RNA–Protein interactions for RNA: ENST00000474273.5

SSB-210, Transcript of Sjogren syndrome antigen B, humanhuman

TSL 2

Gene SSB, Length 735 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-210ENST00000474273 KRTAP1-3Q8IUG1 177 aa9.4□□□□□ -0.9
SSB-210ENST00000474273 EFCC1Q9HA90 598 aa9.4□□□□□ -0.9
SSB-210ENST00000474273 JPH1Q9HDC5 661 aaPredicted RBP9.4□□□□□ -0.9
SSB-210ENST00000474273 CLDN10P78369 228 aa9.39□□□□□ -0.91
SSB-210ENST00000474273 TBC1D8BQ0IIM8 1120 aa9.39□□□□□ -0.91
SSB-210ENST00000474273 USP17L3A6NCW0 530 aa9.38□□□□□ -0.91
SSB-210ENST00000474273 USP17L4A6NCW7 530 aa9.38□□□□□ -0.91
SSB-210ENST00000474273 USP17L2Q6R6M4 530 aa9.38□□□□□ -0.91
SSB-210ENST00000474273 USP17L1Q7RTZ2 530 aa9.38□□□□□ -0.91
SSB-210ENST00000474273 HIF1AQ16665 826 aa9.37□□□□□ -0.91
SSB-210ENST00000474273 SHISA2Q6UWI4 295 aa9.37□□□□□ -0.91
SSB-210ENST00000474273 BTLAQ7Z6A9 289 aa9.37□□□□□ -0.91
SSB-210ENST00000474273 LARGE2Q8N3Y3 721 aa9.37□□□□□ -0.91
SSB-210ENST00000474273 NUDT8Q8WV74 236 aa9.37□□□□□ -0.91
SSB-210ENST00000474273 PPP1R12BO60237 982 aaPredicted RBP9.36□□□□□ -0.91
SSB-210ENST00000474273 AFF1P51825 1210 aaKnown RBP9.36□□□□□ -0.91
SSB-210ENST00000474273 ILDR2Q71H61 639 aa9.36□□□□□ -0.91
SSB-210ENST00000474273 ALDH16A1Q8IZ83 802 aa9.36□□□□□ -0.91
SSB-210ENST00000474273 FMR1NBQ8N0W7 255 aaPredicted RBP9.36□□□□□ -0.91
SSB-210ENST00000474273 TP53INP1Q96A56 240 aa9.36□□□□□ -0.91
SSB-210ENST00000474273 KRTAP4-12Q9BQ66 201 aa9.36□□□□□ -0.91
SSB-210ENST00000474273 SSBP4Q9BWG4 385 aaPredicted RBP9.36□□□□□ -0.91
SSB-210ENST00000474273 IGFLR1Q9H665 355 aa9.36□□□□□ -0.91
SSB-210ENST00000474273 PALM3A6NDB9 673 aaPredicted RBP9.35□□□□□ -0.91
SSB-210ENST00000474273 C21orf2O43822 256 aa9.35□□□□□ -0.91
SSB-210ENST00000474273 PSAPL1Q6NUJ1 521 aa9.35□□□□□ -0.91
SSB-210ENST00000474273 SIX5Q8N196 739 aa9.35□□□□□ -0.91
SSB-210ENST00000474273 STAG2Q8N3U4 1231 aa9.35□□□□□ -0.91
SSB-210ENST00000474273 OGFOD1Q8N543 542 aa9.35□□□□□ -0.91
SSB-210ENST00000474273 DNAJB12Q9NXW2 375 aaKnown RBP9.35□□□□□ -0.91
SSB-210ENST00000474273 TSEN2Q8NCE0 465 aaKnown RBP9.34□□□□□ -0.91
SSB-210ENST00000474273 ADAMTS19Q8TE59 1207 aa9.34□□□□□ -0.91
SSB-210ENST00000474273 POM121Q96HA1 1249 aa9.34□□□□□ -0.91
SSB-210ENST00000474273 NAGPAQ9UK23 515 aa9.34□□□□□ -0.91
SSB-210ENST00000474273 USP21Q9UK80 565 aa9.34□□□□□ -0.91
SSB-210ENST00000474273 HYAL3O43820 417 aaPredicted RBP9.33□□□□□ -0.92
SSB-210ENST00000474273 IER5Q5VY09 327 aa9.33□□□□□ -0.92
SSB-210ENST00000474273 UCN2Q96RP3 112 aa9.33□□□□□ -0.92
SSB-210ENST00000474273 C2orf49Q9BVC5 232 aaPredicted RBP9.33□□□□□ -0.92
SSB-210ENST00000474273 GSX2Q9BZM3 304 aa9.33□□□□□ -0.92
SSB-210ENST00000474273 ATP9BO43861 1147 aa9.32□□□□□ -0.92
SSB-210ENST00000474273 RGS9O75916 674 aaPredicted RBP9.32□□□□□ -0.92
SSB-210ENST00000474273 LCE3BQ5TA77 95 aa9.32□□□□□ -0.92
SSB-210ENST00000474273 DMRTC2Q8IXT2 367 aaPredicted RBP9.32□□□□□ -0.92
SSB-210ENST00000474273 PNMA5Q96PV4 448 aa9.32□□□□□ -0.92
SSB-210ENST00000474273 MKRN1Q9UHC7 482 aaKnown RBP9.32□□□□□ -0.92
SSB-210ENST00000474273 GTF3C5Q9Y5Q8 519 aaPredicted RBP9.32□□□□□ -0.92
SSB-210ENST00000474273 POM121CA8CG34 1229 aa9.31□□□□□ -0.92
SSB-210ENST00000474273 DKK1O94907 266 aa9.31□□□□□ -0.92
SSB-210ENST00000474273 GAS2L2Q8NHY3 880 aa9.31□□□□□ -0.92
SSB-210ENST00000474273 RBM19Q9Y4C8 960 aaKnown RBP9.31□□□□□ -0.92
SSB-210ENST00000474273 ATAD2Q6PL18 1390 aa9.31□□□□□ -0.92
SSB-210ENST00000474273 NFKB1P19838 968 aa9.3□□□□□ -0.92
SSB-210ENST00000474273 CCINQ13939 588 aa9.3□□□□□ -0.92
SSB-210ENST00000474273 TMEM132AQ24JP5 1023 aa9.3□□□□□ -0.92
SSB-210ENST00000474273 DTWD1Q8N5C7 304 aa9.3□□□□□ -0.92
SSB-210ENST00000474273 ZNF594Q96JF6 807 aaPredicted RBP9.3□□□□□ -0.92
SSB-210ENST00000474273 RAD21O60216 631 aa9.29□□□□□ -0.92
SSB-210ENST00000474273 MSL1Q68DK7 614 aa9.29□□□□□ -0.92
SSB-210ENST00000474273 TGFBR3LH3BV60 316 aa9.28□□□□□ -0.92
SSB-210ENST00000474273 PCSK7Q16549 785 aa9.28□□□□□ -0.92
SSB-210ENST00000474273 RTN1Q16799 776 aa9.28□□□□□ -0.92
SSB-210ENST00000474273 SCG3Q8WXD2 468 aaKnown RBP9.28□□□□□ -0.92
SSB-210ENST00000474273 NGLY1Q96IV0 654 aa9.28□□□□□ -0.92
SSB-210ENST00000474273 GRIK5Q16478 980 aa9.27□□□□□ -0.93
SSB-210ENST00000474273 HDGFL1Q5TGJ6 251 aa9.27□□□□□ -0.93
SSB-210ENST00000474273 FBXO11Q86XK2 927 aa9.27□□□□□ -0.93
SSB-210ENST00000474273 WFDC12Q8WWY7 111 aa9.27□□□□□ -0.93
SSB-210ENST00000474273 FRRS1LQ9P0K9 344 aa9.27□□□□□ -0.93
SSB-210ENST00000474273 DMGDHQ9UI17 866 aaKnown RBP9.27□□□□□ -0.93
SSB-210ENST00000474273 FAM35AQ86V20 835 aa9.26□□□□□ -0.93
SSB-210ENST00000474273 CHMP7Q8WUX9 453 aaPredicted RBP9.26□□□□□ -0.93
SSB-210ENST00000474273 LPIN3Q9BQK8 851 aa9.26□□□□□ -0.93
SSB-210ENST00000474273 MAP3K6O95382 1288 aa9.25□□□□□ -0.93
SSB-210ENST00000474273 EPB42P16452 691 aa9.25□□□□□ -0.93
SSB-210ENST00000474273 SEC13P55735 322 aa9.25□□□□□ -0.93
SSB-210ENST00000474273 RNF112Q9ULX5 631 aa9.25□□□□□ -0.93
SSB-210ENST00000474273 BCS1LQ9Y276 419 aa9.25□□□□□ -0.93
SSB-210ENST00000474273 CPB1P15086 417 aa9.24□□□□□ -0.93
SSB-210ENST00000474273 GRNP28799 593 aaKnown RBP9.24□□□□□ -0.93
SSB-210ENST00000474273 NOS3P29474 1203 aa9.24□□□□□ -0.93
SSB-210ENST00000474273 IREB2P48200 963 aaKnown RBP9.23□□□□□ -0.93
SSB-210ENST00000474273 PERM1Q5SV97 790 aa9.23□□□□□ -0.93
SSB-210ENST00000474273 WFDC8Q8IUA0 241 aa9.23□□□□□ -0.93
SSB-210ENST00000474273 TTC9Q92623 222 aa9.23□□□□□ -0.93
SSB-210ENST00000474273 RASA1P20936 1047 aa9.22□□□□□ -0.93
SSB-210ENST00000474273 INPP5BP32019 993 aa9.22□□□□□ -0.93
SSB-210ENST00000474273 IGF2-ASQ6U949 168 aa9.22□□□□□ -0.93
SSB-210ENST00000474273 DHX32Q7L7V1 743 aaKnown RBP9.22□□□□□ -0.93
SSB-210ENST00000474273 TRPM4Q8TD43 1214 aa9.22□□□□□ -0.93
SSB-210ENST00000474273 ZBTB42B2RXF5 422 aa9.21□□□□□ -0.94
SSB-210ENST00000474273 ELMSAN1Q6PJG2 1045 aa9.21□□□□□ -0.94
SSB-210ENST00000474273 MEGF10Q96KG7 1140 aa9.21□□□□□ -0.94
SSB-210ENST00000474273 C11orf16Q9NQ32 467 aa9.21□□□□□ -0.94
SSB-210ENST00000474273 ZFATQ9P243 1243 aa9.21□□□□□ -0.94
SSB-210ENST00000474273 UBTFP17480 764 aaKnown RBP9.2□□□□□ -0.94
SSB-210ENST00000474273 IDH3AP50213 366 aa9.2□□□□□ -0.94
SSB-210ENST00000474273 GPLD1P80108 840 aa9.2□□□□□ -0.94
SSB-210ENST00000474273 PLAURQ03405 335 aa9.2□□□□□ -0.94
SSB-210ENST00000474273 IGFBP4P22692 258 aa9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 118.8 ms