI25 921 aa10.77□□□□□ -0.68
CCDC66-216ENST00000476142 CAVIN1Q6NZI2 390 aaKnown RBP10.77□□□□□ -0.68
CCDC66-216ENST00000476142 NBPF10Q6P3W6 841 aaKnown RBP10.77□□□□□ -0.68
CCDC66-216ENST00000476142 NBPF15Q8N660 670 aa10.77□□□□□ -0.68
CCDC66-216ENST00000476142 TFCP2Q12800 502 aa10.77□□□□□ -0.69
CCDC66-216ENST00000476142 TTLL7Q6ZT98 887 aa10.77□□□□□ -0.69
CCDC66-216ENST00000476142 GAS2L3Q86XJ1 694 aa10.77□□□□□ -0.69
CCDC66-216ENST00000476142 ZBTB3Q9H5J0 574 aa10.77□□□□□ -0.69
CCDC66-216ENST00000476142 LMBRD1Q9NUN5 540 aa10.77□□□□□ -0.69
CCDC66-216ENST00000476142 SOS2Q07890 1332 aaPredicted RBP10.77□□□□□ -0.69
CCDC66-216ENST00000476142 CRYBG1Q9Y4K1 1723 aa10.77□□□□□ -0.69
CCDC66-216ENST00000476142 AK2P54819 239 aa10.77□□□□□ -0.69
CCDC66-216ENST00000476142 JAKMIP1Q96N16 626 aaKnown RBP10.77□□□□□ -0.69
CCDC66-216ENST00000476142 ABCC6O95255 1503 aa10.76□□□□□ -0.69
CCDC66-216ENST00000476142 LMBR1LQ6UX01 489 aa10.76□□□□□ -0.69
CCDC66-216ENST00000476142 EDC3Q96F86 508 aaKnown RBP10.76□□□□□ -0.69
CCDC66-216ENST00000476142 INTS4Q96HW7 963 aaKnown RBP10.76□□□□□ -0.69
CCDC66-216ENST00000476142 COL5A2P05997 1499 aaPredicted RBP10.76□□□□□ -0.69
CCDC66-216ENST00000476142 ERVV-2B6SEH9 535 aa10.76□□□□□ -0.69
CCDC66-216ENST00000476142 PTPN12Q05209 780 aaKnown RBP10.76□□□□□ -0.69
CCDC66-216ENST00000476142 IL17RAQ96F46 866 aa10.76□□□□□ -0.69
CCDC66-216ENST00000476142 CARD10Q9BWT7 1032 aa10.76□□□□□ -0.69
CCDC66-216ENST00000476142 NDUFB9Q9Y6M9 179 aa10.76□□□□□ -0.69
CCDC66-216ENST00000476142 PKD1L3Q7Z443 1732 aa10.76□□□□□ -0.69
CCDC66-216ENST00000476142 CCDC171Q6TFL3 1326 aa10.75□□□□□ -0.69
CCDC66-216ENST00000476142 HIP1O00291 1037 aa10.75□□□□□ -0.69
CCDC66-216ENST00000476142 DNAJC2Q99543 621 aaKnown RBP10.75□□□□□ -0.69
CCDC66-216ENST00000476142 COPRSQ9NQ92 184 aa10.75□□□□□ -0.69
CCDC66-216ENST00000476142 A0A0D9SFI3 127 aa10.75□□□□□ -0.69
CCDC66-216ENST00000476142 BRD1O95696 1058 aa10.75□□□□□ -0.69
CCDC66-216ENST00000476142 ZKSCAN1P17029 563 aaPredicted RBP10.75□□□□□ -0.69
CCDC66-216ENST00000476142 RFX5P48382 616 aaPredicted RBP10.75□□□□□ -0.69
CCDC66-216ENST00000476142 ADCK5Q3MIX3 580 aa10.75□□□□□ -0.69
CCDC66-216ENST00000476142 TNNI3KQ59H18 835 aa10.75□□□□□ -0.69
CCDC66-216ENST00000476142 RUFY3Q7L099 469 aa10.75□□□□□ -0.69
CCDC66-216ENST00000476142 PDRG1Q9NUG6 133 aa10.75□□□□□ -0.69
CCDC66-216ENST00000476142 DBNLQ9UJU6 430 aaKnown RBP10.75□□□□□ -0.69
CCDC66-216ENST00000476142 RBM8AQ9Y5S9 174 aaKnown RBP10.75□□□□□ -0.69
CCDC66-216ENST00000476142 FPGT-TNNI3KV9GXZ4 949 aa10.75□□□□□ -0.69
CCDC66-216ENST00000476142 PLEKHG2Q9H7P9 1386 aa10.74□□□□□ -0.69
CCDC66-216ENST00000476142 DTNBO60941 627 aa10.74□□□□□ -0.69
CCDC66-216ENST00000476142 TTC14Q96N46 770 aa10.74□□□□□ -0.69
CCDC66-216ENST00000476142 CWC25Q9NXE8 425 aaPredicted RBP10.74□□□□□ -0.69
CCDC66-216ENST00000476142 RBM27Q9P2N5 1060 aaKnown RBP10.74□□□□□ -0.69
CCDC66-216ENST00000476142 ISY1Q9ULR0 285 aaKnown RBP10.74□□□□□ -0.69
CCDC66-216ENST00000476142 LIMCH1Q9UPQ0 1083 aa10.74□□□□□ -0.69
CCDC66-216ENST00000476142 TMOD3Q9NYL9 352 aa10.74□□□□□ -0.69
CCDC66-216ENST00000476142 CYP46A1Q9Y6A2 500 aa10.74□□□□□ -0.69
CCDC66-216ENST00000476142 XIRP1Q702N8 1843 aaKnown RBP10.73□□□□□ -0.69
CCDC66-216ENST00000476142 RABL6Q3YEC7 729 aaPredicted RBP10.73□□□□□ -0.69
CCDC66-216ENST00000476142 TPRNQ4KMQ1 711 aa10.73□□□□□ -0.69
CCDC66-216ENST00000476142 CREB3L3Q68CJ9 461 aa10.73□□□□□ -0.69
CCDC66-216ENST00000476142 GPT2Q8TD30 523 aa10.73□□□□□ -0.69
CCDC66-216ENST00000476142 NEUROD6Q96NK8 337 aa10.73□□□□□ -0.69
CCDC66-216ENST00000476142 DBNDD2Q9BQY9 259 aa10.73□□□□□ -0.69
CCDC66-216ENST00000476142 ERBB4Q15303 1308 aa10.73□□□□□ -0.69
CCDC66-216ENST00000476142 LARGE1O95461 756 aa10.72□□□□□ -0.69
CCDC66-216ENST00000476142 CASP7P55210 303 aa10.72□□□□□ -0.69
CCDC66-216ENST00000476142 ZSCAN23Q3MJ62 389 aa10.72□□□□□ -0.69
CCDC66-216ENST00000476142 CCDC83Q8IWF9 413 aa10.72□□□□□ -0.69
CCDC66-216ENST00000476142 SMC3Q9UQE7 1217 aa10.72□□□□□ -0.69
CCDC66-216ENST00000476142 WDR33Q9C0J8 1336 aaKnown RBP10.72□□□□□ -0.69
CCDC66-216ENST00000476142 FOXO4P98177 505 aa10.72□□□□□ -0.69
CCDC66-216ENST00000476142 NECTIN1Q15223 517 aa10.72□□□□□ -0.69
CCDC66-216ENST00000476142 ZNF589Q86UQ0 364 aaPredicted RBP10.72□□□□□ -0.69
CCDC66-216ENST00000476142 GDPD2Q9HCC8 539 aa10.72□□□□□ -0.69
CCDC66-216ENST00000476142 PARP4Q9UKK3 1724 aaKnown RBP10.72□□□□□ -0.69
CCDC66-216ENST00000476142 H7C1W4 665 aa10.71□□□□□ -0.69
CCDC66-216ENST00000476142 SLC27A2O14975 620 aa10.71□□□□□ -0.69
CCDC66-216ENST00000476142 ATP5JP18859 108 aa10.71□□□□□ -0.69
CCDC66-216ENST00000476142 NKX1-1Q15270 411 aaPredicted RBP10.71□□□□□ -0.69
CCDC66-216ENST00000476142 DDX46Q7L014 1031 aaKnown RBP10.71□□□□□ -0.69
CCDC66-216ENST00000476142 BTG4Q9NY30 223 aa10.71□□□□□ -0.69
CCDC66-216ENST00000476142 ZSCAN21Q9Y5A6 473 aaPredicted RBP10.71□□□□□ -0.69
CCDC66-216ENST00000476142 CHGBP05060 677 aa10.71□□□□□ -0.69
CCDC66-216ENST00000476142 VPS53Q5VIR6 699 aa10.71□□□□□ -0.69
CCDC66-216ENST00000476142 FAM43AQ8N2R8 423 aa10.71□□□□□ -0.69
CCDC66-216ENST00000476142 MAP4K1Q92918 833 aa10.71□□□□□ -0.69
CCDC66-216ENST00000476142 ZNF594Q96JF6 807 aaPredicted RBP10.71□□□□□ -0.69
CCDC66-216ENST00000476142 TCEANC2Q96MN5 208 aa10.71□□□□□ -0.69
CCDC66-216ENST00000476142 CCDC85AQ96PX6 553 aaPredicted RBP10.71□□□□□ -0.69
CCDC66-216ENST00000476142 ZSWIM6Q9HCJ5 1215 aa10.71□□□□□ -0.69
CCDC66-216ENST00000476142 NSFL1CQ9UNZ2 370 aaKnown RBP10.71□□□□□ -0.69
CCDC66-216ENST00000476142 AFDNP55196 1824 aaKnown RBP10.71□□□□□ -0.7
CCDC66-216ENST00000476142 ARFGEF2Q9Y6D5 1785 aa10.71□□□□□ -0.7
CCDC66-216ENST00000476142 RNF20Q5VTR2 975 aa10.71□□□□□ -0.7
CCDC66-216ENST00000476142 ASAP1Q9ULH1 1129 aa10.71□□□□□ -0.7
CCDC66-216ENST00000476142 GLI3P10071 1580 aa10.7□□□□□ -0.7
CCDC66-216ENST00000476142 NASPP49321 788 aaPredicted RBP10.7□□□□□ -0.7
CCDC66-216ENST00000476142 CCDC129Q6ZRS4 1044 aa10.7□□□□□ -0.7
CCDC66-216ENST00000476142 NECAB1Q8N987 351 aa10.7□□□□□ -0.7
CCDC66-216ENST00000476142 KCPQ6ZWJ8 1503 aa10.7□□□□□ -0.7
CCDC66-216ENST00000476142 RPAP1Q9BWH6 1393 aaPredicted RBP10.7□□□□□ -0.7
CCDC66-216ENST00000476142 ADRA2BP18089 450 aa10.7□□□□□ -0.7
CCDC66-216ENST00000476142 PSMA5P28066 241 aa10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms