RNA–Protein interactions for RNA: ENST00000475558.5

SHQ1-207, Transcript of SHQ1, H/ACA ribonucleoprotein assembly factor, humanhuman

TSL 5

Gene SHQ1, Length 666 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHQ1-207ENST00000475558 MYH14Q7Z406 1995 aaKnown RBP8.95□□□□□ -0.98
SHQ1-207ENST00000475558 COL5A3P25940 1745 aaPredicted RBP8.95□□□□□ -0.98
SHQ1-207ENST00000475558 PTCD1O75127 700 aaKnown RBP8.95□□□□□ -0.98
SHQ1-207ENST00000475558 CRKLP46109 303 aaKnown RBP8.95□□□□□ -0.98
SHQ1-207ENST00000475558 RRP1P56182 461 aaKnown RBP8.95□□□□□ -0.98
SHQ1-207ENST00000475558 TWISTNBQ3B726 338 aaPredicted RBP8.95□□□□□ -0.98
SHQ1-207ENST00000475558 CCDC30Q5VVM6 783 aa8.95□□□□□ -0.98
SHQ1-207ENST00000475558 TNS4Q8IZW8 715 aa8.95□□□□□ -0.98
SHQ1-207ENST00000475558 EIF2AK3Q9NZJ5 1116 aaKnown RBP8.95□□□□□ -0.98
SHQ1-207ENST00000475558 ZC3H4Q9UPT8 1303 aaKnown RBP8.95□□□□□ -0.98
SHQ1-207ENST00000475558 CEMIPQ8WUJ3 1361 aa8.95□□□□□ -0.98
SHQ1-207ENST00000475558 KCPQ6ZWJ8 1503 aa8.95□□□□□ -0.98
SHQ1-207ENST00000475558 SBF1O95248 1867 aa8.94□□□□□ -0.98
SHQ1-207ENST00000475558 CANXP27824 592 aaKnown RBP8.94□□□□□ -0.98
SHQ1-207ENST00000475558 DCTN1Q14203 1278 aa8.94□□□□□ -0.98
SHQ1-207ENST00000475558 TEX13AQ9BXU3 409 aaPredicted RBP8.94□□□□□ -0.98
SHQ1-207ENST00000475558 SLC52A2Q9HAB3 445 aa8.94□□□□□ -0.98
SHQ1-207ENST00000475558 SRP68Q9UHB9 627 aaKnown RBP8.94□□□□□ -0.98
SHQ1-207ENST00000475558 KIF16BQ96L93 1317 aa8.94□□□□□ -0.98
SHQ1-207ENST00000475558 USP42Q9H9J4 1324 aaKnown RBP8.94□□□□□ -0.98
SHQ1-207ENST00000475558 SNPHO15079 494 aa8.93□□□□□ -0.98
SHQ1-207ENST00000475558 ZPR1O75312 459 aa8.93□□□□□ -0.98
SHQ1-207ENST00000475558 VEGFAP15692 232 aaPredicted RBP8.93□□□□□ -0.98
SHQ1-207ENST00000475558 TM4SF1P30408 202 aa8.93□□□□□ -0.98
SHQ1-207ENST00000475558 CHRNA5P30532 468 aa8.93□□□□□ -0.98
SHQ1-207ENST00000475558 PRELPP51888 382 aa8.93□□□□□ -0.98
SHQ1-207ENST00000475558 DDR1Q08345 913 aa8.93□□□□□ -0.98
SHQ1-207ENST00000475558 ZKSCAN2Q63HK3 967 aa8.93□□□□□ -0.98
SHQ1-207ENST00000475558 TTC5Q8N0Z6 440 aa8.93□□□□□ -0.98
SHQ1-207ENST00000475558 NFATC2IPQ8NCF5 419 aa8.93□□□□□ -0.98
SHQ1-207ENST00000475558 STK31Q9BXU1 1019 aa8.93□□□□□ -0.98
SHQ1-207ENST00000475558 API5Q9BZZ5 524 aaKnown RBP8.93□□□□□ -0.98
SHQ1-207ENST00000475558 LGR6Q9HBX8 967 aa8.93□□□□□ -0.98
SHQ1-207ENST00000475558 TNRC6CQ9HCJ0 1690 aaKnown RBP8.93□□□□□ -0.98
SHQ1-207ENST00000475558 KDM6AO15550 1401 aaPredicted RBP8.92□□□□□ -0.98
SHQ1-207ENST00000475558 GLTPD2A6NH11 291 aa8.92□□□□□ -0.98
SHQ1-207ENST00000475558 POLRMTO00411 1230 aaKnown RBP8.92□□□□□ -0.98
SHQ1-207ENST00000475558 LMNB1P20700 586 aa8.92□□□□□ -0.98
SHQ1-207ENST00000475558 INTS5Q6P9B9 1019 aaKnown RBP8.92□□□□□ -0.98
SHQ1-207ENST00000475558 TSR2Q969E8 191 aaKnown RBP8.92□□□□□ -0.98
SHQ1-207ENST00000475558 THUMPD2Q9BTF0 503 aaKnown RBP8.92□□□□□ -0.98
SHQ1-207ENST00000475558 SMC4Q9NTJ3 1288 aa8.92□□□□□ -0.98
SHQ1-207ENST00000475558 PPP4R2Q9NY27 417 aa8.92□□□□□ -0.98
SHQ1-207ENST00000475558 PTPRCP08575 1304 aa8.91□□□□□ -0.98
SHQ1-207ENST00000475558 EIF4A1P60842 406 aaKnown RBP8.91□□□□□ -0.98
SHQ1-207ENST00000475558 ZNF790Q6PG37 636 aa8.91□□□□□ -0.98
SHQ1-207ENST00000475558 C8orf58Q8NAV2 365 aa8.91□□□□□ -0.98
SHQ1-207ENST00000475558 FMNL2Q96PY5 1086 aa8.91□□□□□ -0.98
SHQ1-207ENST00000475558 HDAC5Q9UQL6 1122 aa8.91□□□□□ -0.98
SHQ1-207ENST00000475558 SNRPA1P09661 255 aaKnown RBP8.9□□□□□ -0.98
SHQ1-207ENST00000475558 HSPA1AP0DMV8 641 aaKnown RBP8.9□□□□□ -0.98
SHQ1-207ENST00000475558 HSPA1BP0DMV9 641 aaKnown RBP8.9□□□□□ -0.98
SHQ1-207ENST00000475558 RASSF7Q02833 373 aa8.9□□□□□ -0.98
SHQ1-207ENST00000475558 USPL1Q5W0Q7 1092 aa8.9□□□□□ -0.98
SHQ1-207ENST00000475558 ATF7IPQ6VMQ6 1270 aa8.9□□□□□ -0.98
SHQ1-207ENST00000475558 VSIG10Q8N0Z9 540 aa8.9□□□□□ -0.98
SHQ1-207ENST00000475558 TTLL6Q8N841 843 aa8.9□□□□□ -0.98
SHQ1-207ENST00000475558 SSH1Q8WYL5 1049 aa8.9□□□□□ -0.98
SHQ1-207ENST00000475558 TMEM121BQ9BXQ6 578 aaPredicted RBP8.9□□□□□ -0.98
SHQ1-207ENST00000475558 PCNTO95613 3336 aa8.89□□□□□ -0.99
SHQ1-207ENST00000475558 BCAR3O75815 825 aa8.89□□□□□ -0.99
SHQ1-207ENST00000475558 SERPINB2P05120 415 aa8.89□□□□□ -0.99
SHQ1-207ENST00000475558 MKRN3Q13064 507 aaKnown RBP8.89□□□□□ -0.99
SHQ1-207ENST00000475558 GSE1Q14687 1217 aa8.89□□□□□ -0.99
SHQ1-207ENST00000475558 NFIXQ14938 502 aa8.89□□□□□ -0.99
SHQ1-207ENST00000475558 DPY19L2Q6NUT2 758 aa8.89□□□□□ -0.99
SHQ1-207ENST00000475558 ZNF467Q7Z7K2 595 aaPredicted RBP8.89□□□□□ -0.99
SHQ1-207ENST00000475558 FTSJ3Q8IY81 847 aaKnown RBP8.89□□□□□ -0.99
SHQ1-207ENST00000475558 DZIP1LQ8IYY4 767 aaKnown RBP8.89□□□□□ -0.99
SHQ1-207ENST00000475558 MRPL50Q8N5N7 158 aaKnown RBP8.89□□□□□ -0.99
SHQ1-207ENST00000475558 DBF4Q9UBU7 674 aaPredicted RBP8.89□□□□□ -0.99
SHQ1-207ENST00000475558 NARFQ9UHQ1 456 aa8.89□□□□□ -0.99
SHQ1-207ENST00000475558 DDX19BQ9UMR2 479 aa8.89□□□□□ -0.99
SHQ1-207ENST00000475558 H0YIN7 160 aa8.88□□□□□ -0.99
SHQ1-207ENST00000475558 ELL2O00472 640 aaPredicted RBP8.88□□□□□ -0.99
SHQ1-207ENST00000475558 CYP19A1P11511 503 aaPredicted RBP8.88□□□□□ -0.99
SHQ1-207ENST00000475558 C3orf67Q6ZVT6 689 aa8.88□□□□□ -0.99
SHQ1-207ENST00000475558 C2CD5Q86YS7 1000 aa8.88□□□□□ -0.99
SHQ1-207ENST00000475558 DNAJC10Q8IXB1 793 aa8.88□□□□□ -0.99
SHQ1-207ENST00000475558 FRAT1Q92837 279 aaPredicted RBP8.88□□□□□ -0.99
SHQ1-207ENST00000475558 HYPKQ9NX55 129 aa8.88□□□□□ -0.99
SHQ1-207ENST00000475558 MIS18AQ9NYP9 233 aa8.88□□□□□ -0.99
SHQ1-207ENST00000475558 NOB1Q9ULX3 412 aaKnown RBP8.88□□□□□ -0.99
SHQ1-207ENST00000475558 TJP1Q07157 1748 aa8.88□□□□□ -0.99
SHQ1-207ENST00000475558 CCDC88AQ3V6T2 1871 aa8.87□□□□□ -0.99
SHQ1-207ENST00000475558 ERBB4Q15303 1308 aa8.87□□□□□ -0.99
SHQ1-207ENST00000475558 STARD3NLO95772 234 aa8.87□□□□□ -0.99
SHQ1-207ENST00000475558 DDX58O95786 925 aaKnown RBP8.87□□□□□ -0.99
SHQ1-207ENST00000475558 HDGFL1Q5TGJ6 251 aa8.87□□□□□ -0.99
SHQ1-207ENST00000475558 TSPYL6Q8N831 410 aa8.87□□□□□ -0.99
SHQ1-207ENST00000475558 PDZRN3Q9UPQ7 1066 aa8.87□□□□□ -0.99
SHQ1-207ENST00000475558 ADAMTS7Q9UKP4 1686 aa8.87□□□□□ -0.99
SHQ1-207ENST00000475558 AFDNP55196 1824 aaKnown RBP8.87□□□□□ -0.99
SHQ1-207ENST00000475558 HEG1Q9ULI3 1381 aa8.86□□□□□ -0.99
SHQ1-207ENST00000475558 SCN11AQ9UI33 1791 aa8.86□□□□□ -0.99
SHQ1-207ENST00000475558 NFKBIEO00221 500 aa8.86□□□□□ -0.99
SHQ1-207ENST00000475558 MARVELD3Q96A59 401 aa8.86□□□□□ -0.99
SHQ1-207ENST00000475558 COL15A1P39059 1388 aa8.86□□□□□ -0.99
SHQ1-207ENST00000475558 NRXN2Q9P2S2 1712 aa8.85□□□□□ -0.99
SHQ1-207ENST00000475558 A0A087WZG4 1122 aa8.85□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms