RNA–Protein interactions for RNA: ENST00000474157.1

GPNMB-209, Transcript of glycoprotein nmb, humanhuman

TSL 4

Gene GPNMB, Length 513 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-209ENST00000474157 CTTNBP2Q8WZ74 1663 aa9.28□□□□□ -0.92
GPNMB-209ENST00000474157 BACH1O14867 736 aa9.27□□□□□ -0.93
GPNMB-209ENST00000474157 LETM1O95202 739 aaPredicted RBP9.27□□□□□ -0.93
GPNMB-209ENST00000474157 TIMP2P16035 220 aa9.27□□□□□ -0.93
GPNMB-209ENST00000474157 ESCO1Q5FWF5 840 aa9.27□□□□□ -0.93
GPNMB-209ENST00000474157 TNS4Q8IZW8 715 aa9.27□□□□□ -0.93
GPNMB-209ENST00000474157 NPATQ14207 1427 aa9.27□□□□□ -0.93
GPNMB-209ENST00000474157 CNTLNQ9NXG0 1405 aa9.27□□□□□ -0.93
GPNMB-209ENST00000474157 PLCH2O75038 1416 aa9.26□□□□□ -0.93
GPNMB-209ENST00000474157 SCNN1AP37088 669 aa9.26□□□□□ -0.93
GPNMB-209ENST00000474157 PUS7Q96PZ0 661 aaKnown RBP9.26□□□□□ -0.93
GPNMB-209ENST00000474157 PLA2R1Q13018 1463 aa9.26□□□□□ -0.93
GPNMB-209ENST00000474157 DMTNQ08495 405 aa9.25□□□□□ -0.93
GPNMB-209ENST00000474157 Q6ZVU0 165 aa9.25□□□□□ -0.93
GPNMB-209ENST00000474157 TXNDC2Q86VQ3 553 aa9.25□□□□□ -0.93
GPNMB-209ENST00000474157 KDF1Q8NAX2 398 aaPredicted RBP9.25□□□□□ -0.93
GPNMB-209ENST00000474157 HPS1Q92902 700 aa9.25□□□□□ -0.93
GPNMB-209ENST00000474157 AGBL1Q96MI9 1066 aa9.25□□□□□ -0.93
GPNMB-209ENST00000474157 PLCD4Q9BRC7 762 aa9.25□□□□□ -0.93
GPNMB-209ENST00000474157 GNEQ9Y223 722 aaKnown RBP9.25□□□□□ -0.93
GPNMB-209ENST00000474157 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP9.25□□□□□ -0.93
GPNMB-209ENST00000474157 ZMYM3Q14202 1370 aa9.24□□□□□ -0.93
GPNMB-209ENST00000474157 TCOF1Q13428 1488 aaKnown RBP9.24□□□□□ -0.93
GPNMB-209ENST00000474157 IL2RAP01589 272 aa9.24□□□□□ -0.93
GPNMB-209ENST00000474157 ARID4AP29374 1257 aaPredicted RBP9.24□□□□□ -0.93
GPNMB-209ENST00000474157 WEE1P30291 646 aa9.24□□□□□ -0.93
GPNMB-209ENST00000474157 EPHA4P54764 986 aa9.24□□□□□ -0.93
GPNMB-209ENST00000474157 RELBQ01201 579 aa9.24□□□□□ -0.93
GPNMB-209ENST00000474157 GAS2L2Q8NHY3 880 aa9.24□□□□□ -0.93
GPNMB-209ENST00000474157 C1orf216Q8TAB5 229 aa9.24□□□□□ -0.93
GPNMB-209ENST00000474157 YY1AP1Q9H869 796 aa9.24□□□□□ -0.93
GPNMB-209ENST00000474157 CPS1P31327 1500 aa9.24□□□□□ -0.93
GPNMB-209ENST00000474157 NUP153P49790 1475 aaKnown RBP9.23□□□□□ -0.93
GPNMB-209ENST00000474157 A0A1W2PRU2 124 aa9.23□□□□□ -0.93
GPNMB-209ENST00000474157 PTGIRP43119 386 aa9.23□□□□□ -0.93
GPNMB-209ENST00000474157 FAM193AP78312 1265 aa9.23□□□□□ -0.93
GPNMB-209ENST00000474157 FRAT1Q92837 279 aaPredicted RBP9.23□□□□□ -0.93
GPNMB-209ENST00000474157 CNKSR1Q969H4 720 aa9.23□□□□□ -0.93
GPNMB-209ENST00000474157 SLC4A9Q96Q91 983 aa9.23□□□□□ -0.93
GPNMB-209ENST00000474157 TSPAN10Q9H1Z9 355 aaPredicted RBP9.23□□□□□ -0.93
GPNMB-209ENST00000474157 ZNF518AQ6AHZ1 1483 aa9.22□□□□□ -0.93
GPNMB-209ENST00000474157 SHANK2Q9UPX8 1470 aa9.22□□□□□ -0.93
GPNMB-209ENST00000474157 FKBP5Q13451 457 aaPredicted RBP9.22□□□□□ -0.93
GPNMB-209ENST00000474157 TMCO4Q5TGY1 634 aa9.22□□□□□ -0.93
GPNMB-209ENST00000474157 SCG3Q8WXD2 468 aaKnown RBP9.22□□□□□ -0.93
GPNMB-209ENST00000474157 XAGE2Q96GT9 111 aa9.22□□□□□ -0.93
GPNMB-209ENST00000474157 PURBQ96QR8 312 aaKnown RBP9.22□□□□□ -0.93
GPNMB-209ENST00000474157 ESYT1Q9BSJ8 1104 aa9.22□□□□□ -0.93
GPNMB-209ENST00000474157 MKNK1Q9BUB5 465 aa9.22□□□□□ -0.93
GPNMB-209ENST00000474157 PRXQ9BXM0 1461 aa9.21□□□□□ -0.93
GPNMB-209ENST00000474157 AGLP35573 1532 aa9.21□□□□□ -0.93
GPNMB-209ENST00000474157 C3P01024 1663 aa9.21□□□□□ -0.93
GPNMB-209ENST00000474157 A6NJY4 79 aa9.21□□□□□ -0.94
GPNMB-209ENST00000474157 MEN1O00255 615 aa9.21□□□□□ -0.94
GPNMB-209ENST00000474157 IGFBP4P22692 258 aa9.21□□□□□ -0.94
GPNMB-209ENST00000474157 SERPINB4P48594 390 aa9.21□□□□□ -0.94
GPNMB-209ENST00000474157 SMTNP53814 917 aa9.21□□□□□ -0.94
GPNMB-209ENST00000474157 CLN3Q13286 438 aa9.21□□□□□ -0.94
GPNMB-209ENST00000474157 TLR1Q15399 786 aa9.21□□□□□ -0.94
GPNMB-209ENST00000474157 TAS1R3Q7RTX0 852 aa9.21□□□□□ -0.94
GPNMB-209ENST00000474157 CNPY4Q8N129 248 aa9.21□□□□□ -0.94
GPNMB-209ENST00000474157 MEIOBQ8N635 442 aa9.21□□□□□ -0.94
GPNMB-209ENST00000474157 DNAJC2Q99543 621 aaKnown RBP9.21□□□□□ -0.94
GPNMB-209ENST00000474157 ZNF395Q9H8N7 513 aaPredicted RBP9.21□□□□□ -0.94
GPNMB-209ENST00000474157 RRAGDQ9NQL2 400 aaPredicted RBP9.21□□□□□ -0.94
GPNMB-209ENST00000474157 ISY1Q9ULR0 285 aaKnown RBP9.21□□□□□ -0.94
GPNMB-209ENST00000474157 PDZRN3Q9UPQ7 1066 aa9.21□□□□□ -0.94
GPNMB-209ENST00000474157 RAPGEF6Q8TEU7 1601 aa9.2□□□□□ -0.94
GPNMB-209ENST00000474157 TCERG1O14776 1098 aaKnown RBP9.2□□□□□ -0.94
GPNMB-209ENST00000474157 MTFR1Q15390 333 aa9.2□□□□□ -0.94
GPNMB-209ENST00000474157 TBCELQ5QJ74 424 aa9.2□□□□□ -0.94
GPNMB-209ENST00000474157 SLC9A9Q8IVB4 645 aa9.2□□□□□ -0.94
GPNMB-209ENST00000474157 ZNF830Q96NB3 372 aaPredicted RBP9.2□□□□□ -0.94
GPNMB-209ENST00000474157 SCHIP1Q9P0W5 487 aaPredicted RBP9.2□□□□□ -0.94
GPNMB-209ENST00000474157 MTMR7Q9Y216 660 aa9.2□□□□□ -0.94
GPNMB-209ENST00000474157 ATAD2Q6PL18 1390 aa9.2□□□□□ -0.94
GPNMB-209ENST00000474157 FOXO3O43524 673 aa9.19□□□□□ -0.94
GPNMB-209ENST00000474157 C21orf2O43822 256 aa9.19□□□□□ -0.94
GPNMB-209ENST00000474157 RGS20O76081 388 aa9.19□□□□□ -0.94
GPNMB-209ENST00000474157 FOXK2Q01167 660 aa9.19□□□□□ -0.94
GPNMB-209ENST00000474157 NLRP3Q96P20 1036 aa9.19□□□□□ -0.94
GPNMB-209ENST00000474157 TSPYL1Q9H0U9 437 aa9.19□□□□□ -0.94
GPNMB-209ENST00000474157 HDAC5Q9UQL6 1122 aa9.19□□□□□ -0.94
GPNMB-209ENST00000474157 HRH3Q9Y5N1 445 aa9.19□□□□□ -0.94
GPNMB-209ENST00000474157 USP3Q9Y6I4 520 aa9.19□□□□□ -0.94
GPNMB-209ENST00000474157 CAPN5O15484 640 aaPredicted RBP9.18□□□□□ -0.94
GPNMB-209ENST00000474157 PPP1R12BO60237 982 aaPredicted RBP9.18□□□□□ -0.94
GPNMB-209ENST00000474157 APPP05067 770 aa9.18□□□□□ -0.94
GPNMB-209ENST00000474157 CAPN12Q6ZSI9 719 aa9.18□□□□□ -0.94
GPNMB-209ENST00000474157 SND1Q7KZF4 910 aaKnown RBP eCLIP9.18□□□□□ -0.94
GPNMB-209ENST00000474157 ANKLE2Q86XL3 938 aa9.18□□□□□ -0.94
GPNMB-209ENST00000474157 PSMD1Q99460 953 aa9.18□□□□□ -0.94
GPNMB-209ENST00000474157 REREQ9P2R6 1566 aa9.17□□□□□ -0.94
GPNMB-209ENST00000474157 MLH3Q9UHC1 1453 aa9.17□□□□□ -0.94
GPNMB-209ENST00000474157 CENPCQ03188 943 aa9.17□□□□□ -0.94
GPNMB-209ENST00000474157 NFKBIBQ15653 356 aa9.17□□□□□ -0.94
GPNMB-209ENST00000474157 FHDC1Q9C0D6 1143 aaPredicted RBP9.17□□□□□ -0.94
GPNMB-209ENST00000474157 GEMIN8Q9NWZ8 242 aaKnown RBP9.17□□□□□ -0.94
GPNMB-209ENST00000474157 SEPT3Q9UH03 358 aa9.17□□□□□ -0.94
GPNMB-209ENST00000474157 FAM187AA6NFU0 413 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms