RNA–Protein interactions for RNA: ENST00000474805.5

TRIM13-207, Transcript of tripartite motif containing 13, humanhuman

TSL 5

Gene TRIM13, Length 403 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13-207ENST00000474805 NUP98P52948 1817 aa16.66■□□□□ 0.26
TRIM13-207ENST00000474805 TRAF5O00463 557 aa16.65■□□□□ 0.26
TRIM13-207ENST00000474805 PRKAR2BP31323 418 aa16.65■□□□□ 0.26
TRIM13-207ENST00000474805 ECE1P42892 770 aa16.65■□□□□ 0.26
TRIM13-207ENST00000474805 CST9Q5W186 159 aa16.65■□□□□ 0.26
TRIM13-207ENST00000474805 CASP8AP2Q9UKL3 1982 aa16.65■□□□□ 0.26
TRIM13-207ENST00000474805 RGS19P49795 217 aa16.64■□□□□ 0.25
TRIM13-207ENST00000474805 SCNN1DP51172 638 aa16.64■□□□□ 0.25
TRIM13-207ENST00000474805 MCM10Q7L590 875 aa16.64■□□□□ 0.25
TRIM13-207ENST00000474805 NUTM1Q86Y26 1132 aa16.64■□□□□ 0.25
TRIM13-207ENST00000474805 RGL2O15211 777 aa16.63■□□□□ 0.25
TRIM13-207ENST00000474805 AOC2O75106 756 aa16.63■□□□□ 0.25
TRIM13-207ENST00000474805 CRY2Q49AN0 593 aa16.63■□□□□ 0.25
TRIM13-207ENST00000474805 LARGE2Q8N3Y3 721 aa16.63■□□□□ 0.25
TRIM13-207ENST00000474805 ABCC12Q96J65 1359 aa16.63■□□□□ 0.25
TRIM13-207ENST00000474805 TCERG1O14776 1098 aaKnown RBP16.62■□□□□ 0.25
TRIM13-207ENST00000474805 CC2D2BQ6DHV5 1058 aa16.62■□□□□ 0.25
TRIM13-207ENST00000474805 SLC51AQ86UW1 340 aa16.62■□□□□ 0.25
TRIM13-207ENST00000474805 NGEFQ8N5V2 710 aa16.62■□□□□ 0.25
TRIM13-207ENST00000474805 RSPH6AQ9H0K4 717 aa16.62■□□□□ 0.25
TRIM13-207ENST00000474805 TLL2Q9Y6L7 1015 aa16.62■□□□□ 0.25
TRIM13-207ENST00000474805 DCTN1Q14203 1278 aa16.61■□□□□ 0.25
TRIM13-207ENST00000474805 USP50Q70EL3 339 aaPredicted RBP16.61■□□□□ 0.25
TRIM13-207ENST00000474805 RTF1Q92541 710 aaKnown RBP16.61■□□□□ 0.25
TRIM13-207ENST00000474805 RPGRQ92834 1020 aaKnown RBP16.6■□□□□ 0.25
TRIM13-207ENST00000474805 CFAP44Q96MT7 982 aa16.6■□□□□ 0.25
TRIM13-207ENST00000474805 NYXQ9GZU5 481 aa16.6■□□□□ 0.25
TRIM13-207ENST00000474805 HOXA10P31260 410 aaPredicted RBP16.59■□□□□ 0.25
TRIM13-207ENST00000474805 MAP2K2P36507 400 aa16.59■□□□□ 0.25
TRIM13-207ENST00000474805 MIS18AQ9NYP9 233 aa16.59■□□□□ 0.25
TRIM13-207ENST00000474805 LAMB4A4D0S4 1761 aa16.59■□□□□ 0.25
TRIM13-207ENST00000474805 NIM1KQ8IY84 436 aa16.58■□□□□ 0.24
TRIM13-207ENST00000474805 MCOLN1Q9GZU1 580 aa16.58■□□□□ 0.24
TRIM13-207ENST00000474805 CELF2O95319 508 aaKnown RBP16.57■□□□□ 0.24
TRIM13-207ENST00000474805 GPTP24298 496 aa16.57■□□□□ 0.24
TRIM13-207ENST00000474805 GRIPAP1Q4V328 841 aa16.57■□□□□ 0.24
TRIM13-207ENST00000474805 SAPCD2Q86UD0 394 aa16.57■□□□□ 0.24
TRIM13-207ENST00000474805 ADARB2Q9NS39 739 aaKnown RBP16.57■□□□□ 0.24
TRIM13-207ENST00000474805 GPRC5DQ9NZD1 345 aa16.57■□□□□ 0.24
TRIM13-207ENST00000474805 NPC1L1Q9UHC9 1359 aa16.56■□□□□ 0.24
TRIM13-207ENST00000474805 ERVV-1B6SEH8 477 aa16.56■□□□□ 0.24
TRIM13-207ENST00000474805 PPEF1O14829 653 aaPredicted RBP16.56■□□□□ 0.24
TRIM13-207ENST00000474805 PPIP5K2O43314 1243 aa16.56■□□□□ 0.24
TRIM13-207ENST00000474805 TAF7Q15545 349 aaPredicted RBP16.56■□□□□ 0.24
TRIM13-207ENST00000474805 SUSD4Q5VX71 490 aa16.56■□□□□ 0.24
TRIM13-207ENST00000474805 TTLL7Q6ZT98 887 aa16.56■□□□□ 0.24
TRIM13-207ENST00000474805 RBM17Q96I25 401 aaKnown RBP16.56■□□□□ 0.24
TRIM13-207ENST00000474805 CRAMP1Q96RY5 1269 aa16.56■□□□□ 0.24
TRIM13-207ENST00000474805 RRP7AQ9Y3A4 280 aaKnown RBP16.56■□□□□ 0.24
TRIM13-207ENST00000474805 MAP3K15Q6ZN16 1313 aa16.55■□□□□ 0.24
TRIM13-207ENST00000474805 UBN2Q6ZU65 1347 aa16.55■□□□□ 0.24
TRIM13-207ENST00000474805 U2AF1L5P0DN76 240 aaPredicted RBP16.55■□□□□ 0.24
TRIM13-207ENST00000474805 U2AF1Q01081 240 aaKnown RBP eCLIP16.55■□□□□ 0.24
TRIM13-207ENST00000474805 AOC3Q16853 763 aa16.55■□□□□ 0.24
TRIM13-207ENST00000474805 C3orf67Q6ZVT6 689 aa16.55■□□□□ 0.24
TRIM13-207ENST00000474805 CFAP53Q96M91 514 aa16.55■□□□□ 0.24
TRIM13-207ENST00000474805 GLIS2Q9BZE0 524 aaPredicted RBP16.55■□□□□ 0.24
TRIM13-207ENST00000474805 CXCL9Q07325 125 aa16.54■□□□□ 0.24
TRIM13-207ENST00000474805 ZBTB3Q9H5J0 574 aa16.54■□□□□ 0.24
TRIM13-207ENST00000474805 ZNF408Q9H9D4 720 aa16.54■□□□□ 0.24
TRIM13-207ENST00000474805 NUDCQ9Y266 331 aa16.54■□□□□ 0.24
TRIM13-207ENST00000474805 RIC1Q4ADV7 1423 aa16.53■□□□□ 0.24
TRIM13-207ENST00000474805 DLG5Q8TDM6 1919 aa16.53■□□□□ 0.24
TRIM13-207ENST00000474805 CA12O43570 354 aa16.53■□□□□ 0.24
TRIM13-207ENST00000474805 HTATSF1O43719 755 aaKnown RBP16.53■□□□□ 0.24
TRIM13-207ENST00000474805 MYL6BP14649 208 aa16.53■□□□□ 0.24
TRIM13-207ENST00000474805 DGKZQ13574 1117 aa16.53■□□□□ 0.24
TRIM13-207ENST00000474805 KIF6Q6ZMV9 814 aa16.53■□□□□ 0.24
TRIM13-207ENST00000474805 PCDH10Q9P2E7 1040 aa16.53■□□□□ 0.24
TRIM13-207ENST00000474805 KDM3BQ7LBC6 1761 aa16.52■□□□□ 0.24
TRIM13-207ENST00000474805 GMPSP49915 693 aaPredicted RBP16.52■□□□□ 0.24
TRIM13-207ENST00000474805 BRPF1P55201 1214 aaPredicted RBP16.52■□□□□ 0.24
TRIM13-207ENST00000474805 CIAPIN1Q6FI81 312 aa16.52■□□□□ 0.24
TRIM13-207ENST00000474805 ZNF34Q8IZ26 560 aa16.52■□□□□ 0.24
TRIM13-207ENST00000474805 ZNRF3Q9ULT6 936 aa16.52■□□□□ 0.24
TRIM13-207ENST00000474805 POLR2AP24928 1970 aaKnown RBP16.51■□□□□ 0.23
TRIM13-207ENST00000474805 NTSR2O95665 410 aa16.51■□□□□ 0.23
TRIM13-207ENST00000474805 HIRAP54198 1017 aaPredicted RBP16.51■□□□□ 0.23
TRIM13-207ENST00000474805 HHIPL1Q96JK4 782 aa16.51■□□□□ 0.23
TRIM13-207ENST00000474805 ZIC5Q96T25 663 aa16.51■□□□□ 0.23
TRIM13-207ENST00000474805 TMX4Q9H1E5 349 aaPredicted RBP16.51■□□□□ 0.23
TRIM13-207ENST00000474805 PGAP2Q9UHJ9 254 aa16.51■□□□□ 0.23
TRIM13-207ENST00000474805 ATP6V0A2Q9Y487 856 aa16.51■□□□□ 0.23
TRIM13-207ENST00000474805 TNRC18O15417 2968 aaPredicted RBP16.51■□□□□ 0.23
TRIM13-207ENST00000474805 IBTKQ9P2D0 1353 aaPredicted RBP16.51■□□□□ 0.23
TRIM13-207ENST00000474805 PDE4DIPQ5VU43 2346 aa16.5■□□□□ 0.23
TRIM13-207ENST00000474805 NLRP3Q96P20 1036 aa16.5■□□□□ 0.23
TRIM13-207ENST00000474805 BCL2L13Q9BXK5 485 aa16.5■□□□□ 0.23
TRIM13-207ENST00000474805 VPS33BQ9H267 617 aa16.5■□□□□ 0.23
TRIM13-207ENST00000474805 LAMB2P55268 1798 aa16.49■□□□□ 0.23
TRIM13-207ENST00000474805 RAD17O75943 681 aa16.49■□□□□ 0.23
TRIM13-207ENST00000474805 TAF1P21675 1872 aa16.49■□□□□ 0.23
TRIM13-207ENST00000474805 CCER1Q8TC90 406 aaPredicted RBP16.49■□□□□ 0.23
TRIM13-207ENST00000474805 EIF4A1P60842 406 aaKnown RBP16.48■□□□□ 0.23
TRIM13-207ENST00000474805 DLK2Q6UY11 383 aa16.48■□□□□ 0.23
TRIM13-207ENST00000474805 GIGYF2Q6Y7W6 1299 aaKnown RBP16.48■□□□□ 0.23
TRIM13-207ENST00000474805 CDC37L1Q7L3B6 337 aa16.48■□□□□ 0.23
TRIM13-207ENST00000474805 PPP1R42Q7Z4L9 355 aa16.48■□□□□ 0.23
TRIM13-207ENST00000474805 SUPT20HQ8NEM7 779 aa16.48■□□□□ 0.23
TRIM13-207ENST00000474805 TRPM4Q8TD43 1214 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms