RNA–Protein interactions for RNA: ENST00000474237.1

OBSCN-206, Transcript of obscurin, cytoskeletal calmodulin and titin-interacting RhoGEF, humanhuman

TSL 1 (best)

Gene OBSCN, Length 1,877 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
OBSCN-206ENST00000474237 RWDD1Q9H446 243 aaPredicted RBP22.68■■□□□ 1.22
OBSCN-206ENST00000474237 BCL2L12Q9HB09 334 aa22.68■■□□□ 1.22
OBSCN-206ENST00000474237 TFCP2L1Q9NZI6 479 aa22.68■■□□□ 1.22
OBSCN-206ENST00000474237 H7C1W4 665 aa22.67■■□□□ 1.22
OBSCN-206ENST00000474237 HDAC1Q13547 482 aaPredicted RBP22.67■■□□□ 1.22
OBSCN-206ENST00000474237 UBE3BQ7Z3V4 1068 aa22.67■■□□□ 1.22
OBSCN-206ENST00000474237 ANKRD44Q8N8A2 993 aa22.67■■□□□ 1.22
OBSCN-206ENST00000474237 UBN2Q6ZU65 1347 aa22.67■■□□□ 1.22
OBSCN-206ENST00000474237 HDAC5Q9UQL6 1122 aa22.66■■□□□ 1.22
OBSCN-206ENST00000474237 USP42Q9H9J4 1324 aaKnown RBP22.66■■□□□ 1.22
OBSCN-206ENST00000474237 CASP7P55210 303 aa22.66■■□□□ 1.22
OBSCN-206ENST00000474237 SUCLG2Q96I99 432 aa22.66■■□□□ 1.22
OBSCN-206ENST00000474237 RTL5Q5HYW3 569 aaPredicted RBP22.65■■□□□ 1.22
OBSCN-206ENST00000474237 KAZALD1Q96I82 304 aa22.65■■□□□ 1.22
OBSCN-206ENST00000474237 NIP7Q9Y221 180 aaKnown RBP eCLIP22.65■■□□□ 1.22
OBSCN-206ENST00000474237 NUP98P52948 1817 aa22.65■■□□□ 1.22
OBSCN-206ENST00000474237 UBR3Q6ZT12 1888 aa22.64■■□□□ 1.22
OBSCN-206ENST00000474237 ZBTB38Q8NAP3 1195 aaPredicted RBP22.64■■□□□ 1.21
OBSCN-206ENST00000474237 AFDNP55196 1824 aaKnown RBP22.63■■□□□ 1.21
OBSCN-206ENST00000474237 PCCAP05165 728 aaPredicted RBP22.63■■□□□ 1.21
OBSCN-206ENST00000474237 ATP8B2P98198 1209 aa22.63■■□□□ 1.21
OBSCN-206ENST00000474237 PARP10Q53GL7 1025 aa22.62■■□□□ 1.21
OBSCN-206ENST00000474237 TBC1D9BQ66K14 1250 aa22.62■■□□□ 1.21
OBSCN-206ENST00000474237 FAM89AQ96GI7 184 aa22.62■■□□□ 1.21
OBSCN-206ENST00000474237 BICC1Q9H694 974 aaKnown RBP22.62■■□□□ 1.21
OBSCN-206ENST00000474237 BCORQ6W2J9 1755 aa22.62■■□□□ 1.21
OBSCN-206ENST00000474237 SUSD4Q5VX71 490 aa22.62■■□□□ 1.21
OBSCN-206ENST00000474237 ANO8Q9HCE9 1232 aaPredicted RBP22.62■■□□□ 1.21
OBSCN-206ENST00000474237 TRMT112Q9UI30 125 aaKnown RBP22.62■■□□□ 1.21
OBSCN-206ENST00000474237 PNMA6EA0A0J9YXQ4 647 aa22.61■■□□□ 1.21
OBSCN-206ENST00000474237 SCN7AQ01118 1682 aa22.6■■□□□ 1.21
OBSCN-206ENST00000474237 EPHA10Q5JZY3 1008 aa22.6■■□□□ 1.21
OBSCN-206ENST00000474237 BICDL1Q6ZP65 573 aa22.6■■□□□ 1.21
OBSCN-206ENST00000474237 PPP1R42Q7Z4L9 355 aa22.6■■□□□ 1.21
OBSCN-206ENST00000474237 C4AP0C0L4 1744 aa22.6■■□□□ 1.21
OBSCN-206ENST00000474237 MTX1Q13505 466 aa22.6■■□□□ 1.21
OBSCN-206ENST00000474237 SLC15A2Q16348 729 aa22.6■■□□□ 1.21
OBSCN-206ENST00000474237 COL23A1Q86Y22 540 aaPredicted RBP22.6■■□□□ 1.21
OBSCN-206ENST00000474237 SYNE4Q8N205 404 aa22.6■■□□□ 1.21
OBSCN-206ENST00000474237 FLAD1Q8NFF5 587 aa22.6■■□□□ 1.21
OBSCN-206ENST00000474237 ANKRD36CQ5JPF3 1778 aa22.6■■□□□ 1.21
OBSCN-206ENST00000474237 FAM177BA6PVY3 158 aa22.59■■□□□ 1.21
OBSCN-206ENST00000474237 HMMRO75330 724 aa22.59■■□□□ 1.21
OBSCN-206ENST00000474237 GYS1P13807 737 aa22.59■■□□□ 1.21
OBSCN-206ENST00000474237 UTP14AQ9BVJ6 771 aaKnown RBP22.59■■□□□ 1.21
OBSCN-206ENST00000474237 SRGAP3O43295 1099 aa22.58■■□□□ 1.21
OBSCN-206ENST00000474237 SETDB2Q96T68 719 aa22.58■■□□□ 1.21
OBSCN-206ENST00000474237 STK32BQ9NY57 414 aa22.58■■□□□ 1.21
OBSCN-206ENST00000474237 SSH3Q8TE77 659 aa22.58■■□□□ 1.2
OBSCN-206ENST00000474237 PNPLA7Q6ZV29 1317 aa22.57■■□□□ 1.2
OBSCN-206ENST00000474237 NTSR2O95665 410 aa22.57■■□□□ 1.2
OBSCN-206ENST00000474237 FOXO4P98177 505 aa22.57■■□□□ 1.2
OBSCN-206ENST00000474237 RABL6Q3YEC7 729 aaPredicted RBP22.57■■□□□ 1.2
OBSCN-206ENST00000474237 SMC5Q8IY18 1101 aa22.57■■□□□ 1.2
OBSCN-206ENST00000474237 UPF1Q92900 1129 aaKnown RBP eCLIP22.57■■□□□ 1.2
OBSCN-206ENST00000474237 CDHR2Q9BYE9 1310 aa22.57■■□□□ 1.2
OBSCN-206ENST00000474237 PDE4AP27815 886 aa22.56■■□□□ 1.2
OBSCN-206ENST00000474237 POLA2Q14181 598 aa22.56■■□□□ 1.2
OBSCN-206ENST00000474237 MSH5O43196 834 aa22.56■■□□□ 1.2
OBSCN-206ENST00000474237 DCTPP1Q9H773 170 aa22.56■■□□□ 1.2
OBSCN-206ENST00000474237 SH3TC1Q8TE82 1336 aa22.56■■□□□ 1.2
OBSCN-206ENST00000474237 IRS4O14654 1257 aaPredicted RBP22.55■■□□□ 1.2
OBSCN-206ENST00000474237 NFIXQ14938 502 aa22.55■■□□□ 1.2
OBSCN-206ENST00000474237 PLA2G12BQ9BX93 195 aa22.55■■□□□ 1.2
OBSCN-206ENST00000474237 BACH2Q9BYV9 841 aa22.55■■□□□ 1.2
OBSCN-206ENST00000474237 LMBR1LQ6UX01 489 aa22.54■■□□□ 1.2
OBSCN-206ENST00000474237 GCC1Q96CN9 775 aa22.54■■□□□ 1.2
OBSCN-206ENST00000474237 NUTM1Q86Y26 1132 aa22.54■■□□□ 1.2
OBSCN-206ENST00000474237 NBPF5PQ86XG9 351 aaPredicted RBP22.52■■□□□ 1.2
OBSCN-206ENST00000474237 NYXQ9GZU5 481 aa22.51■■□□□ 1.19
OBSCN-206ENST00000474237 TUBGCP6Q96RT7 1819 aa22.51■■□□□ 1.19
OBSCN-206ENST00000474237 PDE8AO60658 829 aa22.51■■□□□ 1.19
OBSCN-206ENST00000474237 HCLS1P14317 486 aaPredicted RBP22.51■■□□□ 1.19
OBSCN-206ENST00000474237 TM4SF1P30408 202 aa22.51■■□□□ 1.19
OBSCN-206ENST00000474237 TPTE2Q6XPS3 522 aa22.51■■□□□ 1.19
OBSCN-206ENST00000474237 CARMIL3Q8ND23 1372 aa22.5■■□□□ 1.19
OBSCN-206ENST00000474237 ANP32AP39687 249 aaKnown RBP22.5■■□□□ 1.19
OBSCN-206ENST00000474237 ERFEQ4G0M1 354 aa22.5■■□□□ 1.19
OBSCN-206ENST00000474237 NLGN1Q8N2Q7 840 aa22.5■■□□□ 1.19
OBSCN-206ENST00000474237 EXOC6BQ9Y2D4 811 aa22.5■■□□□ 1.19
OBSCN-206ENST00000474237 CSF1RP07333 972 aa22.49■■□□□ 1.19
OBSCN-206ENST00000474237 GTF2E1P29083 439 aaPredicted RBP22.49■■□□□ 1.19
OBSCN-206ENST00000474237 CHMP3Q9Y3E7 222 aa22.49■■□□□ 1.19
OBSCN-206ENST00000474237 CTSWP56202 376 aa22.49■■□□□ 1.19
OBSCN-206ENST00000474237 TTLL11Q8NHH1 800 aa22.49■■□□□ 1.19
OBSCN-206ENST00000474237 PDZRN3Q9UPQ7 1066 aa22.49■■□□□ 1.19
OBSCN-206ENST00000474237 SURF6O75683 361 aaKnown RBP22.48■■□□□ 1.19
OBSCN-206ENST00000474237 HSP90B1P14625 803 aaKnown RBP22.48■■□□□ 1.19
OBSCN-206ENST00000474237 SKAP1Q86WV1 359 aa22.48■■□□□ 1.19
OBSCN-206ENST00000474237 PA2G4Q9UQ80 394 aaKnown RBP22.48■■□□□ 1.19
OBSCN-206ENST00000474237 RFX5P48382 616 aaPredicted RBP22.47■■□□□ 1.19
OBSCN-206ENST00000474237 NUCB1Q02818 461 aa22.47■■□□□ 1.19
OBSCN-206ENST00000474237 ANKRD45Q5TZF3 282 aa22.47■■□□□ 1.19
OBSCN-206ENST00000474237 SLC10A5Q5PT55 438 aa22.47■■□□□ 1.19
OBSCN-206ENST00000474237 KLHDC4Q8TBB5 520 aa22.47■■□□□ 1.19
OBSCN-206ENST00000474237 CCDC85AQ96PX6 553 aaPredicted RBP22.47■■□□□ 1.19
OBSCN-206ENST00000474237 NOP58Q9Y2X3 529 aaKnown RBP22.47■■□□□ 1.19
OBSCN-206ENST00000474237 COL24A1Q17RW2 1714 aa22.46■■□□□ 1.19
OBSCN-206ENST00000474237 APBB1O00213 710 aa22.45■■□□□ 1.19
OBSCN-206ENST00000474237 SERPINB2P05120 415 aa22.45■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms