RNA–Protein interactions for RNA: ENST00000474568.5

ITGB1-210, Transcript of integrin subunit beta 1, humanhuman

TSL 5

Gene ITGB1, Length 788 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-210ENST00000474568 DLEC1Q9Y238 1755 aa20.63■□□□□ 0.89
ITGB1-210ENST00000474568 ARFGEF1Q9Y6D6 1849 aa20.62■□□□□ 0.89
ITGB1-210ENST00000474568 KLRG2A4D1S0 409 aaPredicted RBP20.62■□□□□ 0.89
ITGB1-210ENST00000474568 EXOSC9Q06265 439 aaKnown RBP20.62■□□□□ 0.89
ITGB1-210ENST00000474568 SYNE4Q8N205 404 aa20.62■□□□□ 0.89
ITGB1-210ENST00000474568 TRMT112Q9UI30 125 aaKnown RBP20.62■□□□□ 0.89
ITGB1-210ENST00000474568 TNRC6CQ9HCJ0 1690 aaKnown RBP20.61■□□□□ 0.89
ITGB1-210ENST00000474568 CCER2I3L3R5 266 aa20.61■□□□□ 0.89
ITGB1-210ENST00000474568 NFKBIEO00221 500 aa20.61■□□□□ 0.89
ITGB1-210ENST00000474568 STK31Q9BXU1 1019 aa20.61■□□□□ 0.89
ITGB1-210ENST00000474568 HCLS1P14317 486 aaPredicted RBP20.6■□□□□ 0.89
ITGB1-210ENST00000474568 PRELPP51888 382 aa20.6■□□□□ 0.89
ITGB1-210ENST00000474568 DIEXFQ68CQ4 756 aaKnown RBP20.6■□□□□ 0.89
ITGB1-210ENST00000474568 OLFM4Q6UX06 510 aa20.6■□□□□ 0.89
ITGB1-210ENST00000474568 RPGRQ92834 1020 aaKnown RBP20.6■□□□□ 0.89
ITGB1-210ENST00000474568 GPBP1L1Q9HC44 474 aaPredicted RBP20.6■□□□□ 0.89
ITGB1-210ENST00000474568 RTL5Q5HYW3 569 aaPredicted RBP20.59■□□□□ 0.89
ITGB1-210ENST00000474568 MYD88Q99836 296 aa20.59■□□□□ 0.89
ITGB1-210ENST00000474568 ISCA1Q9BUE6 129 aa20.59■□□□□ 0.89
ITGB1-210ENST00000474568 CHMP4AQ9BY43 222 aa20.59■□□□□ 0.89
ITGB1-210ENST00000474568 MYH16Q9H6N6 1097 aa20.59■□□□□ 0.89
ITGB1-210ENST00000474568 CRY2Q49AN0 593 aa20.58■□□□□ 0.89
ITGB1-210ENST00000474568 G2E3Q7L622 706 aa20.58■□□□□ 0.89
ITGB1-210ENST00000474568 NLRP3Q96P20 1036 aa20.58■□□□□ 0.89
ITGB1-210ENST00000474568 SH3TC1Q8TE82 1336 aa20.57■□□□□ 0.88
ITGB1-210ENST00000474568 SLC4A2P04920 1241 aa20.57■□□□□ 0.88
ITGB1-210ENST00000474568 FAM89AQ96GI7 184 aa20.57■□□□□ 0.88
ITGB1-210ENST00000474568 SLX4Q8IY92 1834 aa20.57■□□□□ 0.88
ITGB1-210ENST00000474568 VAMP4O75379 141 aa20.56■□□□□ 0.88
ITGB1-210ENST00000474568 DDX58O95786 925 aaKnown RBP20.56■□□□□ 0.88
ITGB1-210ENST00000474568 LMNB1P20700 586 aa20.56■□□□□ 0.88
ITGB1-210ENST00000474568 ALDH1B1P30837 517 aa20.56■□□□□ 0.88
ITGB1-210ENST00000474568 SLC10A5Q5PT55 438 aa20.56■□□□□ 0.88
ITGB1-210ENST00000474568 SLC51AQ86UW1 340 aa20.56■□□□□ 0.88
ITGB1-210ENST00000474568 MIER1Q8N108 512 aa20.56■□□□□ 0.88
ITGB1-210ENST00000474568 C7orf43Q8WVR3 580 aa20.56■□□□□ 0.88
ITGB1-210ENST00000474568 RBM17Q96I25 401 aaKnown RBP20.56■□□□□ 0.88
ITGB1-210ENST00000474568 MAP3K2Q9Y2U5 619 aa20.56■□□□□ 0.88
ITGB1-210ENST00000474568 ZNF521Q96K83 1311 aa20.55■□□□□ 0.88
ITGB1-210ENST00000474568 RIC1Q4ADV7 1423 aa20.55■□□□□ 0.88
ITGB1-210ENST00000474568 CCDC93Q567U6 631 aa20.55■□□□□ 0.88
ITGB1-210ENST00000474568 TAOK3Q9H2K8 898 aa20.55■□□□□ 0.88
ITGB1-210ENST00000474568 RNF123Q5XPI4 1314 aa20.54■□□□□ 0.88
ITGB1-210ENST00000474568 PI4KAP2A4QPH2 592 aa20.54■□□□□ 0.88
ITGB1-210ENST00000474568 SOGA3Q5TF21 947 aa20.54■□□□□ 0.88
ITGB1-210ENST00000474568 PI4KAP1Q8N8J0 262 aa20.54■□□□□ 0.88
ITGB1-210ENST00000474568 JARID2Q92833 1246 aaPredicted RBP20.54■□□□□ 0.88
ITGB1-210ENST00000474568 ANKRD36CQ5JPF3 1778 aa20.54■□□□□ 0.88
ITGB1-210ENST00000474568 HOXA10P31260 410 aaPredicted RBP20.53■□□□□ 0.88
ITGB1-210ENST00000474568 KSR2Q6VAB6 950 aa20.53■□□□□ 0.88
ITGB1-210ENST00000474568 METTL22Q9BUU2 404 aaPredicted RBP20.53■□□□□ 0.88
ITGB1-210ENST00000474568 CACNA1SQ13698 1873 aa20.53■□□□□ 0.88
ITGB1-210ENST00000474568 PPEF1O14829 653 aaPredicted RBP20.51■□□□□ 0.87
ITGB1-210ENST00000474568 FLIIQ13045 1269 aa20.51■□□□□ 0.87
ITGB1-210ENST00000474568 TRIM28Q13263 835 aaKnown RBP20.51■□□□□ 0.87
ITGB1-210ENST00000474568 CRAMP1Q96RY5 1269 aa20.51■□□□□ 0.87
ITGB1-210ENST00000474568 NMRK2Q9NPI5 230 aa20.51■□□□□ 0.87
ITGB1-210ENST00000474568 ARFGEF2Q9Y6D5 1785 aa20.51■□□□□ 0.87
ITGB1-210ENST00000474568 ABCC4O15439 1325 aa20.51■□□□□ 0.87
ITGB1-210ENST00000474568 IRS4O14654 1257 aaPredicted RBP20.5■□□□□ 0.87
ITGB1-210ENST00000474568 FKBP5Q13451 457 aaPredicted RBP20.5■□□□□ 0.87
ITGB1-210ENST00000474568 ZNF277Q9NRM2 450 aaPredicted RBP20.5■□□□□ 0.87
ITGB1-210ENST00000474568 CWC25Q9NXE8 425 aaPredicted RBP20.5■□□□□ 0.87
ITGB1-210ENST00000474568 FKBP4Q02790 459 aaKnown RBP eCLIP20.49■□□□□ 0.87
ITGB1-210ENST00000474568 DDX46Q7L014 1031 aaKnown RBP20.49■□□□□ 0.87
ITGB1-210ENST00000474568 CDCA7LQ96GN5 454 aa20.49■□□□□ 0.87
ITGB1-210ENST00000474568 LTBP3Q9NS15 1303 aa20.49■□□□□ 0.87
ITGB1-210ENST00000474568 IGKV5-2P06315 115 aa20.48■□□□□ 0.87
ITGB1-210ENST00000474568 C1QTNF8P60827 252 aa20.48■□□□□ 0.87
ITGB1-210ENST00000474568 CWF19L2Q2TBE0 894 aaKnown RBP20.48■□□□□ 0.87
ITGB1-210ENST00000474568 RTKN2Q8IZC4 609 aa20.48■□□□□ 0.87
ITGB1-210ENST00000474568 ZBTB38Q8NAP3 1195 aaPredicted RBP20.48■□□□□ 0.87
ITGB1-210ENST00000474568 CCDC191Q8NCU4 936 aa20.48■□□□□ 0.87
ITGB1-210ENST00000474568 E9PSI1 815 aa20.47■□□□□ 0.87
ITGB1-210ENST00000474568 KIF3CO14782 793 aa20.47■□□□□ 0.87
ITGB1-210ENST00000474568 NEXNQ0ZGT2 675 aa20.47■□□□□ 0.87
ITGB1-210ENST00000474568 SBF1O95248 1867 aa20.46■□□□□ 0.87
ITGB1-210ENST00000474568 SLFN5Q08AF3 891 aa20.46■□□□□ 0.87
ITGB1-210ENST00000474568 KDM2BQ8NHM5 1336 aa20.46■□□□□ 0.87
ITGB1-210ENST00000474568 PCCAP05165 728 aaPredicted RBP20.45■□□□□ 0.86
ITGB1-210ENST00000474568 GRAPQ13588 217 aa20.45■□□□□ 0.86
ITGB1-210ENST00000474568 GRAPLQ8TC17 118 aaPredicted RBP20.45■□□□□ 0.86
ITGB1-210ENST00000474568 CCDC85AQ96PX6 553 aaPredicted RBP20.45■□□□□ 0.86
ITGB1-210ENST00000474568 RRAGCQ9HB90 399 aa20.45■□□□□ 0.86
ITGB1-210ENST00000474568 FER1L6Q2WGJ9 1857 aa20.45■□□□□ 0.86
ITGB1-210ENST00000474568 NEURL1BA8MQ27 555 aa20.44■□□□□ 0.86
ITGB1-210ENST00000474568 F6X3S4 739 aa20.44■□□□□ 0.86
ITGB1-210ENST00000474568 DNAAF4Q8WXU2 420 aa20.44■□□□□ 0.86
ITGB1-210ENST00000474568 TMX4Q9H1E5 349 aaPredicted RBP20.44■□□□□ 0.86
ITGB1-210ENST00000474568 ATP6V0A2Q9Y487 856 aa20.44■□□□□ 0.86
ITGB1-210ENST00000474568 ZC3H4Q9UPT8 1303 aaKnown RBP20.44■□□□□ 0.86
ITGB1-210ENST00000474568 IARSP41252 1262 aaKnown RBP20.43■□□□□ 0.86
ITGB1-210ENST00000474568 SF3B3Q15393 1217 aaKnown RBP20.43■□□□□ 0.86
ITGB1-210ENST00000474568 CC2D2BQ6DHV5 1058 aa20.43■□□□□ 0.86
ITGB1-210ENST00000474568 CELF1Q92879 486 aaKnown RBP20.43■□□□□ 0.86
ITGB1-210ENST00000474568 GLTPD2A6NH11 291 aa20.42■□□□□ 0.86
ITGB1-210ENST00000474568 BBOX1O75936 387 aa20.42■□□□□ 0.86
ITGB1-210ENST00000474568 SNED1Q8TER0 1413 aa20.42■□□□□ 0.86
ITGB1-210ENST00000474568 LAMB2P55268 1798 aa20.41■□□□□ 0.86
ITGB1-210ENST00000474568 PDE8AO60658 829 aa20.41■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms