RNA–Protein interactions for RNA: ENST00000476139.5

TVP23B-202, Transcript of trans-golgi network vesicle protein 23 homolog B, humanhuman

TSL 1 (best) BASIC

Gene TVP23B, Length 2,989 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23B-202ENST00000476139 GOLGA6L22H0YM25 854 aa20.12■□□□□ 0.81
TVP23B-202ENST00000476139 CUL4AQ13619 759 aa20.12■□□□□ 0.81
TVP23B-202ENST00000476139 RFX5P48382 616 aaPredicted RBP20.12■□□□□ 0.81
TVP23B-202ENST00000476139 SKOR2Q2VWA4 1001 aaPredicted RBP20.12■□□□□ 0.81
TVP23B-202ENST00000476139 CARD10Q9BWT7 1032 aa20.11■□□□□ 0.81
TVP23B-202ENST00000476139 STRCQ7RTU9 1775 aa20.11■□□□□ 0.81
TVP23B-202ENST00000476139 EPB41L2O43491 1005 aaKnown RBP20.11■□□□□ 0.81
TVP23B-202ENST00000476139 EDC3Q96F86 508 aaKnown RBP20.11■□□□□ 0.81
TVP23B-202ENST00000476139 ERVV-2B6SEH9 535 aa20.1■□□□□ 0.81
TVP23B-202ENST00000476139 TFCP2Q12800 502 aa20.1■□□□□ 0.81
TVP23B-202ENST00000476139 NDUFB9Q9Y6M9 179 aa20.1■□□□□ 0.81
TVP23B-202ENST00000476139 CASP7P55210 303 aa20.1■□□□□ 0.81
TVP23B-202ENST00000476139 ZBTB3Q9H5J0 574 aa20.1■□□□□ 0.81
TVP23B-202ENST00000476139 COPRSQ9NQ92 184 aa20.1■□□□□ 0.81
TVP23B-202ENST00000476139 PLEKHG2Q9H7P9 1386 aa20.09■□□□□ 0.81
TVP23B-202ENST00000476139 NKX1-1Q15270 411 aaPredicted RBP20.09■□□□□ 0.81
TVP23B-202ENST00000476139 ADCK5Q3MIX3 580 aa20.09■□□□□ 0.81
TVP23B-202ENST00000476139 RUFY2Q8WXA3 655 aa20.09■□□□□ 0.81
TVP23B-202ENST00000476139 PRPF40BQ6NWY9 871 aaKnown RBP20.09■□□□□ 0.81
TVP23B-202ENST00000476139 LMBR1LQ6UX01 489 aa20.09■□□□□ 0.81
TVP23B-202ENST00000476139 LMBRD1Q9NUN5 540 aa20.09■□□□□ 0.81
TVP23B-202ENST00000476139 PRPF40AO75400 957 aaKnown RBP20.08■□□□□ 0.81
TVP23B-202ENST00000476139 RABL6Q3YEC7 729 aaPredicted RBP20.08■□□□□ 0.81
TVP23B-202ENST00000476139 DTNBO60941 627 aa20.08■□□□□ 0.8
TVP23B-202ENST00000476139 NMIQ13287 307 aaPredicted RBP20.08■□□□□ 0.8
TVP23B-202ENST00000476139 DBNLQ9UJU6 430 aaKnown RBP20.08■□□□□ 0.8
TVP23B-202ENST00000476139 CHMP3Q9Y3E7 222 aa20.08■□□□□ 0.8
TVP23B-202ENST00000476139 TTC14Q96N46 770 aa20.07■□□□□ 0.8
TVP23B-202ENST00000476139 GLI3P10071 1580 aa20.07■□□□□ 0.8
TVP23B-202ENST00000476139 CASTP20810 708 aaKnown RBP20.07■□□□□ 0.8
TVP23B-202ENST00000476139 AK2P54819 239 aa20.07■□□□□ 0.8
TVP23B-202ENST00000476139 FOXD4L6Q3SYB3 417 aaPredicted RBP20.07■□□□□ 0.8
TVP23B-202ENST00000476139 CAVIN1Q6NZI2 390 aaKnown RBP20.07■□□□□ 0.8
TVP23B-202ENST00000476139 FOXD4L3Q6VB84 417 aaPredicted RBP20.07■□□□□ 0.8
TVP23B-202ENST00000476139 KLHL40Q2TBA0 621 aa20.07■□□□□ 0.8
TVP23B-202ENST00000476139 INTS4Q96HW7 963 aaKnown RBP20.07■□□□□ 0.8
TVP23B-202ENST00000476139 CCDC9Q9Y3X0 531 aaKnown RBP20.07■□□□□ 0.8
TVP23B-202ENST00000476139 PTMSP20962 102 aa20.06■□□□□ 0.8
TVP23B-202ENST00000476139 FSD1Q9BTV5 496 aa20.06■□□□□ 0.8
TVP23B-202ENST00000476139 ZNF330Q9Y3S2 320 aaPredicted RBP20.06■□□□□ 0.8
TVP23B-202ENST00000476139 A0A0D9SFI3 127 aa20.06■□□□□ 0.8
TVP23B-202ENST00000476139 CHGBP05060 677 aa20.06■□□□□ 0.8
TVP23B-202ENST00000476139 FOXO4P98177 505 aa20.06■□□□□ 0.8
TVP23B-202ENST00000476139 COL9A3Q14050 684 aaPredicted RBP20.06■□□□□ 0.8
TVP23B-202ENST00000476139 TNNI3KQ59H18 835 aa20.06■□□□□ 0.8
TVP23B-202ENST00000476139 RUFY3Q7L099 469 aa20.06■□□□□ 0.8
TVP23B-202ENST00000476139 FPGT-TNNI3KV9GXZ4 949 aa20.06■□□□□ 0.8
TVP23B-202ENST00000476139 H7C1W4 665 aa20.05■□□□□ 0.8
TVP23B-202ENST00000476139 BRD1O95696 1058 aa20.04■□□□□ 0.8
TVP23B-202ENST00000476139 NECTIN1Q15223 517 aa20.04■□□□□ 0.8
TVP23B-202ENST00000476139 BTG4Q9NY30 223 aa20.04■□□□□ 0.8
TVP23B-202ENST00000476139 RBM27Q9P2N5 1060 aaKnown RBP20.04■□□□□ 0.8
TVP23B-202ENST00000476139 ASAP1Q9ULH1 1129 aa20.04■□□□□ 0.8
TVP23B-202ENST00000476139 JAKMIP1Q96N16 626 aaKnown RBP20.04■□□□□ 0.8
TVP23B-202ENST00000476139 DBNDD2Q9BQY9 259 aa20.04■□□□□ 0.8
TVP23B-202ENST00000476139 CCDC171Q6TFL3 1326 aa20.03■□□□□ 0.8
TVP23B-202ENST00000476139 CWC25Q9NXE8 425 aaPredicted RBP20.03■□□□□ 0.8
TVP23B-202ENST00000476139 RBM8AQ9Y5S9 174 aaKnown RBP20.03■□□□□ 0.8
TVP23B-202ENST00000476139 ZNF589Q86UQ0 364 aaPredicted RBP20.02■□□□□ 0.8
TVP23B-202ENST00000476139 ARFGEF2Q9Y6D5 1785 aa20.02■□□□□ 0.8
TVP23B-202ENST00000476139 KCPQ6ZWJ8 1503 aa20.02■□□□□ 0.8
TVP23B-202ENST00000476139 GPT2Q8TD30 523 aa20.02■□□□□ 0.8
TVP23B-202ENST00000476139 MAP4K1Q92918 833 aa20.02■□□□□ 0.8
TVP23B-202ENST00000476139 TMOD3Q9NYL9 352 aa20.02■□□□□ 0.8
TVP23B-202ENST00000476139 ERBB4Q15303 1308 aa20.02■□□□□ 0.8
TVP23B-202ENST00000476139 LARGE1O95461 756 aa20.01■□□□□ 0.79
TVP23B-202ENST00000476139 KCNJ4P48050 445 aa20.01■□□□□ 0.79
TVP23B-202ENST00000476139 LIMCH1Q9UPQ0 1083 aa20.01■□□□□ 0.79
TVP23B-202ENST00000476139 TAF6LQ9Y6J9 622 aa20.01■□□□□ 0.79
TVP23B-202ENST00000476139 PARP4Q9UKK3 1724 aaKnown RBP20.01■□□□□ 0.79
TVP23B-202ENST00000476139 TPRNQ4KMQ1 711 aa20.01■□□□□ 0.79
TVP23B-202ENST00000476139 PIGBQ92521 554 aa20.01■□□□□ 0.79
TVP23B-202ENST00000476139 ZNF594Q96JF6 807 aaPredicted RBP20.01■□□□□ 0.79
TVP23B-202ENST00000476139 NSFL1CQ9UNZ2 370 aaKnown RBP20.01■□□□□ 0.79
TVP23B-202ENST00000476139 CREB3L3Q68CJ9 461 aa20.01■□□□□ 0.79
TVP23B-202ENST00000476139 DNAJC2Q99543 621 aaKnown RBP20.01■□□□□ 0.79
TVP23B-202ENST00000476139 AFDNP55196 1824 aaKnown RBP20■□□□□ 0.79
TVP23B-202ENST00000476139 ATP5JP18859 108 aa20■□□□□ 0.79
TVP23B-202ENST00000476139 TIMM10P62072 90 aa20■□□□□ 0.79
TVP23B-202ENST00000476139 ATG9AQ7Z3C6 839 aa20■□□□□ 0.79
TVP23B-202ENST00000476139 TRIM44Q96DX7 344 aaPredicted RBP20■□□□□ 0.79
TVP23B-202ENST00000476139 HIP1O00291 1037 aa19.99■□□□□ 0.79
TVP23B-202ENST00000476139 PDRG1Q9NUG6 133 aa19.99■□□□□ 0.79
TVP23B-202ENST00000476139 COL15A1P39059 1388 aa19.99■□□□□ 0.79
TVP23B-202ENST00000476139 KCNB2Q92953 911 aa19.99■□□□□ 0.79
TVP23B-202ENST00000476139 NEUROD6Q96NK8 337 aa19.99■□□□□ 0.79
TVP23B-202ENST00000476139 ZSWIM6Q9HCJ5 1215 aa19.99■□□□□ 0.79
TVP23B-202ENST00000476139 NASPP49321 788 aaPredicted RBP19.98■□□□□ 0.79
TVP23B-202ENST00000476139 LRRC24Q50LG9 513 aa19.98■□□□□ 0.79
TVP23B-202ENST00000476139 DNAJC10Q8IXB1 793 aa19.98■□□□□ 0.79
TVP23B-202ENST00000476139 ZKSCAN1P17029 563 aaPredicted RBP19.98■□□□□ 0.79
TVP23B-202ENST00000476139 CCDC191Q8NCU4 936 aa19.98■□□□□ 0.79
TVP23B-202ENST00000476139 SLC27A2O14975 620 aa19.98■□□□□ 0.79
TVP23B-202ENST00000476139 DDX46Q7L014 1031 aaKnown RBP19.98■□□□□ 0.79
TVP23B-202ENST00000476139 TCEANC2Q96MN5 208 aa19.98■□□□□ 0.79
TVP23B-202ENST00000476139 SEC62Q99442 399 aaKnown RBP19.98■□□□□ 0.79
TVP23B-202ENST00000476139 GDPD2Q9HCC8 539 aa19.98■□□□□ 0.79
TVP23B-202ENST00000476139 CYP46A1Q9Y6A2 500 aa19.98■□□□□ 0.79
TVP23B-202ENST00000476139 ZSCAN23Q3MJ62 389 aa19.97■□□□□ 0.79
TVP23B-202ENST00000476139 SLFNL1Q499Z3 407 aa19.97■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms