RNA–Protein interactions for RNA: ENST00000474006.1

CCDC93-207, Transcript of coiled-coil domain containing 93, humanhuman

TSL 3

Gene CCDC93, Length 467 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC93-207ENST00000474006 EPAS1Q99814 870 aa9.7□□□□□ -0.86
CCDC93-207ENST00000474006 STK31Q9BXU1 1019 aa9.7□□□□□ -0.86
CCDC93-207ENST00000474006 CHPF2Q9P2E5 772 aa9.7□□□□□ -0.86
CCDC93-207ENST00000474006 DBF4Q9UBU7 674 aaPredicted RBP9.7□□□□□ -0.86
CCDC93-207ENST00000474006 NOB1Q9ULX3 412 aaKnown RBP9.7□□□□□ -0.86
CCDC93-207ENST00000474006 SUPT16HQ9Y5B9 1047 aaKnown RBP9.7□□□□□ -0.86
CCDC93-207ENST00000474006 PHF14O94880 888 aa9.69□□□□□ -0.86
CCDC93-207ENST00000474006 MYL6BP14649 208 aa9.69□□□□□ -0.86
CCDC93-207ENST00000474006 CANXP27824 592 aaKnown RBP9.69□□□□□ -0.86
CCDC93-207ENST00000474006 CRKLP46109 303 aaKnown RBP9.69□□□□□ -0.86
CCDC93-207ENST00000474006 PDE4DQ08499 809 aa9.69□□□□□ -0.86
CCDC93-207ENST00000474006 EZH2Q15910 746 aaKnown RBP9.69□□□□□ -0.86
CCDC93-207ENST00000474006 RC3H1Q5TC82 1133 aaKnown RBP9.69□□□□□ -0.86
CCDC93-207ENST00000474006 KCPQ6ZWJ8 1503 aa9.69□□□□□ -0.86
CCDC93-207ENST00000474006 G2E3Q7L622 706 aa9.69□□□□□ -0.86
CCDC93-207ENST00000474006 DDX21Q9NR30 783 aaKnown RBP eCLIP9.69□□□□□ -0.86
CCDC93-207ENST00000474006 CCDC87Q9NVE4 849 aa9.69□□□□□ -0.86
CCDC93-207ENST00000474006 HYPKQ9NX55 129 aa9.69□□□□□ -0.86
CCDC93-207ENST00000474006 SCN11AQ9UI33 1791 aa9.69□□□□□ -0.86
CCDC93-207ENST00000474006 PCDHGA4Q9Y5G9 962 aa9.69□□□□□ -0.86
CCDC93-207ENST00000474006 TOGARAM1Q9Y4F4 1720 aa9.68□□□□□ -0.86
CCDC93-207ENST00000474006 IRF6O14896 467 aa9.68□□□□□ -0.86
CCDC93-207ENST00000474006 PLIN1O60240 522 aa9.68□□□□□ -0.86
CCDC93-207ENST00000474006 HMGB2P26583 209 aaKnown RBP9.68□□□□□ -0.86
CCDC93-207ENST00000474006 BAG6P46379 1132 aa9.68□□□□□ -0.86
CCDC93-207ENST00000474006 PTGDRQ13258 359 aa9.68□□□□□ -0.86
CCDC93-207ENST00000474006 DEFB132Q7Z7B7 95 aa9.68□□□□□ -0.86
CCDC93-207ENST00000474006 FRAT1Q92837 279 aaPredicted RBP9.68□□□□□ -0.86
CCDC93-207ENST00000474006 PHAXQ9H814 394 aaKnown RBP9.68□□□□□ -0.86
CCDC93-207ENST00000474006 ERBB4Q15303 1308 aa9.67□□□□□ -0.86
CCDC93-207ENST00000474006 IPO8O15397 1037 aaKnown RBP9.67□□□□□ -0.86
CCDC93-207ENST00000474006 AIMP1Q12904 312 aaKnown RBP9.67□□□□□ -0.86
CCDC93-207ENST00000474006 COPS6Q7L5N1 327 aa9.67□□□□□ -0.86
CCDC93-207ENST00000474006 LRP10Q7Z4F1 713 aa9.67□□□□□ -0.86
CCDC93-207ENST00000474006 XAGE3Q8WTP9 111 aa9.67□□□□□ -0.86
CCDC93-207ENST00000474006 CCDC102AQ96A19 550 aa9.67□□□□□ -0.86
CCDC93-207ENST00000474006 KDM4CQ9H3R0 1056 aa9.67□□□□□ -0.86
CCDC93-207ENST00000474006 GPBP1L1Q9HC44 474 aaPredicted RBP9.67□□□□□ -0.86
CCDC93-207ENST00000474006 ZBTB1Q9Y2K1 713 aa9.67□□□□□ -0.86
CCDC93-207ENST00000474006 BRWD3Q6RI45 1802 aa9.67□□□□□ -0.86
CCDC93-207ENST00000474006 RPS6KA4O75676 772 aa9.66□□□□□ -0.86
CCDC93-207ENST00000474006 IL6STP40189 918 aaPredicted RBP9.66□□□□□ -0.86
CCDC93-207ENST00000474006 EIF5P55010 431 aaKnown RBP9.66□□□□□ -0.86
CCDC93-207ENST00000474006 FLIIQ13045 1269 aa9.66□□□□□ -0.86
CCDC93-207ENST00000474006 SMIM5Q71RC9 77 aa9.66□□□□□ -0.86
CCDC93-207ENST00000474006 ARHGAP45Q92619 1136 aa9.66□□□□□ -0.86
CCDC93-207ENST00000474006 ARXQ96QS3 562 aa9.66□□□□□ -0.86
CCDC93-207ENST00000474006 ZNF330Q9Y3S2 320 aaPredicted RBP9.66□□□□□ -0.86
CCDC93-207ENST00000474006 CNTNAP4Q9C0A0 1308 aa9.65□□□□□ -0.86
CCDC93-207ENST00000474006 AMHR2Q16671 573 aa9.65□□□□□ -0.86
CCDC93-207ENST00000474006 ZKSCAN2Q63HK3 967 aa9.65□□□□□ -0.86
CCDC93-207ENST00000474006 TTLL7Q6ZT98 887 aa9.65□□□□□ -0.86
CCDC93-207ENST00000474006 ANKRD13DQ6ZTN6 518 aa9.65□□□□□ -0.86
CCDC93-207ENST00000474006 NPM2Q86SE8 214 aaKnown RBP9.65□□□□□ -0.86
CCDC93-207ENST00000474006 GOLGA6L2Q8N9W4 650 aaPredicted RBP9.65□□□□□ -0.86
CCDC93-207ENST00000474006 RTCBQ9Y3I0 505 aaKnown RBP9.65□□□□□ -0.86
CCDC93-207ENST00000474006 SIPA1L3O60292 1781 aaPredicted RBP9.65□□□□□ -0.87
CCDC93-207ENST00000474006 DOT1LQ8TEK3 1739 aa9.65□□□□□ -0.87
CCDC93-207ENST00000474006 RNF123Q5XPI4 1314 aa9.64□□□□□ -0.87
CCDC93-207ENST00000474006 KIF16BQ96L93 1317 aa9.64□□□□□ -0.87
CCDC93-207ENST00000474006 PI4KAP2A4QPH2 592 aa9.64□□□□□ -0.87
CCDC93-207ENST00000474006 DDX58O95786 925 aaKnown RBP9.64□□□□□ -0.87
CCDC93-207ENST00000474006 TRIM27P14373 513 aa9.64□□□□□ -0.87
CCDC93-207ENST00000474006 RRP1P56182 461 aaKnown RBP9.64□□□□□ -0.87
CCDC93-207ENST00000474006 FKBP5Q13451 457 aaPredicted RBP9.64□□□□□ -0.87
CCDC93-207ENST00000474006 TRAPPC3LQ5T215 181 aa9.64□□□□□ -0.87
CCDC93-207ENST00000474006 KSR2Q6VAB6 950 aa9.64□□□□□ -0.87
CCDC93-207ENST00000474006 ATF7IPQ6VMQ6 1270 aa9.64□□□□□ -0.87
CCDC93-207ENST00000474006 PI4KAP1Q8N8J0 262 aa9.64□□□□□ -0.87
CCDC93-207ENST00000474006 API5Q9BZZ5 524 aaKnown RBP9.64□□□□□ -0.87
CCDC93-207ENST00000474006 TBC1D2BQ9UPU7 963 aa9.64□□□□□ -0.87
CCDC93-207ENST00000474006 TNNQ9UQP3 1299 aa9.64□□□□□ -0.87
CCDC93-207ENST00000474006 PCDHGA10Q9Y5H3 936 aa9.64□□□□□ -0.87
CCDC93-207ENST00000474006 EP400Q96L91 3159 aa9.64□□□□□ -0.87
CCDC93-207ENST00000474006 NHSQ6T4R5 1651 aa9.64□□□□□ -0.87
CCDC93-207ENST00000474006 PTPRCP08575 1304 aa9.63□□□□□ -0.87
CCDC93-207ENST00000474006 A0A087WZG4 1122 aa9.63□□□□□ -0.87
CCDC93-207ENST00000474006 F6X3S4 739 aa9.63□□□□□ -0.87
CCDC93-207ENST00000474006 C20orf194Q5TEA3 1177 aa9.63□□□□□ -0.87
CCDC93-207ENST00000474006 TYW1BQ6NUM6 668 aa9.63□□□□□ -0.87
CCDC93-207ENST00000474006 RIC3Q7Z5B4 369 aa9.63□□□□□ -0.87
CCDC93-207ENST00000474006 AMIGO3Q86WK7 504 aa9.63□□□□□ -0.87
CCDC93-207ENST00000474006 SLAIN1Q8ND83 568 aa9.63□□□□□ -0.87
CCDC93-207ENST00000474006 FBXW7Q969H0 707 aa9.63□□□□□ -0.87
CCDC93-207ENST00000474006 CLUAP1Q96AJ1 413 aa9.63□□□□□ -0.87
CCDC93-207ENST00000474006 TFCP2L1Q9NZI6 479 aa9.63□□□□□ -0.87
CCDC93-207ENST00000474006 ITGB4P16144 1822 aa9.63□□□□□ -0.87
CCDC93-207ENST00000474006 KDM3BQ7LBC6 1761 aa9.63□□□□□ -0.87
CCDC93-207ENST00000474006 ERVV-1B6SEH8 477 aa9.62□□□□□ -0.87
CCDC93-207ENST00000474006 MS4A1P11836 297 aa9.62□□□□□ -0.87
CCDC93-207ENST00000474006 FECHP22830 423 aa9.62□□□□□ -0.87
CCDC93-207ENST00000474006 PDE3AQ14432 1141 aa9.62□□□□□ -0.87
CCDC93-207ENST00000474006 SLC15A2Q16348 729 aa9.62□□□□□ -0.87
CCDC93-207ENST00000474006 HLFQ16534 295 aa9.62□□□□□ -0.87
CCDC93-207ENST00000474006 ZNF827Q17R98 1081 aa9.62□□□□□ -0.87
CCDC93-207ENST00000474006 SLC4A10Q6U841 1118 aa9.62□□□□□ -0.87
CCDC93-207ENST00000474006 KIF6Q6ZMV9 814 aa9.62□□□□□ -0.87
CCDC93-207ENST00000474006 DZIP3Q86Y13 1208 aaKnown RBP9.62□□□□□ -0.87
CCDC93-207ENST00000474006 DZIP1LQ8IYY4 767 aaKnown RBP9.62□□□□□ -0.87
CCDC93-207ENST00000474006 PLBD2Q8NHP8 589 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms