RNA–Protein interactions for RNA: ENST00000476034.5

PDE6B-209, Transcript of phosphodiesterase 6B, humanhuman

TSL 1 (best)

Gene PDE6B, Length 1,012 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6B-209ENST00000476034 UTP14AQ9BVJ6 771 aaKnown RBP24.73■■□□□ 1.55
PDE6B-209ENST00000476034 KLRG2A4D1S0 409 aaPredicted RBP24.72■■□□□ 1.55
PDE6B-209ENST00000476034 SLC4A2P04920 1241 aa24.72■■□□□ 1.55
PDE6B-209ENST00000476034 YY1P25490 414 aa24.72■■□□□ 1.55
PDE6B-209ENST00000476034 SLFN5Q08AF3 891 aa24.72■■□□□ 1.55
PDE6B-209ENST00000476034 STYK1Q6J9G0 422 aa24.72■■□□□ 1.55
PDE6B-209ENST00000476034 ZNF622Q969S3 477 aaKnown RBP eCLIP24.72■■□□□ 1.55
PDE6B-209ENST00000476034 MASTLQ96GX5 879 aa24.71■■□□□ 1.55
PDE6B-209ENST00000476034 ISCA1Q9BUE6 129 aa24.71■■□□□ 1.55
PDE6B-209ENST00000476034 CNKSR1Q969H4 720 aa24.69■■□□□ 1.54
PDE6B-209ENST00000476034 NPR1P16066 1061 aa24.68■■□□□ 1.54
PDE6B-209ENST00000476034 TRIM28Q13263 835 aaKnown RBP24.68■■□□□ 1.54
PDE6B-209ENST00000476034 KSR2Q6VAB6 950 aa24.68■■□□□ 1.54
PDE6B-209ENST00000476034 TRMT112Q9UI30 125 aaKnown RBP24.68■■□□□ 1.54
PDE6B-209ENST00000476034 ADCY9O60503 1353 aa24.67■■□□□ 1.54
PDE6B-209ENST00000476034 LAMB2P55268 1798 aa24.67■■□□□ 1.54
PDE6B-209ENST00000476034 ATP5J2-PTCD1G3V325 749 aa24.67■■□□□ 1.54
PDE6B-209ENST00000476034 FLIIQ13045 1269 aa24.67■■□□□ 1.54
PDE6B-209ENST00000476034 CRY2Q49AN0 593 aa24.67■■□□□ 1.54
PDE6B-209ENST00000476034 G2E3Q7L622 706 aa24.67■■□□□ 1.54
PDE6B-209ENST00000476034 CDCA7LQ96GN5 454 aa24.67■■□□□ 1.54
PDE6B-209ENST00000476034 METTL22Q9BUU2 404 aaPredicted RBP24.67■■□□□ 1.54
PDE6B-209ENST00000476034 MAP3K2Q9Y2U5 619 aa24.67■■□□□ 1.54
PDE6B-209ENST00000476034 DDX60Q8IY21 1712 aaKnown RBP24.66■■□□□ 1.54
PDE6B-209ENST00000476034 SH3TC1Q8TE82 1336 aa24.66■■□□□ 1.54
PDE6B-209ENST00000476034 SLX4Q8IY92 1834 aa24.66■■□□□ 1.54
PDE6B-209ENST00000476034 PI4KAP2A4QPH2 592 aa24.66■■□□□ 1.54
PDE6B-209ENST00000476034 SLC10A5Q5PT55 438 aa24.66■■□□□ 1.54
PDE6B-209ENST00000476034 ARHGAP27Q6ZUM4 889 aa24.66■■□□□ 1.54
PDE6B-209ENST00000476034 TRMT2AQ8IZ69 625 aaKnown RBP24.66■■□□□ 1.54
PDE6B-209ENST00000476034 PI4KAP1Q8N8J0 262 aa24.66■■□□□ 1.54
PDE6B-209ENST00000476034 MYD88Q99836 296 aa24.66■■□□□ 1.54
PDE6B-209ENST00000476034 PRPF40BQ6NWY9 871 aaKnown RBP24.64■■□□□ 1.54
PDE6B-209ENST00000476034 HNRNPUQ00839 825 aaKnown RBP eCLIP24.63■■□□□ 1.53
PDE6B-209ENST00000476034 FKBP5Q13451 457 aaPredicted RBP24.63■■□□□ 1.53
PDE6B-209ENST00000476034 CCDC191Q8NCU4 936 aa24.63■■□□□ 1.53
PDE6B-209ENST00000476034 RPGRQ92834 1020 aaKnown RBP24.63■■□□□ 1.53
PDE6B-209ENST00000476034 NLRP3Q96P20 1036 aa24.63■■□□□ 1.53
PDE6B-209ENST00000476034 ALDH1B1P30837 517 aa24.62■■□□□ 1.53
PDE6B-209ENST00000476034 NEXNQ0ZGT2 675 aa24.62■■□□□ 1.53
PDE6B-209ENST00000476034 HOXA10P31260 410 aaPredicted RBP24.61■■□□□ 1.53
PDE6B-209ENST00000476034 ZNF428Q96B54 188 aa24.61■■□□□ 1.53
PDE6B-209ENST00000476034 FER1L6Q2WGJ9 1857 aa24.61■■□□□ 1.53
PDE6B-209ENST00000476034 C21orf2O43822 256 aa24.6■■□□□ 1.53
PDE6B-209ENST00000476034 HCLS1P14317 486 aaPredicted RBP24.6■■□□□ 1.53
PDE6B-209ENST00000476034 C3orf67Q6ZVT6 689 aa24.6■■□□□ 1.53
PDE6B-209ENST00000476034 SYNE4Q8N205 404 aa24.6■■□□□ 1.53
PDE6B-209ENST00000476034 FAM89AQ96GI7 184 aa24.6■■□□□ 1.53
PDE6B-209ENST00000476034 CWC25Q9NXE8 425 aaPredicted RBP24.6■■□□□ 1.53
PDE6B-209ENST00000476034 SBF1O95248 1867 aa24.6■■□□□ 1.53
PDE6B-209ENST00000476034 SOGA3Q5TF21 947 aa24.59■■□□□ 1.53
PDE6B-209ENST00000476034 ZBTB38Q8NAP3 1195 aaPredicted RBP24.59■■□□□ 1.53
PDE6B-209ENST00000476034 DNAAF4Q8WXU2 420 aa24.58■■□□□ 1.53
PDE6B-209ENST00000476034 RBM17Q96I25 401 aaKnown RBP24.58■■□□□ 1.53
PDE6B-209ENST00000476034 PCCAP05165 728 aaPredicted RBP24.57■■□□□ 1.52
PDE6B-209ENST00000476034 IGKV5-2P06315 115 aa24.57■■□□□ 1.52
PDE6B-209ENST00000476034 CT47B1P0C2W7 299 aaPredicted RBP24.57■■□□□ 1.52
PDE6B-209ENST00000476034 CRAMP1Q96RY5 1269 aa24.57■■□□□ 1.52
PDE6B-209ENST00000476034 ZNF219Q9P2Y4 722 aaPredicted RBP24.57■■□□□ 1.52
PDE6B-209ENST00000476034 HSP90B1P14625 803 aaKnown RBP24.56■■□□□ 1.52
PDE6B-209ENST00000476034 NEURL1BA8MQ27 555 aa24.55■■□□□ 1.52
PDE6B-209ENST00000476034 IRS4O14654 1257 aaPredicted RBP24.55■■□□□ 1.52
PDE6B-209ENST00000476034 CWF19L2Q2TBE0 894 aaKnown RBP24.55■■□□□ 1.52
PDE6B-209ENST00000476034 RTL5Q5HYW3 569 aaPredicted RBP24.55■■□□□ 1.52
PDE6B-209ENST00000476034 C7orf43Q8WVR3 580 aa24.55■■□□□ 1.52
PDE6B-209ENST00000476034 CCDC88AQ3V6T2 1871 aa24.54■■□□□ 1.52
PDE6B-209ENST00000476034 NFKBIEO00221 500 aa24.54■■□□□ 1.52
PDE6B-209ENST00000476034 RASSF7Q02833 373 aa24.54■■□□□ 1.52
PDE6B-209ENST00000476034 ALDH1L2Q3SY69 923 aa24.54■■□□□ 1.52
PDE6B-209ENST00000476034 CCDC93Q567U6 631 aa24.54■■□□□ 1.52
PDE6B-209ENST00000476034 MRPL50Q8N5N7 158 aaKnown RBP24.54■■□□□ 1.52
PDE6B-209ENST00000476034 LINS1Q8NG48 757 aa24.53■■□□□ 1.52
PDE6B-209ENST00000476034 SSH1Q8WYL5 1049 aa24.53■■□□□ 1.52
PDE6B-209ENST00000476034 LTBP3Q9NS15 1303 aa24.53■■□□□ 1.52
PDE6B-209ENST00000476034 TIAM2Q8IVF5 1701 aa24.52■■□□□ 1.52
PDE6B-209ENST00000476034 SF3B3Q15393 1217 aaKnown RBP24.52■■□□□ 1.52
PDE6B-209ENST00000476034 C9orf131Q5VYM1 1079 aa24.52■■□□□ 1.52
PDE6B-209ENST00000476034 ZNF784Q8NCA9 323 aaPredicted RBP24.52■■□□□ 1.52
PDE6B-209ENST00000476034 MYH3P11055 1940 aa24.52■■□□□ 1.52
PDE6B-209ENST00000476034 ABCC4O15439 1325 aa24.52■■□□□ 1.52
PDE6B-209ENST00000476034 ZBED9Q6R2W3 1325 aa24.52■■□□□ 1.52
PDE6B-209ENST00000476034 CDHR2Q9BYE9 1310 aa24.52■■□□□ 1.52
PDE6B-209ENST00000476034 F6X3S4 739 aa24.51■■□□□ 1.51
PDE6B-209ENST00000476034 LMNB1P20700 586 aa24.51■■□□□ 1.51
PDE6B-209ENST00000476034 DDX46Q7L014 1031 aaKnown RBP24.51■■□□□ 1.51
PDE6B-209ENST00000476034 TAOK3Q9H2K8 898 aa24.51■■□□□ 1.51
PDE6B-209ENST00000476034 RNF181Q9P0P0 153 aa24.51■■□□□ 1.51
PDE6B-209ENST00000476034 PTPRCP08575 1304 aa24.51■■□□□ 1.51
PDE6B-209ENST00000476034 DICER1Q9UPY3 1922 aaKnown RBP24.51■■□□□ 1.51
PDE6B-209ENST00000476034 TAF1P21675 1872 aa24.5■■□□□ 1.51
PDE6B-209ENST00000476034 PPEF1O14829 653 aaPredicted RBP24.5■■□□□ 1.51
PDE6B-209ENST00000476034 GCKRQ14397 625 aa24.5■■□□□ 1.51
PDE6B-209ENST00000476034 RTKN2Q8IZC4 609 aa24.5■■□□□ 1.51
PDE6B-209ENST00000476034 BEND3Q5T5X7 828 aa24.49■■□□□ 1.51
PDE6B-209ENST00000476034 CC2D2BQ6DHV5 1058 aa24.49■■□□□ 1.51
PDE6B-209ENST00000476034 BCL2L13Q9BXK5 485 aa24.49■■□□□ 1.51
PDE6B-209ENST00000476034 SMC4Q9NTJ3 1288 aa24.49■■□□□ 1.51
PDE6B-209ENST00000476034 SNED1Q8TER0 1413 aa24.49■■□□□ 1.51
PDE6B-209ENST00000476034 PDE8AO60658 829 aa24.48■■□□□ 1.51
PDE6B-209ENST00000476034 GRAPQ13588 217 aa24.48■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms