RNA–Protein interactions for RNA: ENST00000475903.5

TSC1-205, Transcript of TSC complex subunit 1, humanhuman

TSL 4

Gene TSC1, Length 820 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC1-205ENST00000475903 RIC3Q7Z5B4 369 aa18.7■□□□□ 0.58
TSC1-205ENST00000475903 SYNE4Q8N205 404 aa18.7■□□□□ 0.58
TSC1-205ENST00000475903 C7orf43Q8WVR3 580 aa18.7■□□□□ 0.58
TSC1-205ENST00000475903 CHMP4AQ9BY43 222 aa18.7■□□□□ 0.58
TSC1-205ENST00000475903 TRMT112Q9UI30 125 aaKnown RBP18.7■□□□□ 0.58
TSC1-205ENST00000475903 LMNB1P20700 586 aa18.69■□□□□ 0.58
TSC1-205ENST00000475903 TWISTNBQ3B726 338 aaPredicted RBP18.69■□□□□ 0.58
TSC1-205ENST00000475903 SPINK5Q9NQ38 1064 aaPredicted RBP18.69■□□□□ 0.58
TSC1-205ENST00000475903 ARFGEF1Q9Y6D6 1849 aa18.69■□□□□ 0.58
TSC1-205ENST00000475903 IBTKQ9P2D0 1353 aaPredicted RBP18.68■□□□□ 0.58
TSC1-205ENST00000475903 HCLS1P14317 486 aaPredicted RBP18.68■□□□□ 0.58
TSC1-205ENST00000475903 GOLGA2Q08379 1002 aa18.68■□□□□ 0.58
TSC1-205ENST00000475903 OLFM4Q6UX06 510 aa18.68■□□□□ 0.58
TSC1-205ENST00000475903 RPGRQ92834 1020 aaKnown RBP18.68■□□□□ 0.58
TSC1-205ENST00000475903 NLRP3Q96P20 1036 aa18.68■□□□□ 0.58
TSC1-205ENST00000475903 FANCIQ9NVI1 1328 aa18.68■□□□□ 0.58
TSC1-205ENST00000475903 C1QTNF8P60827 252 aa18.67■□□□□ 0.58
TSC1-205ENST00000475903 ISCA1Q9BUE6 129 aa18.67■□□□□ 0.58
TSC1-205ENST00000475903 HOXA10P31260 410 aaPredicted RBP18.66■□□□□ 0.58
TSC1-205ENST00000475903 SOGA3Q5TF21 947 aa18.66■□□□□ 0.58
TSC1-205ENST00000475903 RBM17Q96I25 401 aaKnown RBP18.66■□□□□ 0.58
TSC1-205ENST00000475903 STK31Q9BXU1 1019 aa18.66■□□□□ 0.58
TSC1-205ENST00000475903 SH3TC1Q8TE82 1336 aa18.66■□□□□ 0.58
TSC1-205ENST00000475903 SLX4Q8IY92 1834 aa18.65■□□□□ 0.58
TSC1-205ENST00000475903 SLC4A2P04920 1241 aa18.65■□□□□ 0.58
TSC1-205ENST00000475903 EXOSC9Q06265 439 aaKnown RBP18.65■□□□□ 0.58
TSC1-205ENST00000475903 FAM89AQ96GI7 184 aa18.65■□□□□ 0.58
TSC1-205ENST00000475903 TAOK3Q9H2K8 898 aa18.65■□□□□ 0.58
TSC1-205ENST00000475903 COL11A2P13942 1736 aaPredicted RBP18.65■□□□□ 0.58
TSC1-205ENST00000475903 DLEC1Q9Y238 1755 aa18.65■□□□□ 0.58
TSC1-205ENST00000475903 VAMP4O75379 141 aa18.64■□□□□ 0.57
TSC1-205ENST00000475903 DDX58O95786 925 aaKnown RBP18.64■□□□□ 0.57
TSC1-205ENST00000475903 TRIM28Q13263 835 aaKnown RBP18.64■□□□□ 0.57
TSC1-205ENST00000475903 CCDC93Q567U6 631 aa18.64■□□□□ 0.57
TSC1-205ENST00000475903 RTL5Q5HYW3 569 aaPredicted RBP18.64■□□□□ 0.57
TSC1-205ENST00000475903 CRAMP1Q96RY5 1269 aa18.64■□□□□ 0.57
TSC1-205ENST00000475903 MYD88Q99836 296 aa18.64■□□□□ 0.57
TSC1-205ENST00000475903 RNF123Q5XPI4 1314 aa18.64■□□□□ 0.57
TSC1-205ENST00000475903 G2E3Q7L622 706 aa18.63■□□□□ 0.57
TSC1-205ENST00000475903 MYH16Q9H6N6 1097 aa18.63■□□□□ 0.57
TSC1-205ENST00000475903 NMRK2Q9NPI5 230 aa18.63■□□□□ 0.57
TSC1-205ENST00000475903 PI4KAP2A4QPH2 592 aa18.62■□□□□ 0.57
TSC1-205ENST00000475903 CCER2I3L3R5 266 aa18.62■□□□□ 0.57
TSC1-205ENST00000475903 KIF3CO14782 793 aa18.62■□□□□ 0.57
TSC1-205ENST00000475903 KSR2Q6VAB6 950 aa18.62■□□□□ 0.57
TSC1-205ENST00000475903 RTKN2Q8IZC4 609 aa18.62■□□□□ 0.57
TSC1-205ENST00000475903 PI4KAP1Q8N8J0 262 aa18.62■□□□□ 0.57
TSC1-205ENST00000475903 MAP3K2Q9Y2U5 619 aa18.62■□□□□ 0.57
TSC1-205ENST00000475903 LTBP3Q9NS15 1303 aa18.62■□□□□ 0.57
TSC1-205ENST00000475903 RIC1Q4ADV7 1423 aa18.62■□□□□ 0.57
TSC1-205ENST00000475903 METTL22Q9BUU2 404 aaPredicted RBP18.61■□□□□ 0.57
TSC1-205ENST00000475903 KDM2BQ8NHM5 1336 aa18.6■□□□□ 0.57
TSC1-205ENST00000475903 ZNF521Q96K83 1311 aa18.6■□□□□ 0.57
TSC1-205ENST00000475903 FKBP4Q02790 459 aaKnown RBP eCLIP18.6■□□□□ 0.57
TSC1-205ENST00000475903 SLC51AQ86UW1 340 aa18.6■□□□□ 0.57
TSC1-205ENST00000475903 RRAGCQ9HB90 399 aa18.6■□□□□ 0.57
TSC1-205ENST00000475903 ZNF277Q9NRM2 450 aaPredicted RBP18.6■□□□□ 0.57
TSC1-205ENST00000475903 GLTPD2A6NH11 291 aa18.59■□□□□ 0.57
TSC1-205ENST00000475903 PPEF1O14829 653 aaPredicted RBP18.59■□□□□ 0.57
TSC1-205ENST00000475903 ZBTB38Q8NAP3 1195 aaPredicted RBP18.59■□□□□ 0.57
TSC1-205ENST00000475903 JARID2Q92833 1246 aaPredicted RBP18.59■□□□□ 0.57
TSC1-205ENST00000475903 TNRC6CQ9HCJ0 1690 aaKnown RBP18.59■□□□□ 0.57
TSC1-205ENST00000475903 SBF1O95248 1867 aa18.58■□□□□ 0.57
TSC1-205ENST00000475903 ABCC4O15439 1325 aa18.58■□□□□ 0.57
TSC1-205ENST00000475903 ZC3H4Q9UPT8 1303 aaKnown RBP18.58■□□□□ 0.57
TSC1-205ENST00000475903 IRS4O14654 1257 aaPredicted RBP18.58■□□□□ 0.56
TSC1-205ENST00000475903 BBOX1O75936 387 aa18.58■□□□□ 0.56
TSC1-205ENST00000475903 CC2D2BQ6DHV5 1058 aa18.58■□□□□ 0.56
TSC1-205ENST00000475903 DDX46Q7L014 1031 aaKnown RBP18.58■□□□□ 0.56
TSC1-205ENST00000475903 CCDC191Q8NCU4 936 aa18.58■□□□□ 0.56
TSC1-205ENST00000475903 FLIIQ13045 1269 aa18.57■□□□□ 0.56
TSC1-205ENST00000475903 DIEXFQ68CQ4 756 aaKnown RBP18.57■□□□□ 0.56
TSC1-205ENST00000475903 DPY19L2Q6NUT2 758 aa18.57■□□□□ 0.56
TSC1-205ENST00000475903 CWC25Q9NXE8 425 aaPredicted RBP18.57■□□□□ 0.56
TSC1-205ENST00000475903 IGKV5-2P06315 115 aa18.56■□□□□ 0.56
TSC1-205ENST00000475903 SF3B3Q15393 1217 aaKnown RBP18.56■□□□□ 0.56
TSC1-205ENST00000475903 TMX4Q9H1E5 349 aaPredicted RBP18.56■□□□□ 0.56
TSC1-205ENST00000475903 ATP6V0A2Q9Y487 856 aa18.56■□□□□ 0.56
TSC1-205ENST00000475903 PCCAP05165 728 aaPredicted RBP18.55■□□□□ 0.56
TSC1-205ENST00000475903 NEXNQ0ZGT2 675 aa18.55■□□□□ 0.56
TSC1-205ENST00000475903 FKBP5Q13451 457 aaPredicted RBP18.55■□□□□ 0.56
TSC1-205ENST00000475903 MIER1Q8N108 512 aa18.55■□□□□ 0.56
TSC1-205ENST00000475903 PSMD1Q99460 953 aa18.55■□□□□ 0.56
TSC1-205ENST00000475903 TOMM70O94826 608 aa18.54■□□□□ 0.56
TSC1-205ENST00000475903 IARSP41252 1262 aaKnown RBP18.54■□□□□ 0.56
TSC1-205ENST00000475903 GRAPQ13588 217 aa18.54■□□□□ 0.56
TSC1-205ENST00000475903 CWF19L2Q2TBE0 894 aaKnown RBP18.54■□□□□ 0.56
TSC1-205ENST00000475903 GRIPAP1Q4V328 841 aa18.54■□□□□ 0.56
TSC1-205ENST00000475903 GRAPLQ8TC17 118 aaPredicted RBP18.54■□□□□ 0.56
TSC1-205ENST00000475903 FER1L6Q2WGJ9 1857 aa18.54■□□□□ 0.56
TSC1-205ENST00000475903 DDNO94850 711 aaPredicted RBP18.53■□□□□ 0.56
TSC1-205ENST00000475903 CACNA1SQ13698 1873 aa18.53■□□□□ 0.56
TSC1-205ENST00000475903 SP8Q8IXZ3 490 aa18.53■□□□□ 0.56
TSC1-205ENST00000475903 C16orf71Q8IYS4 520 aaPredicted RBP18.53■□□□□ 0.56
TSC1-205ENST00000475903 CDCA7LQ96GN5 454 aa18.53■□□□□ 0.56
TSC1-205ENST00000475903 NEURL1BA8MQ27 555 aa18.52■□□□□ 0.56
TSC1-205ENST00000475903 E9PSI1 815 aa18.52■□□□□ 0.56
TSC1-205ENST00000475903 HSP90B1P14625 803 aaKnown RBP18.52■□□□□ 0.56
TSC1-205ENST00000475903 VEGFAP15692 232 aaPredicted RBP18.52■□□□□ 0.56
TSC1-205ENST00000475903 SLFN5Q08AF3 891 aa18.52■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms