RNA–Protein interactions for RNA: ENST00000474564.1

COL12A1-206, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 3

Gene COL12A1, Length 499 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-206ENST00000474564 PCCAP05165 728 aaPredicted RBP12.91□□□□□ -0.34
COL12A1-206ENST00000474564 B4GALNT3Q6L9W6 998 aa12.91□□□□□ -0.34
COL12A1-206ENST00000474564 BICDL1Q6ZP65 573 aa12.91□□□□□ -0.34
COL12A1-206ENST00000474564 UBE3BQ7Z3V4 1068 aa12.91□□□□□ -0.34
COL12A1-206ENST00000474564 NBPF5PQ86XG9 351 aaPredicted RBP12.91□□□□□ -0.34
COL12A1-206ENST00000474564 UTYO14607 1347 aa12.9□□□□□ -0.34
COL12A1-206ENST00000474564 SH3TC1Q8TE82 1336 aa12.9□□□□□ -0.34
COL12A1-206ENST00000474564 TAF1LQ8IZX4 1826 aa12.9□□□□□ -0.34
COL12A1-206ENST00000474564 H7C1W4 665 aa12.9□□□□□ -0.34
COL12A1-206ENST00000474564 NBPF7P0C2Y1 421 aaPredicted RBP12.9□□□□□ -0.34
COL12A1-206ENST00000474564 SLC16A10Q8TF71 515 aa12.9□□□□□ -0.34
COL12A1-206ENST00000474564 SRP68Q9UHB9 627 aaKnown RBP12.9□□□□□ -0.34
COL12A1-206ENST00000474564 LRRFIP2Q9Y608 721 aaKnown RBP12.9□□□□□ -0.34
COL12A1-206ENST00000474564 FAM177BA6PVY3 158 aa12.89□□□□□ -0.35
COL12A1-206ENST00000474564 ZNF827Q17R98 1081 aa12.89□□□□□ -0.35
COL12A1-206ENST00000474564 COL23A1Q86Y22 540 aaPredicted RBP12.89□□□□□ -0.35
COL12A1-206ENST00000474564 PDE8AO60658 829 aa12.88□□□□□ -0.35
COL12A1-206ENST00000474564 ST5P78524 1137 aa12.88□□□□□ -0.35
COL12A1-206ENST00000474564 ATP8B2P98198 1209 aa12.88□□□□□ -0.35
COL12A1-206ENST00000474564 HSP90AB4PQ58FF6 505 aa12.88□□□□□ -0.35
COL12A1-206ENST00000474564 TBC1D9BQ66K14 1250 aa12.88□□□□□ -0.35
COL12A1-206ENST00000474564 CENPQQ7L2Z9 268 aaPredicted RBP12.88□□□□□ -0.35
COL12A1-206ENST00000474564 CHMP3Q9Y3E7 222 aa12.88□□□□□ -0.35
COL12A1-206ENST00000474564 PARP3Q9Y6F1 533 aa12.88□□□□□ -0.35
COL12A1-206ENST00000474564 CARMIL3Q8ND23 1372 aa12.88□□□□□ -0.35
COL12A1-206ENST00000474564 CDHR2Q9BYE9 1310 aa12.88□□□□□ -0.35
COL12A1-206ENST00000474564 ARFGEF2Q9Y6D5 1785 aa12.87□□□□□ -0.35
COL12A1-206ENST00000474564 IRS4O14654 1257 aaPredicted RBP12.87□□□□□ -0.35
COL12A1-206ENST00000474564 GYS1P13807 737 aa12.87□□□□□ -0.35
COL12A1-206ENST00000474564 HDAC1Q13547 482 aaPredicted RBP12.87□□□□□ -0.35
COL12A1-206ENST00000474564 TAF7LQ5H9L4 462 aa12.87□□□□□ -0.35
COL12A1-206ENST00000474564 RTL5Q5HYW3 569 aaPredicted RBP12.87□□□□□ -0.35
COL12A1-206ENST00000474564 SUSD4Q5VX71 490 aa12.87□□□□□ -0.35
COL12A1-206ENST00000474564 ANKRD44Q8N8A2 993 aa12.87□□□□□ -0.35
COL12A1-206ENST00000474564 FAM89AQ96GI7 184 aa12.87□□□□□ -0.35
COL12A1-206ENST00000474564 C1orf115Q9H7X2 142 aa12.87□□□□□ -0.35
COL12A1-206ENST00000474564 MYH14Q7Z406 1995 aaKnown RBP12.87□□□□□ -0.35
COL12A1-206ENST00000474564 PNPLA7Q6ZV29 1317 aa12.87□□□□□ -0.35
COL12A1-206ENST00000474564 SRGAP3O43295 1099 aa12.86□□□□□ -0.35
COL12A1-206ENST00000474564 OS9Q13438 667 aaPredicted RBP12.86□□□□□ -0.35
COL12A1-206ENST00000474564 NFIXQ14938 502 aa12.86□□□□□ -0.35
COL12A1-206ENST00000474564 CCDC57Q2TAC2 916 aa12.86□□□□□ -0.35
COL12A1-206ENST00000474564 SMIM5Q71RC9 77 aa12.86□□□□□ -0.35
COL12A1-206ENST00000474564 CNBD1Q8NA66 436 aa12.86□□□□□ -0.35
COL12A1-206ENST00000474564 GCC1Q96CN9 775 aa12.86□□□□□ -0.35
COL12A1-206ENST00000474564 NLRP3Q96P20 1036 aa12.86□□□□□ -0.35
COL12A1-206ENST00000474564 SERPINB2P05120 415 aa12.85□□□□□ -0.35
COL12A1-206ENST00000474564 CCDC152Q4G0S7 254 aa12.85□□□□□ -0.35
COL12A1-206ENST00000474564 CEP85Q6P2H3 762 aa12.85□□□□□ -0.35
COL12A1-206ENST00000474564 SUCLG2Q96I99 432 aa12.85□□□□□ -0.35
COL12A1-206ENST00000474564 PLA2G12BQ9BX93 195 aa12.85□□□□□ -0.35
COL12A1-206ENST00000474564 BICC1Q9H694 974 aaKnown RBP12.85□□□□□ -0.35
COL12A1-206ENST00000474564 BCL2L12Q9HB09 334 aa12.85□□□□□ -0.35
COL12A1-206ENST00000474564 PCDHB15Q9Y5E8 787 aa12.85□□□□□ -0.35
COL12A1-206ENST00000474564 POLD1P28340 1107 aa12.84□□□□□ -0.35
COL12A1-206ENST00000474564 TM4SF1P30408 202 aa12.84□□□□□ -0.35
COL12A1-206ENST00000474564 G3BP1Q13283 466 aaKnown RBP eCLIP12.84□□□□□ -0.35
COL12A1-206ENST00000474564 IFIT5Q13325 482 aaKnown RBP12.84□□□□□ -0.35
COL12A1-206ENST00000474564 SLC10A5Q5PT55 438 aa12.84□□□□□ -0.35
COL12A1-206ENST00000474564 LMBR1LQ6UX01 489 aa12.84□□□□□ -0.35
COL12A1-206ENST00000474564 JARID2Q92833 1246 aaPredicted RBP12.84□□□□□ -0.35
COL12A1-206ENST00000474564 NUP188Q5SRE5 1749 aa12.84□□□□□ -0.35
COL12A1-206ENST00000474564 UBN2Q6ZU65 1347 aa12.84□□□□□ -0.35
COL12A1-206ENST00000474564 UBR3Q6ZT12 1888 aa12.83□□□□□ -0.36
COL12A1-206ENST00000474564 ANKRD18BA2A2Z9 1011 aa12.83□□□□□ -0.36
COL12A1-206ENST00000474564 NTSR2O95665 410 aa12.83□□□□□ -0.36
COL12A1-206ENST00000474564 MTX1Q13505 466 aa12.83□□□□□ -0.36
COL12A1-206ENST00000474564 AMIGO3Q86WK7 504 aa12.83□□□□□ -0.36
COL12A1-206ENST00000474564 ERC1Q8IUD2 1116 aa12.83□□□□□ -0.36
COL12A1-206ENST00000474564 ANO8Q9HCE9 1232 aaPredicted RBP12.83□□□□□ -0.36
COL12A1-206ENST00000474564 NUP98P52948 1817 aa12.83□□□□□ -0.36
COL12A1-206ENST00000474564 AFDNP55196 1824 aaKnown RBP12.83□□□□□ -0.36
COL12A1-206ENST00000474564 N4BP2Q86UW6 1770 aaPredicted RBP12.82□□□□□ -0.36
COL12A1-206ENST00000474564 RAB11FIP3O75154 756 aa12.82□□□□□ -0.36
COL12A1-206ENST00000474564 SURF6O75683 361 aaKnown RBP12.82□□□□□ -0.36
COL12A1-206ENST00000474564 MMP10P09238 476 aa12.82□□□□□ -0.36
COL12A1-206ENST00000474564 CASP7P55210 303 aa12.82□□□□□ -0.36
COL12A1-206ENST00000474564 CTSWP56202 376 aa12.82□□□□□ -0.36
COL12A1-206ENST00000474564 RABL6Q3YEC7 729 aaPredicted RBP12.82□□□□□ -0.36
COL12A1-206ENST00000474564 ERFEQ4G0M1 354 aa12.82□□□□□ -0.36
COL12A1-206ENST00000474564 NUTM1Q86Y26 1132 aa12.82□□□□□ -0.36
COL12A1-206ENST00000474564 SSH3Q8TE77 659 aa12.82□□□□□ -0.36
COL12A1-206ENST00000474564 CDC5LQ99459 802 aaKnown RBP12.82□□□□□ -0.36
COL12A1-206ENST00000474564 PDZRN3Q9UPQ7 1066 aa12.82□□□□□ -0.36
COL12A1-206ENST00000474564 SCN7AQ01118 1682 aa12.81□□□□□ -0.36
COL12A1-206ENST00000474564 HCLS1P14317 486 aaPredicted RBP12.81□□□□□ -0.36
COL12A1-206ENST00000474564 PDE6BP35913 854 aa12.81□□□□□ -0.36
COL12A1-206ENST00000474564 FOXO4P98177 505 aa12.81□□□□□ -0.36
COL12A1-206ENST00000474564 R3HDM1Q15032 1099 aaKnown RBP12.81□□□□□ -0.36
COL12A1-206ENST00000474564 RPGRQ92834 1020 aaKnown RBP12.81□□□□□ -0.36
COL12A1-206ENST00000474564 TMX4Q9H1E5 349 aaPredicted RBP12.81□□□□□ -0.36
COL12A1-206ENST00000474564 FBXO3Q9UK99 471 aa12.81□□□□□ -0.36
COL12A1-206ENST00000474564 ANKRD36CQ5JPF3 1778 aa12.81□□□□□ -0.36
COL12A1-206ENST00000474564 BCORQ6W2J9 1755 aa12.81□□□□□ -0.36
COL12A1-206ENST00000474564 CSF1RP07333 972 aa12.8□□□□□ -0.36
COL12A1-206ENST00000474564 IGHMBP2P38935 993 aaKnown RBP12.8□□□□□ -0.36
COL12A1-206ENST00000474564 POLA2Q14181 598 aa12.8□□□□□ -0.36
COL12A1-206ENST00000474564 MSL1Q68DK7 614 aa12.8□□□□□ -0.36
COL12A1-206ENST00000474564 ILDR2Q71H61 639 aa12.8□□□□□ -0.36
COL12A1-206ENST00000474564 DDX46Q7L014 1031 aaKnown RBP12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms