RNA–Protein interactions for RNA: ENST00000473684.5

TMEM39A-206, Transcript of transmembrane protein 39A, humanhuman

TSL 5

Gene TMEM39A, Length 3,043 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-206ENST00000473684 MCM4P33991 863 aa6.37□□□□□ -1.39
TMEM39A-206ENST00000473684 RALBP1Q15311 655 aa6.37□□□□□ -1.39
TMEM39A-206ENST00000473684 SEPT3Q9UH03 358 aa6.37□□□□□ -1.39
TMEM39A-206ENST00000473684 ITSN2Q9NZM3 1697 aa6.37□□□□□ -1.39
TMEM39A-206ENST00000473684 CCNB3Q8WWL7 1395 aa6.37□□□□□ -1.39
TMEM39A-206ENST00000473684 LILRA1O75019 489 aa6.36□□□□□ -1.39
TMEM39A-206ENST00000473684 ADH1CP00326 375 aa6.36□□□□□ -1.39
TMEM39A-206ENST00000473684 ZNF211Q13398 564 aaPredicted RBP6.36□□□□□ -1.39
TMEM39A-206ENST00000473684 CAPN12Q6ZSI9 719 aa6.36□□□□□ -1.39
TMEM39A-206ENST00000473684 EXOC6Q8TAG9 804 aa6.36□□□□□ -1.39
TMEM39A-206ENST00000473684 GTF3C2Q8WUA4 911 aaPredicted RBP6.36□□□□□ -1.39
TMEM39A-206ENST00000473684 COL26A1Q96A83 441 aa6.36□□□□□ -1.39
TMEM39A-206ENST00000473684 ANTXR1Q9H6X2 564 aa6.36□□□□□ -1.39
TMEM39A-206ENST00000473684 BIN2Q9UBW5 565 aaPredicted RBP6.36□□□□□ -1.39
TMEM39A-206ENST00000473684 CCDC66A2RUB6 948 aa6.36□□□□□ -1.39
TMEM39A-206ENST00000473684 INHAP05111 366 aa6.36□□□□□ -1.39
TMEM39A-206ENST00000473684 IGFBP4P22692 258 aa6.36□□□□□ -1.39
TMEM39A-206ENST00000473684 EPHA4P54764 986 aa6.36□□□□□ -1.39
TMEM39A-206ENST00000473684 MARSP56192 900 aaKnown RBP6.36□□□□□ -1.39
TMEM39A-206ENST00000473684 MKNK1Q9BUB5 465 aa6.36□□□□□ -1.39
TMEM39A-206ENST00000473684 HIRIP3Q9BW71 556 aaPredicted RBP6.36□□□□□ -1.39
TMEM39A-206ENST00000473684 BACH1O14867 736 aa6.36□□□□□ -1.39
TMEM39A-206ENST00000473684 PTCD1O75127 700 aaKnown RBP6.36□□□□□ -1.39
TMEM39A-206ENST00000473684 MCCP23508 829 aa6.36□□□□□ -1.39
TMEM39A-206ENST00000473684 MCM5P33992 734 aa6.36□□□□□ -1.39
TMEM39A-206ENST00000473684 ECM1Q16610 540 aa6.36□□□□□ -1.39
TMEM39A-206ENST00000473684 NBPF1Q3BBV0 1214 aa6.36□□□□□ -1.39
TMEM39A-206ENST00000473684 C8orf34Q49A92 452 aa6.36□□□□□ -1.39
TMEM39A-206ENST00000473684 CCDC116Q8IYX3 515 aa6.36□□□□□ -1.39
TMEM39A-206ENST00000473684 CHMP7Q8WUX9 453 aaPredicted RBP6.36□□□□□ -1.39
TMEM39A-206ENST00000473684 ETNK1Q9HBU6 452 aa6.36□□□□□ -1.39
TMEM39A-206ENST00000473684 ANO2Q9NQ90 1003 aa6.36□□□□□ -1.39
TMEM39A-206ENST00000473684 SETD5Q9C0A6 1442 aa6.35□□□□□ -1.39
TMEM39A-206ENST00000473684 H3BRB1 525 aa6.35□□□□□ -1.39
TMEM39A-206ENST00000473684 NR5A1Q13285 461 aa6.35□□□□□ -1.39
TMEM39A-206ENST00000473684 CCDC184Q52MB2 194 aa6.35□□□□□ -1.39
TMEM39A-206ENST00000473684 PPP1R26Q5T8A7 1209 aaPredicted RBP6.35□□□□□ -1.39
TMEM39A-206ENST00000473684 SPNS2Q8IVW8 549 aa6.35□□□□□ -1.39
TMEM39A-206ENST00000473684 TNS4Q8IZW8 715 aa6.35□□□□□ -1.39
TMEM39A-206ENST00000473684 CEP120Q8N960 986 aa6.35□□□□□ -1.39
TMEM39A-206ENST00000473684 GAS2L2Q8NHY3 880 aa6.35□□□□□ -1.39
TMEM39A-206ENST00000473684 TMC1Q8TDI8 760 aa6.35□□□□□ -1.39
TMEM39A-206ENST00000473684 SLC4A9Q96Q91 983 aa6.35□□□□□ -1.39
TMEM39A-206ENST00000473684 TUT1Q9H6E5 874 aaKnown RBP6.35□□□□□ -1.39
TMEM39A-206ENST00000473684 SLC52A1Q9NWF4 448 aa6.35□□□□□ -1.39
TMEM39A-206ENST00000473684 DNMT3AQ9Y6K1 912 aaPredicted RBP6.35□□□□□ -1.39
TMEM39A-206ENST00000473684 NINLQ9Y2I6 1382 aa6.35□□□□□ -1.39
TMEM39A-206ENST00000473684 RBM47A0AV96 593 aaKnown RBP6.35□□□□□ -1.39
TMEM39A-206ENST00000473684 E9PSI1 815 aa6.35□□□□□ -1.39
TMEM39A-206ENST00000473684 WNT7AO00755 349 aa6.35□□□□□ -1.39
TMEM39A-206ENST00000473684 CC2D1BQ5T0F9 858 aaKnown RBP6.35□□□□□ -1.39
TMEM39A-206ENST00000473684 TICAM2Q86XR7 235 aa6.35□□□□□ -1.39
TMEM39A-206ENST00000473684 IGF1RP08069 1367 aa6.35□□□□□ -1.39
TMEM39A-206ENST00000473684 FOXO3O43524 673 aa6.34□□□□□ -1.39
TMEM39A-206ENST00000473684 C21orf2O43822 256 aa6.34□□□□□ -1.39
TMEM39A-206ENST00000473684 RAPGEF2Q9Y4G8 1499 aa6.34□□□□□ -1.39
TMEM39A-206ENST00000473684 GNRH1P01148 92 aa6.34□□□□□ -1.39
TMEM39A-206ENST00000473684 NR3C2P08235 984 aa6.34□□□□□ -1.39
TMEM39A-206ENST00000473684 CYP2U1Q7Z449 544 aa6.34□□□□□ -1.39
TMEM39A-206ENST00000473684 EFCC1Q9HA90 598 aa6.34□□□□□ -1.39
TMEM39A-206ENST00000473684 VIRMAQ69YN4 1812 aaKnown RBP6.34□□□□□ -1.4
TMEM39A-206ENST00000473684 POLR1AO95602 1720 aaPredicted RBP6.34□□□□□ -1.4
TMEM39A-206ENST00000473684 PRXQ9BXM0 1461 aa6.34□□□□□ -1.4
TMEM39A-206ENST00000473684 SCAPERQ9BY12 1400 aa6.34□□□□□ -1.4
TMEM39A-206ENST00000473684 ADD1P35611 737 aaKnown RBP6.33□□□□□ -1.4
TMEM39A-206ENST00000473684 GLYCTKQ8IVS8 523 aa6.33□□□□□ -1.4
TMEM39A-206ENST00000473684 SCG3Q8WXD2 468 aaKnown RBP6.33□□□□□ -1.4
TMEM39A-206ENST00000473684 MRGPRX2Q96LB1 330 aa6.33□□□□□ -1.4
TMEM39A-206ENST00000473684 SERTAD1Q9UHV2 236 aa6.33□□□□□ -1.4
TMEM39A-206ENST00000473684 ATAD2Q6PL18 1390 aa6.33□□□□□ -1.4
TMEM39A-206ENST00000473684 KCNJ4P48050 445 aa6.33□□□□□ -1.4
TMEM39A-206ENST00000473684 GABPB1Q06547 395 aaPredicted RBP6.33□□□□□ -1.4
TMEM39A-206ENST00000473684 SF3B2Q13435 895 aaKnown RBP6.33□□□□□ -1.4
TMEM39A-206ENST00000473684 TIGD1Q96MW7 591 aa6.33□□□□□ -1.4
TMEM39A-206ENST00000473684 TSPAN10Q9H1Z9 355 aaPredicted RBP6.33□□□□□ -1.4
TMEM39A-206ENST00000473684 NOL7Q9UMY1 257 aaKnown RBP6.33□□□□□ -1.4
TMEM39A-206ENST00000473684 KIF3AQ9Y496 699 aa6.33□□□□□ -1.4
TMEM39A-206ENST00000473684 PTPRTO14522 1441 aa6.33□□□□□ -1.4
TMEM39A-206ENST00000473684 TONSLQ96HA7 1378 aa6.33□□□□□ -1.4
TMEM39A-206ENST00000473684 SIGLEC1Q9BZZ2 1709 aa6.33□□□□□ -1.4
TMEM39A-206ENST00000473684 CBX1P83916 185 aa6.33□□□□□ -1.4
TMEM39A-206ENST00000473684 FKBP4Q02790 459 aaKnown RBP eCLIP6.33□□□□□ -1.4
TMEM39A-206ENST00000473684 CYB5RLQ6IPT4 315 aa6.33□□□□□ -1.4
TMEM39A-206ENST00000473684 CENPQQ7L2Z9 268 aaPredicted RBP6.33□□□□□ -1.4
TMEM39A-206ENST00000473684 MADDQ8WXG6 1647 aa6.33□□□□□ -1.4
TMEM39A-206ENST00000473684 SETD1BQ9UPS6 1966 aaKnown RBP6.33□□□□□ -1.4
TMEM39A-206ENST00000473684 ZC3H13Q5T200 1668 aaKnown RBP6.32□□□□□ -1.4
TMEM39A-206ENST00000473684 ADGBQ8N7X0 1667 aa6.32□□□□□ -1.4
TMEM39A-206ENST00000473684 DEPDC5O75140 1603 aa6.32□□□□□ -1.4
TMEM39A-206ENST00000473684 UNCXA6NJT0 531 aa6.32□□□□□ -1.4
TMEM39A-206ENST00000473684 TULP2O00295 520 aa6.32□□□□□ -1.4
TMEM39A-206ENST00000473684 FOXK2Q01167 660 aa6.32□□□□□ -1.4
TMEM39A-206ENST00000473684 SYNMO15061 1565 aa6.32□□□□□ -1.4
TMEM39A-206ENST00000473684 SLC19A1P41440 591 aa6.32□□□□□ -1.4
TMEM39A-206ENST00000473684 ARHGAP4P98171 946 aa6.32□□□□□ -1.4
TMEM39A-206ENST00000473684 MTMR3Q13615 1198 aa6.32□□□□□ -1.4
TMEM39A-206ENST00000473684 NAA30Q147X3 362 aaPredicted RBP6.32□□□□□ -1.4
TMEM39A-206ENST00000473684 ZNF771Q7L3S4 317 aaPredicted RBP6.32□□□□□ -1.4
TMEM39A-206ENST00000473684 HELQQ8TDG4 1101 aa6.32□□□□□ -1.4
TMEM39A-206ENST00000473684 GTF3C5Q9Y5Q8 519 aaPredicted RBP6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms