RNA–Protein interactions for RNA: ENST00000475491.1

KCNIP3-206, Transcript of potassium voltage-gated channel interacting protein 3, humanhuman

TSL 1 (best)

Gene KCNIP3, Length 3,658 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP3-206ENST00000475491 GTF2E1P29083 439 aaPredicted RBP13.91□□□□□ -0.18
KCNIP3-206ENST00000475491 LRP10Q7Z4F1 713 aa13.91□□□□□ -0.18
KCNIP3-206ENST00000475491 KIF1BPQ96EK5 621 aa13.91□□□□□ -0.18
KCNIP3-206ENST00000475491 BCL11BQ9C0K0 894 aaPredicted RBP13.91□□□□□ -0.18
KCNIP3-206ENST00000475491 RRP9O43818 475 aaKnown RBP13.91□□□□□ -0.18
KCNIP3-206ENST00000475491 FGD1P98174 961 aa13.91□□□□□ -0.18
KCNIP3-206ENST00000475491 IQSEC3Q9UPP2 1182 aaPredicted RBP13.91□□□□□ -0.18
KCNIP3-206ENST00000475491 CRKLP46109 303 aaKnown RBP13.9□□□□□ -0.18
KCNIP3-206ENST00000475491 SRP68Q9UHB9 627 aaKnown RBP13.9□□□□□ -0.18
KCNIP3-206ENST00000475491 AFF2P51816 1311 aa13.9□□□□□ -0.18
KCNIP3-206ENST00000475491 ALDH1L1O75891 902 aa13.89□□□□□ -0.19
KCNIP3-206ENST00000475491 DDX46Q7L014 1031 aaKnown RBP13.89□□□□□ -0.19
KCNIP3-206ENST00000475491 DBNDD2Q9BQY9 259 aa13.89□□□□□ -0.19
KCNIP3-206ENST00000475491 WWC3Q9ULE0 1092 aa13.89□□□□□ -0.19
KCNIP3-206ENST00000475491 TCEANC2Q96MN5 208 aa13.89□□□□□ -0.19
KCNIP3-206ENST00000475491 COL18A1P39060 1754 aa13.89□□□□□ -0.19
KCNIP3-206ENST00000475491 IBTKQ9P2D0 1353 aaPredicted RBP13.88□□□□□ -0.19
KCNIP3-206ENST00000475491 PPFIA3O75145 1194 aa13.88□□□□□ -0.19
KCNIP3-206ENST00000475491 CYP19A1P11511 503 aaPredicted RBP13.88□□□□□ -0.19
KCNIP3-206ENST00000475491 KCNJ4P48050 445 aa13.88□□□□□ -0.19
KCNIP3-206ENST00000475491 GORABQ5T7V8 394 aa13.88□□□□□ -0.19
KCNIP3-206ENST00000475491 SLC51AQ86UW1 340 aa13.88□□□□□ -0.19
KCNIP3-206ENST00000475491 NCAPD2Q15021 1401 aa13.88□□□□□ -0.19
KCNIP3-206ENST00000475491 PI16Q6UXB8 463 aa13.88□□□□□ -0.19
KCNIP3-206ENST00000475491 CHAMP1Q96JM3 812 aa13.88□□□□□ -0.19
KCNIP3-206ENST00000475491 SPATA31A5Q5VU36 1347 aa13.88□□□□□ -0.19
KCNIP3-206ENST00000475491 SPATA31A7Q8IWB4 1347 aa13.88□□□□□ -0.19
KCNIP3-206ENST00000475491 FKBP4Q02790 459 aaKnown RBP eCLIP13.88□□□□□ -0.19
KCNIP3-206ENST00000475491 CASC1Q6TDU7 716 aa13.88□□□□□ -0.19
KCNIP3-206ENST00000475491 WTIPA6NIX2 430 aaPredicted RBP13.87□□□□□ -0.19
KCNIP3-206ENST00000475491 STK11IPQ8N1F8 1099 aa13.87□□□□□ -0.19
KCNIP3-206ENST00000475491 QTRT2Q9H974 415 aaKnown RBP13.87□□□□□ -0.19
KCNIP3-206ENST00000475491 PALD1Q9ULE6 856 aa13.87□□□□□ -0.19
KCNIP3-206ENST00000475491 FAM227BQ96M60 508 aa13.87□□□□□ -0.19
KCNIP3-206ENST00000475491 CHMP4AQ9BY43 222 aa13.87□□□□□ -0.19
KCNIP3-206ENST00000475491 NIP7Q9Y221 180 aaKnown RBP eCLIP13.87□□□□□ -0.19
KCNIP3-206ENST00000475491 TAF5LO75529 589 aa13.87□□□□□ -0.19
KCNIP3-206ENST00000475491 NKX1-1Q15270 411 aaPredicted RBP13.87□□□□□ -0.19
KCNIP3-206ENST00000475491 CCDC129Q6ZRS4 1044 aa13.87□□□□□ -0.19
KCNIP3-206ENST00000475491 FSD1Q9BTV5 496 aa13.87□□□□□ -0.19
KCNIP3-206ENST00000475491 TRIM37O94972 964 aa13.86□□□□□ -0.19
KCNIP3-206ENST00000475491 PTPN12Q05209 780 aaKnown RBP13.86□□□□□ -0.19
KCNIP3-206ENST00000475491 CCDC57Q2TAC2 916 aa13.86□□□□□ -0.19
KCNIP3-206ENST00000475491 AMIGO3Q86WK7 504 aa13.86□□□□□ -0.19
KCNIP3-206ENST00000475491 JAG2Q9Y219 1238 aa13.86□□□□□ -0.19
KCNIP3-206ENST00000475491 POLA2Q14181 598 aa13.86□□□□□ -0.19
KCNIP3-206ENST00000475491 SEC62Q99442 399 aaKnown RBP13.86□□□□□ -0.19
KCNIP3-206ENST00000475491 GREM2Q9H772 168 aa13.86□□□□□ -0.19
KCNIP3-206ENST00000475491 SEC31BQ9NQW1 1179 aa13.86□□□□□ -0.19
KCNIP3-206ENST00000475491 GNPATO15228 680 aa13.86□□□□□ -0.19
KCNIP3-206ENST00000475491 DIAPH3Q9NSV4 1193 aa13.86□□□□□ -0.19
KCNIP3-206ENST00000475491 SEPT12Q8IYM1 358 aa13.85□□□□□ -0.19
KCNIP3-206ENST00000475491 FAM208AQ9UK61 1670 aaKnown RBP13.85□□□□□ -0.19
KCNIP3-206ENST00000475491 NCLP19338 710 aaKnown RBP13.85□□□□□ -0.19
KCNIP3-206ENST00000475491 TCIRG1Q13488 830 aa13.85□□□□□ -0.19
KCNIP3-206ENST00000475491 CNNM1Q9NRU3 951 aa13.85□□□□□ -0.19
KCNIP3-206ENST00000475491 ADORA1P30542 326 aa13.85□□□□□ -0.19
KCNIP3-206ENST00000475491 IRS4O14654 1257 aaPredicted RBP13.84□□□□□ -0.19
KCNIP3-206ENST00000475491 NEK4P51957 841 aa13.84□□□□□ -0.19
KCNIP3-206ENST00000475491 PALLDQ8WX93 1383 aa13.84□□□□□ -0.19
KCNIP3-206ENST00000475491 GOLIM4O00461 696 aa13.84□□□□□ -0.19
KCNIP3-206ENST00000475491 CHMLP26374 656 aa13.84□□□□□ -0.19
KCNIP3-206ENST00000475491 DBNLQ9UJU6 430 aaKnown RBP13.84□□□□□ -0.19
KCNIP3-206ENST00000475491 LTBP4Q8N2S1 1624 aa13.83□□□□□ -0.19
KCNIP3-206ENST00000475491 LDHAL6AQ6ZMR3 332 aa13.83□□□□□ -0.2
KCNIP3-206ENST00000475491 LINC00116Q8NCU8 138 aa13.83□□□□□ -0.2
KCNIP3-206ENST00000475491 ECHDC1Q9NTX5 307 aa13.83□□□□□ -0.2
KCNIP3-206ENST00000475491 CCDC87Q9NVE4 849 aa13.83□□□□□ -0.2
KCNIP3-206ENST00000475491 ERC2O15083 957 aa13.83□□□□□ -0.2
KCNIP3-206ENST00000475491 FOXO4P98177 505 aa13.83□□□□□ -0.2
KCNIP3-206ENST00000475491 COL9A3Q14050 684 aaPredicted RBP13.83□□□□□ -0.2
KCNIP3-206ENST00000475491 SUSD4Q5VX71 490 aa13.83□□□□□ -0.2
KCNIP3-206ENST00000475491 PI4K2BQ8TCG2 481 aa13.83□□□□□ -0.2
KCNIP3-206ENST00000475491 CCNL1Q9UK58 526 aaPredicted RBP13.83□□□□□ -0.2
KCNIP3-206ENST00000475491 ANTXR1Q9H6X2 564 aa13.82□□□□□ -0.2
KCNIP3-206ENST00000475491 KIF2CQ99661 725 aa13.82□□□□□ -0.2
KCNIP3-206ENST00000475491 ITGA6P23229 1130 aa13.82□□□□□ -0.2
KCNIP3-206ENST00000475491 IFIT5Q13325 482 aaKnown RBP13.82□□□□□ -0.2
KCNIP3-206ENST00000475491 METTL24Q5JXM2 366 aa13.82□□□□□ -0.2
KCNIP3-206ENST00000475491 NLRP10Q86W26 655 aa13.82□□□□□ -0.2
KCNIP3-206ENST00000475491 USP26Q9BXU7 913 aa13.82□□□□□ -0.2
KCNIP3-206ENST00000475491 NAP1L2Q9ULW6 460 aaPredicted RBP13.82□□□□□ -0.2
KCNIP3-206ENST00000475491 USPL1Q5W0Q7 1092 aa13.81□□□□□ -0.2
KCNIP3-206ENST00000475491 INTS5Q6P9B9 1019 aaKnown RBP13.81□□□□□ -0.2
KCNIP3-206ENST00000475491 GJD4Q96KN9 370 aaPredicted RBP13.81□□□□□ -0.2
KCNIP3-206ENST00000475491 ARID3AQ99856 593 aa13.81□□□□□ -0.2
KCNIP3-206ENST00000475491 ESYT1Q9BSJ8 1104 aa13.81□□□□□ -0.2
KCNIP3-206ENST00000475491 PHLPP1O60346 1717 aa13.81□□□□□ -0.2
KCNIP3-206ENST00000475491 UBN2Q6ZU65 1347 aa13.81□□□□□ -0.2
KCNIP3-206ENST00000475491 RAB11FIP3O75154 756 aa13.81□□□□□ -0.2
KCNIP3-206ENST00000475491 PKP1Q13835 747 aa13.81□□□□□ -0.2
KCNIP3-206ENST00000475491 KIAA1211Q6ZU35 1233 aa13.81□□□□□ -0.2
KCNIP3-206ENST00000475491 MAP3K15Q6ZN16 1313 aa13.81□□□□□ -0.2
KCNIP3-206ENST00000475491 LRRC37A3O60309 1634 aa13.81□□□□□ -0.2
KCNIP3-206ENST00000475491 LMO7Q8WWI1 1683 aa13.81□□□□□ -0.2
KCNIP3-206ENST00000475491 PTH1RQ03431 593 aa13.8□□□□□ -0.2
KCNIP3-206ENST00000475491 TNNI3KQ59H18 835 aa13.8□□□□□ -0.2
KCNIP3-206ENST00000475491 CNTROBQ8N137 903 aa13.8□□□□□ -0.2
KCNIP3-206ENST00000475491 ZGPATQ8N5A5 531 aaKnown RBP13.8□□□□□ -0.2
KCNIP3-206ENST00000475491 FPGT-TNNI3KV9GXZ4 949 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms