RNA–Protein interactions for RNA: ENST00000473371.1

NHLRC3-204, Transcript of NHL repeat containing 3, humanhuman

TSL 2

Gene NHLRC3, Length 3,237 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC3-204ENST00000473371 PDCL2Q8N4E4 241 aa16.92■□□□□ 0.3
NHLRC3-204ENST00000473371 TNMDQ9H2S6 317 aa16.92■□□□□ 0.3
NHLRC3-204ENST00000473371 PSMA5P28066 241 aa16.92■□□□□ 0.3
NHLRC3-204ENST00000473371 LUZP1Q86V48 1076 aa16.92■□□□□ 0.3
NHLRC3-204ENST00000473371 DRC7Q8IY82 874 aa16.92■□□□□ 0.3
NHLRC3-204ENST00000473371 PDIA4P13667 645 aaKnown RBP16.92■□□□□ 0.3
NHLRC3-204ENST00000473371 CKAP2LQ8IYA6 745 aa16.92■□□□□ 0.3
NHLRC3-204ENST00000473371 HOXB7P09629 217 aa16.91■□□□□ 0.3
NHLRC3-204ENST00000473371 MTX1Q13505 466 aa16.91■□□□□ 0.3
NHLRC3-204ENST00000473371 FAM227BQ96M60 508 aa16.91■□□□□ 0.3
NHLRC3-204ENST00000473371 LGR6Q9HBX8 967 aa16.91■□□□□ 0.3
NHLRC3-204ENST00000473371 ELP1O95163 1332 aa16.91■□□□□ 0.3
NHLRC3-204ENST00000473371 KCNQ3O43525 872 aa16.91■□□□□ 0.3
NHLRC3-204ENST00000473371 NMIQ13287 307 aaPredicted RBP16.91■□□□□ 0.3
NHLRC3-204ENST00000473371 RGPD8O14715 1765 aaPredicted RBP16.91■□□□□ 0.3
NHLRC3-204ENST00000473371 DACT1Q9NYF0 836 aa16.91■□□□□ 0.3
NHLRC3-204ENST00000473371 ADCY9O60503 1353 aa16.9■□□□□ 0.3
NHLRC3-204ENST00000473371 HIP1O00291 1037 aa16.9■□□□□ 0.3
NHLRC3-204ENST00000473371 SLC27A2O14975 620 aa16.9■□□□□ 0.3
NHLRC3-204ENST00000473371 ANO6Q4KMQ2 910 aa16.9■□□□□ 0.3
NHLRC3-204ENST00000473371 C14orf37Q86TY3 774 aa16.9■□□□□ 0.3
NHLRC3-204ENST00000473371 ABTB2Q8N961 1025 aa16.9■□□□□ 0.3
NHLRC3-204ENST00000473371 MAP4K1Q92918 833 aa16.9■□□□□ 0.3
NHLRC3-204ENST00000473371 SPATA32Q96LK8 384 aa16.9■□□□□ 0.3
NHLRC3-204ENST00000473371 TFIP11Q9UBB9 837 aaKnown RBP16.9■□□□□ 0.3
NHLRC3-204ENST00000473371 DMTNQ08495 405 aa16.9■□□□□ 0.3
NHLRC3-204ENST00000473371 ATP2B3Q16720 1220 aa16.9■□□□□ 0.3
NHLRC3-204ENST00000473371 BLOC1S2Q6QNY1 142 aa16.9■□□□□ 0.3
NHLRC3-204ENST00000473371 CCDC186Q7Z3E2 898 aa16.9■□□□□ 0.3
NHLRC3-204ENST00000473371 TCEANC2Q96MN5 208 aa16.9■□□□□ 0.3
NHLRC3-204ENST00000473371 SCAND2PQ9GZW5 306 aaPredicted RBP16.89■□□□□ 0.29
NHLRC3-204ENST00000473371 CBX8Q9HC52 389 aa16.89■□□□□ 0.29
NHLRC3-204ENST00000473371 CEMIPQ8WUJ3 1361 aa16.89■□□□□ 0.29
NHLRC3-204ENST00000473371 TEFQ10587 303 aa16.89■□□□□ 0.29
NHLRC3-204ENST00000473371 ANKRD1Q15327 319 aa16.89■□□□□ 0.29
NHLRC3-204ENST00000473371 MAP3K2Q9Y2U5 619 aa16.89■□□□□ 0.29
NHLRC3-204ENST00000473371 EID1Q9Y6B2 187 aa16.89■□□□□ 0.29
NHLRC3-204ENST00000473371 ZSCAN20P17040 1043 aaPredicted RBP16.89■□□□□ 0.29
NHLRC3-204ENST00000473371 RNF20Q5VTR2 975 aa16.89■□□□□ 0.29
NHLRC3-204ENST00000473371 TRIM5Q9C035 493 aa16.89■□□□□ 0.29
NHLRC3-204ENST00000473371 UTP14CQ5TAP6 766 aaKnown RBP16.88■□□□□ 0.29
NHLRC3-204ENST00000473371 DDX19AQ9NUU7 478 aaKnown RBP16.88■□□□□ 0.29
NHLRC3-204ENST00000473371 ZHX1Q9UKY1 873 aaPredicted RBP16.88■□□□□ 0.29
NHLRC3-204ENST00000473371 DIP2AQ14689 1571 aa16.88■□□□□ 0.29
NHLRC3-204ENST00000473371 BTBD11A6QL63 1104 aa16.88■□□□□ 0.29
NHLRC3-204ENST00000473371 COL9A3Q14050 684 aaPredicted RBP16.88■□□□□ 0.29
NHLRC3-204ENST00000473371 HDAC5Q9UQL6 1122 aa16.88■□□□□ 0.29
NHLRC3-204ENST00000473371 ALDH1L1O75891 902 aa16.87■□□□□ 0.29
NHLRC3-204ENST00000473371 LARP1Q6PKG0 1096 aaKnown RBP16.87■□□□□ 0.29
NHLRC3-204ENST00000473371 CCDC8Q9H0W5 538 aaPredicted RBP16.87■□□□□ 0.29
NHLRC3-204ENST00000473371 STK3Q13188 491 aa16.87■□□□□ 0.29
NHLRC3-204ENST00000473371 G3BP1Q13283 466 aaKnown RBP eCLIP16.87■□□□□ 0.29
NHLRC3-204ENST00000473371 FSD1Q9BTV5 496 aa16.87■□□□□ 0.29
NHLRC3-204ENST00000473371 DBF4Q9UBU7 674 aaPredicted RBP16.87■□□□□ 0.29
NHLRC3-204ENST00000473371 NPHP3Q7Z494 1330 aa16.87■□□□□ 0.29
NHLRC3-204ENST00000473371 SPDYE4A6NLX3 237 aa16.87■□□□□ 0.29
NHLRC3-204ENST00000473371 LRMPQ12912 555 aa16.87■□□□□ 0.29
NHLRC3-204ENST00000473371 RPS6KB1P23443 525 aa16.86■□□□□ 0.29
NHLRC3-204ENST00000473371 ZNF75DP51815 510 aa16.86■□□□□ 0.29
NHLRC3-204ENST00000473371 CWF19L2Q2TBE0 894 aaKnown RBP16.86■□□□□ 0.29
NHLRC3-204ENST00000473371 BICD2Q8TD16 824 aa16.86■□□□□ 0.29
NHLRC3-204ENST00000473371 LEO1Q8WVC0 666 aaPredicted RBP16.86■□□□□ 0.29
NHLRC3-204ENST00000473371 ANKRD7Q92527 254 aa16.86■□□□□ 0.29
NHLRC3-204ENST00000473371 CLSTN2Q9H4D0 955 aa16.86■□□□□ 0.29
NHLRC3-204ENST00000473371 A0A0D9SFI3 127 aa16.86■□□□□ 0.29
NHLRC3-204ENST00000473371 CTIFO43310 598 aaKnown RBP16.86■□□□□ 0.29
NHLRC3-204ENST00000473371 EAF2Q96CJ1 260 aaPredicted RBP16.86■□□□□ 0.29
NHLRC3-204ENST00000473371 NRBP1Q9UHY1 535 aa16.86■□□□□ 0.29
NHLRC3-204ENST00000473371 CHD2O14647 1828 aaKnown RBP16.86■□□□□ 0.29
NHLRC3-204ENST00000473371 BOLA2Q9H3K6 86 aa16.85■□□□□ 0.29
NHLRC3-204ENST00000473371 C16orf45Q96MC5 204 aaPredicted RBP16.85■□□□□ 0.29
NHLRC3-204ENST00000473371 SLIT1O75093 1534 aa16.85■□□□□ 0.29
NHLRC3-204ENST00000473371 KSR2Q6VAB6 950 aa16.85■□□□□ 0.29
NHLRC3-204ENST00000473371 SASH1O94885 1247 aa16.84■□□□□ 0.29
NHLRC3-204ENST00000473371 U2AF2P26368 475 aaKnown RBP eCLIP16.84■□□□□ 0.29
NHLRC3-204ENST00000473371 TOB2Q14106 344 aaPredicted RBP16.84■□□□□ 0.29
NHLRC3-204ENST00000473371 ZNF165P49910 485 aa16.84■□□□□ 0.29
NHLRC3-204ENST00000473371 NBPF6Q5VWK0 638 aa16.84■□□□□ 0.29
NHLRC3-204ENST00000473371 ZNF530Q6P9A1 599 aaPredicted RBP16.84■□□□□ 0.29
NHLRC3-204ENST00000473371 MPRIPQ6WCQ1 1025 aa16.84■□□□□ 0.29
NHLRC3-204ENST00000473371 PLA2G4DQ86XP0 818 aa16.84■□□□□ 0.29
NHLRC3-204ENST00000473371 TDRD7Q8NHU6 1098 aaKnown RBP16.84■□□□□ 0.29
NHLRC3-204ENST00000473371 NBPF4Q96M43 638 aa16.84■□□□□ 0.29
NHLRC3-204ENST00000473371 TAF6LQ9Y6J9 622 aa16.84■□□□□ 0.29
NHLRC3-204ENST00000473371 ZSCAN25Q6NSZ9 544 aa16.83■□□□□ 0.29
NHLRC3-204ENST00000473371 ARHGAP30Q7Z6I6 1101 aaPredicted RBP16.83■□□□□ 0.29
NHLRC3-204ENST00000473371 DNAJC25Q9H1X3 360 aa16.83■□□□□ 0.29
NHLRC3-204ENST00000473371 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.83■□□□□ 0.29
NHLRC3-204ENST00000473371 NR1I2O75469 434 aa16.83■□□□□ 0.28
NHLRC3-204ENST00000473371 PROSER3Q2NL68 480 aa16.83■□□□□ 0.28
NHLRC3-204ENST00000473371 RBM43Q6ZSC3 357 aaKnown RBP16.83■□□□□ 0.28
NHLRC3-204ENST00000473371 SUCLG2Q96I99 432 aa16.83■□□□□ 0.28
NHLRC3-204ENST00000473371 GTPBP4Q9BZE4 634 aaKnown RBP16.83■□□□□ 0.28
NHLRC3-204ENST00000473371 TLR7Q9NYK1 1049 aaKnown RBP16.83■□□□□ 0.28
NHLRC3-204ENST00000473371 TBX22Q9Y458 520 aa16.83■□□□□ 0.28
NHLRC3-204ENST00000473371 TNNT1P13805 278 aa16.83■□□□□ 0.28
NHLRC3-204ENST00000473371 SIL1Q9H173 461 aa16.83■□□□□ 0.28
NHLRC3-204ENST00000473371 ALDH8A1Q9H2A2 487 aaPredicted RBP16.83■□□□□ 0.28
NHLRC3-204ENST00000473371 SNRKQ9NRH2 765 aa16.83■□□□□ 0.28
NHLRC3-204ENST00000473371 KDM3BQ7LBC6 1761 aa16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms