RNA–Protein interactions for RNA: ENST00000475973.1

UBR4-212, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 3

Gene UBR4, Length 600 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-212ENST00000475973 TATP17735 454 aaPredicted RBP8.47□□□□□ -1.05
UBR4-212ENST00000475973 PDIA6Q15084 440 aa8.47□□□□□ -1.05
UBR4-212ENST00000475973 RABEP1Q15276 862 aa8.47□□□□□ -1.05
UBR4-212ENST00000475973 SLC15A2Q16348 729 aa8.47□□□□□ -1.05
UBR4-212ENST00000475973 KLHL40Q2TBA0 621 aa8.47□□□□□ -1.05
UBR4-212ENST00000475973 TTC22Q5TAA0 569 aa8.47□□□□□ -1.05
UBR4-212ENST00000475973 ZCRB1Q8TBF4 217 aaKnown RBP8.47□□□□□ -1.05
UBR4-212ENST00000475973 SYTL4Q96C24 671 aaPredicted RBP8.47□□□□□ -1.05
UBR4-212ENST00000475973 GBP4Q96PP9 640 aa8.47□□□□□ -1.05
UBR4-212ENST00000475973 PANK2Q9BZ23 570 aa8.47□□□□□ -1.05
UBR4-212ENST00000475973 EMILIN1Q9Y6C2 1016 aa8.47□□□□□ -1.05
UBR4-212ENST00000475973 MEGF6O75095 1541 aa8.47□□□□□ -1.05
UBR4-212ENST00000475973 LTN1O94822 1766 aa8.47□□□□□ -1.05
UBR4-212ENST00000475973 PCDH11XQ9BZA7 1347 aa8.47□□□□□ -1.05
UBR4-212ENST00000475973 PCDH11YQ9BZA8 1340 aa8.47□□□□□ -1.05
UBR4-212ENST00000475973 TUBGCP6Q96RT7 1819 aa8.47□□□□□ -1.05
UBR4-212ENST00000475973 HS1BP3Q53T59 392 aa8.46□□□□□ -1.06
UBR4-212ENST00000475973 SLC27A3Q5K4L6 730 aa8.46□□□□□ -1.06
UBR4-212ENST00000475973 ANKRD45Q5TZF3 282 aa8.46□□□□□ -1.06
UBR4-212ENST00000475973 CEP85Q6P2H3 762 aa8.46□□□□□ -1.06
UBR4-212ENST00000475973 PLPP6Q8IY26 295 aa8.46□□□□□ -1.06
UBR4-212ENST00000475973 GAS2L2Q8NHY3 880 aa8.46□□□□□ -1.06
UBR4-212ENST00000475973 SOS1Q07889 1333 aaPredicted RBP8.46□□□□□ -1.06
UBR4-212ENST00000475973 N4BP2Q86UW6 1770 aaPredicted RBP8.45□□□□□ -1.06
UBR4-212ENST00000475973 C2orf72A6NCS6 295 aa8.45□□□□□ -1.06
UBR4-212ENST00000475973 ZBTB7AO95365 584 aa8.45□□□□□ -1.06
UBR4-212ENST00000475973 BAG4O95429 457 aaKnown RBP8.45□□□□□ -1.06
UBR4-212ENST00000475973 FBLN1P23142 703 aa8.45□□□□□ -1.06
UBR4-212ENST00000475973 HMGB2P26583 209 aaKnown RBP8.45□□□□□ -1.06
UBR4-212ENST00000475973 NBPF6Q5VWK0 638 aa8.45□□□□□ -1.06
UBR4-212ENST00000475973 UBE2Q2Q8WVN8 375 aa8.45□□□□□ -1.06
UBR4-212ENST00000475973 PDLIM2Q96JY6 352 aa8.45□□□□□ -1.06
UBR4-212ENST00000475973 NBPF4Q96M43 638 aa8.45□□□□□ -1.06
UBR4-212ENST00000475973 MTFR1LQ9H019 292 aa8.45□□□□□ -1.06
UBR4-212ENST00000475973 CWC22Q9HCG8 908 aaKnown RBP8.45□□□□□ -1.06
UBR4-212ENST00000475973 TERF1P54274 439 aa8.44□□□□□ -1.06
UBR4-212ENST00000475973 NUCB2P80303 420 aa8.44□□□□□ -1.06
UBR4-212ENST00000475973 CUL4AQ13619 759 aa8.44□□□□□ -1.06
UBR4-212ENST00000475973 HSP90AB2PQ58FF8 381 aa8.44□□□□□ -1.06
UBR4-212ENST00000475973 GPIHBP1Q8IV16 184 aa8.44□□□□□ -1.06
UBR4-212ENST00000475973 USHBP1Q8N6Y0 703 aa8.44□□□□□ -1.06
UBR4-212ENST00000475973 THUMPD2Q9BTF0 503 aaKnown RBP8.44□□□□□ -1.06
UBR4-212ENST00000475973 LMBRD1Q9NUN5 540 aa8.44□□□□□ -1.06
UBR4-212ENST00000475973 ESPNB1AK53 854 aa8.43□□□□□ -1.06
UBR4-212ENST00000475973 G3V3G9 751 aa8.43□□□□□ -1.06
UBR4-212ENST00000475973 HTATSF1O43719 755 aaKnown RBP8.43□□□□□ -1.06
UBR4-212ENST00000475973 PRIM1P49642 420 aaKnown RBP8.43□□□□□ -1.06
UBR4-212ENST00000475973 EIF4A2Q14240 407 aaKnown RBP8.43□□□□□ -1.06
UBR4-212ENST00000475973 BABAM1Q9NWV8 329 aa8.43□□□□□ -1.06
UBR4-212ENST00000475973 ZDHHC9Q9Y397 364 aa8.43□□□□□ -1.06
UBR4-212ENST00000475973 ERBB4Q15303 1308 aa8.43□□□□□ -1.06
UBR4-212ENST00000475973 RGPD5Q99666 1765 aa8.43□□□□□ -1.06
UBR4-212ENST00000475973 HMOX1P09601 288 aa8.42□□□□□ -1.06
UBR4-212ENST00000475973 PLCG2P16885 1265 aa8.42□□□□□ -1.06
UBR4-212ENST00000475973 SDSP20132 328 aa8.42□□□□□ -1.06
UBR4-212ENST00000475973 SSFA2P28290 1259 aa8.42□□□□□ -1.06
UBR4-212ENST00000475973 ZNF827Q17R98 1081 aa8.42□□□□□ -1.06
UBR4-212ENST00000475973 L3MBTL3Q96JM7 780 aaPredicted RBP8.42□□□□□ -1.06
UBR4-212ENST00000475973 STAP2Q9UGK3 403 aa8.42□□□□□ -1.06
UBR4-212ENST00000475973 CCNL1Q9UK58 526 aaPredicted RBP8.42□□□□□ -1.06
UBR4-212ENST00000475973 SPG7Q9UQ90 795 aa8.42□□□□□ -1.06
UBR4-212ENST00000475973 PXDNLA1KZ92 1463 aa8.42□□□□□ -1.06
UBR4-212ENST00000475973 PAPPAQ13219 1627 aa8.42□□□□□ -1.06
UBR4-212ENST00000475973 SBF2Q86WG5 1849 aa8.41□□□□□ -1.06
UBR4-212ENST00000475973 CASZ1Q86V15 1759 aa8.41□□□□□ -1.06
UBR4-212ENST00000475973 PLEKHG2Q9H7P9 1386 aa8.41□□□□□ -1.06
UBR4-212ENST00000475973 HSP90AB1P08238 724 aaKnown RBP8.41□□□□□ -1.06
UBR4-212ENST00000475973 POLD1P28340 1107 aa8.41□□□□□ -1.06
UBR4-212ENST00000475973 ANAPC15P60006 121 aa8.41□□□□□ -1.06
UBR4-212ENST00000475973 CCDC173Q0VFZ6 552 aa8.41□□□□□ -1.06
UBR4-212ENST00000475973 SLC16A10Q8TF71 515 aa8.41□□□□□ -1.06
UBR4-212ENST00000475973 AK7Q96M32 723 aa8.41□□□□□ -1.06
UBR4-212ENST00000475973 C1orf115Q9H7X2 142 aa8.41□□□□□ -1.06
UBR4-212ENST00000475973 LRRC4BQ9NT99 713 aa8.41□□□□□ -1.06
UBR4-212ENST00000475973 TFCP2L1Q9NZI6 479 aa8.41□□□□□ -1.06
UBR4-212ENST00000475973 NCAPD2Q15021 1401 aa8.4□□□□□ -1.06
UBR4-212ENST00000475973 AOX1Q06278 1338 aa8.4□□□□□ -1.06
UBR4-212ENST00000475973 IGSF1Q8N6C5 1336 aa8.4□□□□□ -1.06
UBR4-212ENST00000475973 PTGER2P43116 358 aa8.4□□□□□ -1.06
UBR4-212ENST00000475973 C16orf71Q8IYS4 520 aaPredicted RBP8.4□□□□□ -1.06
UBR4-212ENST00000475973 INTS4Q96HW7 963 aaKnown RBP8.4□□□□□ -1.06
UBR4-212ENST00000475973 PDGFDQ9GZP0 370 aaPredicted RBP8.4□□□□□ -1.06
UBR4-212ENST00000475973 PALLDQ8WX93 1383 aa8.39□□□□□ -1.07
UBR4-212ENST00000475973 ZNF500O60304 480 aaPredicted RBP8.39□□□□□ -1.07
UBR4-212ENST00000475973 GABBR2O75899 941 aa8.39□□□□□ -1.07
UBR4-212ENST00000475973 YY1P25490 414 aa8.39□□□□□ -1.07
UBR4-212ENST00000475973 MCM2P49736 904 aa8.39□□□□□ -1.07
UBR4-212ENST00000475973 CCT4P50991 539 aaKnown RBP8.39□□□□□ -1.07
UBR4-212ENST00000475973 PDE1AP54750 535 aa8.39□□□□□ -1.07
UBR4-212ENST00000475973 MAP3K9P80192 1104 aa8.39□□□□□ -1.07
UBR4-212ENST00000475973 KRI1Q8N9T8 703 aaKnown RBP8.39□□□□□ -1.07
UBR4-212ENST00000475973 OTUD7AQ8TE49 926 aaPredicted RBP8.39□□□□□ -1.07
UBR4-212ENST00000475973 SMARCC1Q92922 1105 aaPredicted RBP8.39□□□□□ -1.07
UBR4-212ENST00000475973 ARXQ96QS3 562 aa8.39□□□□□ -1.07
UBR4-212ENST00000475973 FHDC1Q9C0D6 1143 aaPredicted RBP8.39□□□□□ -1.07
UBR4-212ENST00000475973 DOT1LQ8TEK3 1739 aa8.39□□□□□ -1.07
UBR4-212ENST00000475973 BTAF1O14981 1849 aa8.38□□□□□ -1.07
UBR4-212ENST00000475973 MAP3K5Q99683 1374 aa8.38□□□□□ -1.07
UBR4-212ENST00000475973 PNPLA7Q6ZV29 1317 aa8.38□□□□□ -1.07
UBR4-212ENST00000475973 CYP27B1O15528 508 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms