RNA–Protein interactions for RNA: ENST00000474961.5

DDX39B-217, Transcript of DExD-box helicase 39B, humanhuman

TSL 2

Gene DDX39B, Length 974 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39B-217ENST00000474961 API5Q9BZZ5 524 aaKnown RBP12.11□□□□□ -0.47
DDX39B-217ENST00000474961 CNTNAP4Q9C0A0 1308 aa12.11□□□□□ -0.47
DDX39B-217ENST00000474961 POTEJP0CG39 1038 aa12.1□□□□□ -0.47
DDX39B-217ENST00000474961 IRX6P78412 446 aaPredicted RBP12.1□□□□□ -0.47
DDX39B-217ENST00000474961 AIMP1Q12904 312 aaKnown RBP12.1□□□□□ -0.47
DDX39B-217ENST00000474961 FKBP5Q13451 457 aaPredicted RBP12.1□□□□□ -0.47
DDX39B-217ENST00000474961 C20orf194Q5TEA3 1177 aa12.1□□□□□ -0.47
DDX39B-217ENST00000474961 COPS6Q7L5N1 327 aa12.1□□□□□ -0.47
DDX39B-217ENST00000474961 CLUAP1Q96AJ1 413 aa12.1□□□□□ -0.47
DDX39B-217ENST00000474961 UBR3Q6ZT12 1888 aa12.09□□□□□ -0.47
DDX39B-217ENST00000474961 MS4A1P11836 297 aa12.09□□□□□ -0.47
DDX39B-217ENST00000474961 RLBP1P12271 317 aa12.09□□□□□ -0.47
DDX39B-217ENST00000474961 IL6STP40189 918 aaPredicted RBP12.09□□□□□ -0.47
DDX39B-217ENST00000474961 BAG6P46379 1132 aa12.09□□□□□ -0.47
DDX39B-217ENST00000474961 EN1Q05925 392 aaPredicted RBP12.09□□□□□ -0.47
DDX39B-217ENST00000474961 PDE3AQ14432 1141 aa12.09□□□□□ -0.47
DDX39B-217ENST00000474961 CCDC125Q86Z20 511 aa12.09□□□□□ -0.47
DDX39B-217ENST00000474961 MICALL2Q8IY33 904 aa12.09□□□□□ -0.47
DDX39B-217ENST00000474961 DZIP1LQ8IYY4 767 aaKnown RBP12.09□□□□□ -0.47
DDX39B-217ENST00000474961 PANK1Q8TE04 598 aa12.09□□□□□ -0.47
DDX39B-217ENST00000474961 CAMKK2Q96RR4 588 aa12.09□□□□□ -0.47
DDX39B-217ENST00000474961 TMEM121BQ9BXQ6 578 aaPredicted RBP12.09□□□□□ -0.47
DDX39B-217ENST00000474961 ARFGEF2Q9Y6D5 1785 aa12.09□□□□□ -0.47
DDX39B-217ENST00000474961 NUP188Q5SRE5 1749 aa12.08□□□□□ -0.47
DDX39B-217ENST00000474961 N4BP2Q86UW6 1770 aaPredicted RBP12.08□□□□□ -0.48
DDX39B-217ENST00000474961 F6X3S4 739 aa12.08□□□□□ -0.48
DDX39B-217ENST00000474961 DDX58O95786 925 aaKnown RBP12.08□□□□□ -0.48
DDX39B-217ENST00000474961 NEFLP07196 543 aa12.08□□□□□ -0.48
DDX39B-217ENST00000474961 HMGB2P26583 209 aaKnown RBP12.08□□□□□ -0.48
DDX39B-217ENST00000474961 EIF5P55010 431 aaKnown RBP12.08□□□□□ -0.48
DDX39B-217ENST00000474961 EZH2Q15910 746 aaKnown RBP12.08□□□□□ -0.48
DDX39B-217ENST00000474961 TTLL7Q6ZT98 887 aa12.08□□□□□ -0.48
DDX39B-217ENST00000474961 PAXIP1Q6ZW49 1069 aaPredicted RBP12.08□□□□□ -0.48
DDX39B-217ENST00000474961 ZNF330Q9Y3S2 320 aaPredicted RBP12.08□□□□□ -0.48
DDX39B-217ENST00000474961 NUP98P52948 1817 aa12.08□□□□□ -0.48
DDX39B-217ENST00000474961 ABCC4O15439 1325 aa12.08□□□□□ -0.48
DDX39B-217ENST00000474961 ADCY9O60503 1353 aa12.07□□□□□ -0.48
DDX39B-217ENST00000474961 PI4KAP2A4QPH2 592 aa12.07□□□□□ -0.48
DDX39B-217ENST00000474961 RPS6KA4O75676 772 aa12.07□□□□□ -0.48
DDX39B-217ENST00000474961 PPP1R37O75864 691 aa12.07□□□□□ -0.48
DDX39B-217ENST00000474961 KSR2Q6VAB6 950 aa12.07□□□□□ -0.48
DDX39B-217ENST00000474961 ANKRD13DQ6ZTN6 518 aa12.07□□□□□ -0.48
DDX39B-217ENST00000474961 DEFB132Q7Z7B7 95 aa12.07□□□□□ -0.48
DDX39B-217ENST00000474961 FTSJ3Q8IY81 847 aaKnown RBP12.07□□□□□ -0.48
DDX39B-217ENST00000474961 PI4KAP1Q8N8J0 262 aa12.07□□□□□ -0.48
DDX39B-217ENST00000474961 OTUD5Q96G74 571 aa12.07□□□□□ -0.48
DDX39B-217ENST00000474961 AFDNP55196 1824 aaKnown RBP12.07□□□□□ -0.48
DDX39B-217ENST00000474961 TUBGCP6Q96RT7 1819 aa12.07□□□□□ -0.48
DDX39B-217ENST00000474961 GNPATO15228 680 aa12.06□□□□□ -0.48
DDX39B-217ENST00000474961 SLC4A10Q6U841 1118 aa12.06□□□□□ -0.48
DDX39B-217ENST00000474961 RIC3Q7Z5B4 369 aa12.06□□□□□ -0.48
DDX39B-217ENST00000474961 NPM2Q86SE8 214 aaKnown RBP12.06□□□□□ -0.48
DDX39B-217ENST00000474961 TMEM57Q8N5G2 664 aa12.06□□□□□ -0.48
DDX39B-217ENST00000474961 PLBD2Q8NHP8 589 aa12.06□□□□□ -0.48
DDX39B-217ENST00000474961 DNAAF4Q8WXU2 420 aa12.06□□□□□ -0.48
DDX39B-217ENST00000474961 AK7Q96M32 723 aa12.06□□□□□ -0.48
DDX39B-217ENST00000474961 ARXQ96QS3 562 aa12.06□□□□□ -0.48
DDX39B-217ENST00000474961 CRBNQ96SW2 442 aa12.06□□□□□ -0.48
DDX39B-217ENST00000474961 MAP3K2Q9Y2U5 619 aa12.06□□□□□ -0.48
DDX39B-217ENST00000474961 RTCBQ9Y3I0 505 aaKnown RBP12.06□□□□□ -0.48
DDX39B-217ENST00000474961 COL15A1P39059 1388 aa12.05□□□□□ -0.48
DDX39B-217ENST00000474961 KIF6Q6ZMV9 814 aa12.05□□□□□ -0.48
DDX39B-217ENST00000474961 SMIM5Q71RC9 77 aa12.05□□□□□ -0.48
DDX39B-217ENST00000474961 DZIP3Q86Y13 1208 aaKnown RBP12.05□□□□□ -0.48
DDX39B-217ENST00000474961 SLAIN1Q8ND83 568 aa12.05□□□□□ -0.48
DDX39B-217ENST00000474961 TBC1D2BQ9UPU7 963 aa12.05□□□□□ -0.48
DDX39B-217ENST00000474961 COG6Q9Y2V7 657 aa12.05□□□□□ -0.48
DDX39B-217ENST00000474961 C4AP0C0L4 1744 aa12.05□□□□□ -0.48
DDX39B-217ENST00000474961 MAP3K15Q6ZN16 1313 aa12.05□□□□□ -0.48
DDX39B-217ENST00000474961 ANKRD36CQ5JPF3 1778 aa12.05□□□□□ -0.48
DDX39B-217ENST00000474961 BCORQ6W2J9 1755 aa12.05□□□□□ -0.48
DDX39B-217ENST00000474961 PXDNLA1KZ92 1463 aa12.04□□□□□ -0.48
DDX39B-217ENST00000474961 A0A087WZG4 1122 aa12.04□□□□□ -0.48
DDX39B-217ENST00000474961 INTS3Q68E01 1043 aaKnown RBP12.04□□□□□ -0.48
DDX39B-217ENST00000474961 AMIGO3Q86WK7 504 aa12.04□□□□□ -0.48
DDX39B-217ENST00000474961 METTL22Q9BUU2 404 aaPredicted RBP12.04□□□□□ -0.48
DDX39B-217ENST00000474961 ZBTB3Q9H5J0 574 aa12.04□□□□□ -0.48
DDX39B-217ENST00000474961 ERVV-1B6SEH8 477 aa12.03□□□□□ -0.48
DDX39B-217ENST00000474961 CCT4P50991 539 aaKnown RBP12.03□□□□□ -0.48
DDX39B-217ENST00000474961 MVPQ14764 893 aaKnown RBP12.03□□□□□ -0.48
DDX39B-217ENST00000474961 ZNF827Q17R98 1081 aa12.03□□□□□ -0.48
DDX39B-217ENST00000474961 BEND3Q5T5X7 828 aa12.03□□□□□ -0.48
DDX39B-217ENST00000474961 ITPRIPQ8IWB1 547 aa12.03□□□□□ -0.48
DDX39B-217ENST00000474961 EXOC6Q8TAG9 804 aa12.03□□□□□ -0.48
DDX39B-217ENST00000474961 PHF14O94880 888 aa12.02□□□□□ -0.49
DDX39B-217ENST00000474961 CAMTA2O94983 1202 aa12.02□□□□□ -0.49
DDX39B-217ENST00000474961 HLFQ16534 295 aa12.02□□□□□ -0.49
DDX39B-217ENST00000474961 TRAPPC3LQ5T215 181 aa12.02□□□□□ -0.49
DDX39B-217ENST00000474961 ARHGEF1Q92888 912 aaKnown RBP12.02□□□□□ -0.49
DDX39B-217ENST00000474961 MYD88Q99836 296 aa12.02□□□□□ -0.49
DDX39B-217ENST00000474961 SRCIN1Q9C0H9 1055 aa12.02□□□□□ -0.49
DDX39B-217ENST00000474961 SCN7AQ01118 1682 aa12.02□□□□□ -0.49
DDX39B-217ENST00000474961 QSER1Q2KHR3 1735 aa12.02□□□□□ -0.49
DDX39B-217ENST00000474961 ATP10DQ9P241 1426 aa12.02□□□□□ -0.49
DDX39B-217ENST00000474961 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.01□□□□□ -0.49
DDX39B-217ENST00000474961 ALDH1L1O75891 902 aa12.01□□□□□ -0.49
DDX39B-217ENST00000474961 SSFA2P28290 1259 aa12.01□□□□□ -0.49
DDX39B-217ENST00000474961 NEXNQ0ZGT2 675 aa12.01□□□□□ -0.49
DDX39B-217ENST00000474961 TCIRG1Q13488 830 aa12.01□□□□□ -0.49
DDX39B-217ENST00000474961 GIGYF2Q6Y7W6 1299 aaKnown RBP12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 225.7 ms