RNA–Protein interactions for RNA: ENST00000475235.1

HLA-DOB-208, Transcript of major histocompatibility complex, class II, DO beta, humanhuman

Gene HLA-DOB, Length 1,514 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOB-208ENST00000475235 ANXA1P04083 346 aa14.88□□□□□ -0.03
HLA-DOB-208ENST00000475235 NPR1P16066 1061 aa14.88□□□□□ -0.03
HLA-DOB-208ENST00000475235 SOGA3Q5TF21 947 aa14.88□□□□□ -0.03
HLA-DOB-208ENST00000475235 DUSP27Q5VZP5 1158 aa14.88□□□□□ -0.03
HLA-DOB-208ENST00000475235 COPS6Q7L5N1 327 aa14.88□□□□□ -0.03
HLA-DOB-208ENST00000475235 ZNF526Q8TF50 670 aaPredicted RBP14.88□□□□□ -0.03
HLA-DOB-208ENST00000475235 GPTP24298 496 aa14.87□□□□□ -0.03
HLA-DOB-208ENST00000475235 C1QTNF8P60827 252 aa14.87□□□□□ -0.03
HLA-DOB-208ENST00000475235 GLIPR1L2Q4G1C9 344 aa14.87□□□□□ -0.03
HLA-DOB-208ENST00000475235 PPP1R42Q7Z4L9 355 aa14.87□□□□□ -0.03
HLA-DOB-208ENST00000475235 XAGE3Q8WTP9 111 aa14.87□□□□□ -0.03
HLA-DOB-208ENST00000475235 RNF181Q9P0P0 153 aa14.87□□□□□ -0.03
HLA-DOB-208ENST00000475235 CHPF2Q9P2E5 772 aa14.87□□□□□ -0.03
HLA-DOB-208ENST00000475235 DLEC1Q9Y238 1755 aa14.87□□□□□ -0.03
HLA-DOB-208ENST00000475235 UBN2Q6ZU65 1347 aa14.87□□□□□ -0.03
HLA-DOB-208ENST00000475235 ZC3H4Q9UPT8 1303 aaKnown RBP14.87□□□□□ -0.03
HLA-DOB-208ENST00000475235 LMNB1P20700 586 aa14.87□□□□□ -0.03
HLA-DOB-208ENST00000475235 AIMP1Q12904 312 aaKnown RBP14.87□□□□□ -0.03
HLA-DOB-208ENST00000475235 PRPF40BQ6NWY9 871 aaKnown RBP14.87□□□□□ -0.03
HLA-DOB-208ENST00000475235 HYPKQ9NX55 129 aa14.87□□□□□ -0.03
HLA-DOB-208ENST00000475235 RIC1Q4ADV7 1423 aa14.86□□□□□ -0.03
HLA-DOB-208ENST00000475235 RNF123Q5XPI4 1314 aa14.86□□□□□ -0.03
HLA-DOB-208ENST00000475235 C21orf2O43822 256 aa14.86□□□□□ -0.03
HLA-DOB-208ENST00000475235 ALDH1B1P30837 517 aa14.86□□□□□ -0.03
HLA-DOB-208ENST00000475235 SUSD4Q5VX71 490 aa14.86□□□□□ -0.03
HLA-DOB-208ENST00000475235 ANKRD31Q8N7Z5 1873 aa14.85□□□□□ -0.03
HLA-DOB-208ENST00000475235 RASSF7Q02833 373 aa14.85□□□□□ -0.03
HLA-DOB-208ENST00000475235 ERFEQ4G0M1 354 aa14.85□□□□□ -0.03
HLA-DOB-208ENST00000475235 NUTM1Q86Y26 1132 aa14.85□□□□□ -0.03
HLA-DOB-208ENST00000475235 WWC1Q8IX03 1113 aa14.85□□□□□ -0.03
HLA-DOB-208ENST00000475235 IL16Q14005 1332 aa14.84□□□□□ -0.03
HLA-DOB-208ENST00000475235 NFKBIEO00221 500 aa14.84□□□□□ -0.03
HLA-DOB-208ENST00000475235 NTSR2O95665 410 aa14.84□□□□□ -0.03
HLA-DOB-208ENST00000475235 TCIRG1Q13488 830 aa14.84□□□□□ -0.03
HLA-DOB-208ENST00000475235 CRY2Q49AN0 593 aa14.84□□□□□ -0.03
HLA-DOB-208ENST00000475235 PLBD2Q8NHP8 589 aa14.84□□□□□ -0.03
HLA-DOB-208ENST00000475235 UTP14AQ9BVJ6 771 aaKnown RBP14.84□□□□□ -0.03
HLA-DOB-208ENST00000475235 ABCC12Q96J65 1359 aa14.84□□□□□ -0.03
HLA-DOB-208ENST00000475235 KDM2BQ8NHM5 1336 aa14.84□□□□□ -0.03
HLA-DOB-208ENST00000475235 LTBP3Q9NS15 1303 aa14.84□□□□□ -0.03
HLA-DOB-208ENST00000475235 ANKRD13DQ6ZTN6 518 aa14.83□□□□□ -0.04
HLA-DOB-208ENST00000475235 TAOK3Q9H2K8 898 aa14.83□□□□□ -0.04
HLA-DOB-208ENST00000475235 COL11A2P13942 1736 aaPredicted RBP14.83□□□□□ -0.04
HLA-DOB-208ENST00000475235 ELL2O00472 640 aaPredicted RBP14.82□□□□□ -0.04
HLA-DOB-208ENST00000475235 ABCB7O75027 752 aa14.82□□□□□ -0.04
HLA-DOB-208ENST00000475235 CCDC93Q567U6 631 aa14.82□□□□□ -0.04
HLA-DOB-208ENST00000475235 RPGRQ92834 1020 aaKnown RBP14.82□□□□□ -0.04
HLA-DOB-208ENST00000475235 SLC10A5Q5PT55 438 aa14.82□□□□□ -0.04
HLA-DOB-208ENST00000475235 CCDC30Q5VVM6 783 aa14.82□□□□□ -0.04
HLA-DOB-208ENST00000475235 NLRP10Q86W26 655 aa14.82□□□□□ -0.04
HLA-DOB-208ENST00000475235 C8orf58Q8NAV2 365 aa14.82□□□□□ -0.04
HLA-DOB-208ENST00000475235 C7orf43Q8WVR3 580 aa14.82□□□□□ -0.04
HLA-DOB-208ENST00000475235 NLRP3Q96P20 1036 aa14.82□□□□□ -0.04
HLA-DOB-208ENST00000475235 KIF3CO14782 793 aa14.81□□□□□ -0.04
HLA-DOB-208ENST00000475235 HOXA10P31260 410 aaPredicted RBP14.81□□□□□ -0.04
HLA-DOB-208ENST00000475235 GOLGA2Q08379 1002 aa14.81□□□□□ -0.04
HLA-DOB-208ENST00000475235 HSP90B1P14625 803 aaKnown RBP14.8□□□□□ -0.04
HLA-DOB-208ENST00000475235 PRELPP51888 382 aa14.8□□□□□ -0.04
HLA-DOB-208ENST00000475235 CC2D2BQ6DHV5 1058 aa14.8□□□□□ -0.04
HLA-DOB-208ENST00000475235 WDR63Q8IWG1 891 aa14.8□□□□□ -0.04
HLA-DOB-208ENST00000475235 RTKN2Q8IZC4 609 aa14.8□□□□□ -0.04
HLA-DOB-208ENST00000475235 FAM9BQ8IZU0 186 aa14.8□□□□□ -0.04
HLA-DOB-208ENST00000475235 TSR2Q969E8 191 aaKnown RBP14.8□□□□□ -0.04
HLA-DOB-208ENST00000475235 RBM17Q96I25 401 aaKnown RBP14.8□□□□□ -0.04
HLA-DOB-208ENST00000475235 TRMT112Q9UI30 125 aaKnown RBP14.8□□□□□ -0.04
HLA-DOB-208ENST00000475235 SH3TC1Q8TE82 1336 aa14.8□□□□□ -0.04
HLA-DOB-208ENST00000475235 CDK11BP21127 795 aaKnown RBP14.79□□□□□ -0.04
HLA-DOB-208ENST00000475235 GRIPAP1Q4V328 841 aa14.79□□□□□ -0.04
HLA-DOB-208ENST00000475235 RIC3Q7Z5B4 369 aa14.79□□□□□ -0.04
HLA-DOB-208ENST00000475235 CRAMP1Q96RY5 1269 aa14.79□□□□□ -0.04
HLA-DOB-208ENST00000475235 NUP98P52948 1817 aa14.79□□□□□ -0.04
HLA-DOB-208ENST00000475235 SENP3-EIF4A1A0A087X0R7 540 aa14.78□□□□□ -0.04
HLA-DOB-208ENST00000475235 DDX58O95786 925 aaKnown RBP14.78□□□□□ -0.04
HLA-DOB-208ENST00000475235 ISCA1Q9BUE6 129 aa14.78□□□□□ -0.04
HLA-DOB-208ENST00000475235 STK31Q9BXU1 1019 aa14.78□□□□□ -0.04
HLA-DOB-208ENST00000475235 NMRK2Q9NPI5 230 aa14.78□□□□□ -0.04
HLA-DOB-208ENST00000475235 GLTPD2A6NH11 291 aa14.77□□□□□ -0.04
HLA-DOB-208ENST00000475235 TOMM70O94826 608 aa14.77□□□□□ -0.04
HLA-DOB-208ENST00000475235 FKBP4Q02790 459 aaKnown RBP eCLIP14.77□□□□□ -0.04
HLA-DOB-208ENST00000475235 TRIM28Q13263 835 aaKnown RBP14.77□□□□□ -0.04
HLA-DOB-208ENST00000475235 TWISTNBQ3B726 338 aaPredicted RBP14.77□□□□□ -0.04
HLA-DOB-208ENST00000475235 DPY19L2Q6NUT2 758 aa14.77□□□□□ -0.04
HLA-DOB-208ENST00000475235 TSPYL6Q8N831 410 aa14.77□□□□□ -0.04
HLA-DOB-208ENST00000475235 TNRC6CQ9HCJ0 1690 aaKnown RBP14.77□□□□□ -0.04
HLA-DOB-208ENST00000475235 AAMPQ13685 434 aa14.76□□□□□ -0.05
HLA-DOB-208ENST00000475235 C16orf71Q8IYS4 520 aaPredicted RBP14.76□□□□□ -0.05
HLA-DOB-208ENST00000475235 TMX4Q9H1E5 349 aaPredicted RBP14.76□□□□□ -0.05
HLA-DOB-208ENST00000475235 PHAXQ9H814 394 aaKnown RBP14.76□□□□□ -0.05
HLA-DOB-208ENST00000475235 SALL2Q9Y467 1007 aaPredicted RBP14.76□□□□□ -0.05
HLA-DOB-208ENST00000475235 ARFGEF2Q9Y6D5 1785 aa14.76□□□□□ -0.05
HLA-DOB-208ENST00000475235 PPEF1O14829 653 aaPredicted RBP14.76□□□□□ -0.05
HLA-DOB-208ENST00000475235 FANCIQ9NVI1 1328 aa14.75□□□□□ -0.05
HLA-DOB-208ENST00000475235 SLX4Q8IY92 1834 aa14.75□□□□□ -0.05
HLA-DOB-208ENST00000475235 ATP5J2-PTCD1G3V325 749 aa14.75□□□□□ -0.05
HLA-DOB-208ENST00000475235 HMGB1P09429 215 aaKnown RBP14.75□□□□□ -0.05
HLA-DOB-208ENST00000475235 HCLS1P14317 486 aaPredicted RBP14.75□□□□□ -0.05
HLA-DOB-208ENST00000475235 POLA2Q14181 598 aa14.75□□□□□ -0.05
HLA-DOB-208ENST00000475235 C3orf67Q6ZVT6 689 aa14.75□□□□□ -0.05
HLA-DOB-208ENST00000475235 PSMD1Q99460 953 aa14.75□□□□□ -0.05
HLA-DOB-208ENST00000475235 MYH16Q9H6N6 1097 aa14.74□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms