RNA–Protein interactions for RNA: ENST00000473334.1

PTP4A1-203, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

TSL 3

Gene PTP4A1, Length 638 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-203ENST00000473334 UTP14AQ9BVJ6 771 aaKnown RBP29.18■■■□□ 2.26
PTP4A1-203ENST00000473334 ALDH1B1P30837 517 aa29.17■■■□□ 2.26
PTP4A1-203ENST00000473334 PLBD2Q8NHP8 589 aa29.17■■■□□ 2.26
PTP4A1-203ENST00000473334 IL16Q14005 1332 aa29.17■■■□□ 2.26
PTP4A1-203ENST00000473334 RNF123Q5XPI4 1314 aa29.17■■■□□ 2.26
PTP4A1-203ENST00000473334 LTBP3Q9NS15 1303 aa29.17■■■□□ 2.26
PTP4A1-203ENST00000473334 DICER1Q9UPY3 1922 aaKnown RBP29.16■■■□□ 2.26
PTP4A1-203ENST00000473334 ANKRD13DQ6ZTN6 518 aa29.16■■■□□ 2.26
PTP4A1-203ENST00000473334 NLRP10Q86W26 655 aa29.16■■■□□ 2.26
PTP4A1-203ENST00000473334 C7orf43Q8WVR3 580 aa29.16■■■□□ 2.26
PTP4A1-203ENST00000473334 TSR2Q969E8 191 aaKnown RBP29.16■■■□□ 2.26
PTP4A1-203ENST00000473334 KIF3CO14782 793 aa29.15■■■□□ 2.26
PTP4A1-203ENST00000473334 CHMP4AQ9BY43 222 aa29.15■■■□□ 2.26
PTP4A1-203ENST00000473334 TAOK3Q9H2K8 898 aa29.15■■■□□ 2.26
PTP4A1-203ENST00000473334 CCDC93Q567U6 631 aa29.14■■■□□ 2.26
PTP4A1-203ENST00000473334 FAM9BQ8IZU0 186 aa29.14■■■□□ 2.26
PTP4A1-203ENST00000473334 RPGRQ92834 1020 aaKnown RBP29.14■■■□□ 2.26
PTP4A1-203ENST00000473334 KDM2BQ8NHM5 1336 aa29.13■■■□□ 2.25
PTP4A1-203ENST00000473334 CCDC30Q5VVM6 783 aa29.12■■■□□ 2.25
PTP4A1-203ENST00000473334 TSPYL6Q8N831 410 aa29.12■■■□□ 2.25
PTP4A1-203ENST00000473334 HOXA10P31260 410 aaPredicted RBP29.11■■■□□ 2.25
PTP4A1-203ENST00000473334 SLC10A5Q5PT55 438 aa29.11■■■□□ 2.25
PTP4A1-203ENST00000473334 NLRP3Q96P20 1036 aa29.11■■■□□ 2.25
PTP4A1-203ENST00000473334 NMRK2Q9NPI5 230 aa29.11■■■□□ 2.25
PTP4A1-203ENST00000473334 SALL2Q9Y467 1007 aaPredicted RBP29.11■■■□□ 2.25
PTP4A1-203ENST00000473334 LAMB2P55268 1798 aa29.11■■■□□ 2.25
PTP4A1-203ENST00000473334 PHAXQ9H814 394 aaKnown RBP29.1■■■□□ 2.25
PTP4A1-203ENST00000473334 TRMT112Q9UI30 125 aaKnown RBP29.1■■■□□ 2.25
PTP4A1-203ENST00000473334 GOLGA2Q08379 1002 aa29.09■■■□□ 2.25
PTP4A1-203ENST00000473334 C3orf67Q6ZVT6 689 aa29.09■■■□□ 2.25
PTP4A1-203ENST00000473334 WDR63Q8IWG1 891 aa29.09■■■□□ 2.25
PTP4A1-203ENST00000473334 RBM17Q96I25 401 aaKnown RBP29.09■■■□□ 2.25
PTP4A1-203ENST00000473334 ISCA1Q9BUE6 129 aa29.09■■■□□ 2.25
PTP4A1-203ENST00000473334 SH3TC1Q8TE82 1336 aa29.08■■■□□ 2.25
PTP4A1-203ENST00000473334 RIC3Q7Z5B4 369 aa29.07■■■□□ 2.24
PTP4A1-203ENST00000473334 RTKN2Q8IZC4 609 aa29.07■■■□□ 2.24
PTP4A1-203ENST00000473334 CRAMP1Q96RY5 1269 aa29.07■■■□□ 2.24
PTP4A1-203ENST00000473334 FKBP4Q02790 459 aaKnown RBP eCLIP29.06■■■□□ 2.243e-8■■■□□ 18.5
PTP4A1-203ENST00000473334 TWISTNBQ3B726 338 aaPredicted RBP29.06■■■□□ 2.24
PTP4A1-203ENST00000473334 OLFM4Q6UX06 510 aa29.06■■■□□ 2.24
PTP4A1-203ENST00000473334 FANCIQ9NVI1 1328 aa29.05■■■□□ 2.24
PTP4A1-203ENST00000473334 GLTPD2A6NH11 291 aa29.05■■■□□ 2.24
PTP4A1-203ENST00000473334 ATP5J2-PTCD1G3V325 749 aa29.05■■■□□ 2.24
PTP4A1-203ENST00000473334 SYNE4Q8N205 404 aa29.05■■■□□ 2.24
PTP4A1-203ENST00000473334 DDX60Q8IY21 1712 aaKnown RBP29.05■■■□□ 2.24
PTP4A1-203ENST00000473334 HCLS1P14317 486 aaPredicted RBP29.04■■■□□ 2.24
PTP4A1-203ENST00000473334 SNED1Q8TER0 1413 aa29.03■■■□□ 2.24
PTP4A1-203ENST00000473334 TRIM28Q13263 835 aaKnown RBP29.03■■■□□ 2.24
PTP4A1-203ENST00000473334 CC2D2BQ6DHV5 1058 aa29.03■■■□□ 2.24
PTP4A1-203ENST00000473334 STK31Q9BXU1 1019 aa29.03■■■□□ 2.24
PTP4A1-203ENST00000473334 TOMM70O94826 608 aa29.02■■■□□ 2.24
PTP4A1-203ENST00000473334 DDX58O95786 925 aaKnown RBP29.02■■■□□ 2.24
PTP4A1-203ENST00000473334 ZNF428Q96B54 188 aa29.02■■■□□ 2.24
PTP4A1-203ENST00000473334 RRAGCQ9HB90 399 aa29.02■■■□□ 2.24
PTP4A1-203ENST00000473334 PPEF1O14829 653 aaPredicted RBP29.01■■■□□ 2.23
PTP4A1-203ENST00000473334 ABCC4O15439 1325 aa29■■■□□ 2.23
PTP4A1-203ENST00000473334 DPY19L2Q6NUT2 758 aa29■■■□□ 2.23
PTP4A1-203ENST00000473334 C16orf71Q8IYS4 520 aaPredicted RBP29■■■□□ 2.23
PTP4A1-203ENST00000473334 ZNF277Q9NRM2 450 aaPredicted RBP29■■■□□ 2.23
PTP4A1-203ENST00000473334 FAM89AQ96GI7 184 aa28.99■■■□□ 2.23
PTP4A1-203ENST00000473334 PSMD1Q99460 953 aa28.99■■■□□ 2.23
PTP4A1-203ENST00000473334 MYD88Q99836 296 aa28.99■■■□□ 2.23
PTP4A1-203ENST00000473334 WDR90Q96KV7 1748 aa28.98■■■□□ 2.23
PTP4A1-203ENST00000473334 TCERG1O14776 1098 aaKnown RBP28.98■■■□□ 2.23
PTP4A1-203ENST00000473334 GRIPAP1Q4V328 841 aa28.98■■■□□ 2.23
PTP4A1-203ENST00000473334 METTL22Q9BUU2 404 aaPredicted RBP28.97■■■□□ 2.23
PTP4A1-203ENST00000473334 CACNA1FO60840 1977 aa28.96■■■□□ 2.23
PTP4A1-203ENST00000473334 DDX46Q7L014 1031 aaKnown RBP28.96■■■□□ 2.23
PTP4A1-203ENST00000473334 IARSP41252 1262 aaKnown RBP28.95■■■□□ 2.22
PTP4A1-203ENST00000473334 CCDC191Q8NCU4 936 aa28.95■■■□□ 2.22
PTP4A1-203ENST00000473334 RBM46Q8TBY0 533 aaKnown RBP28.95■■■□□ 2.22
PTP4A1-203ENST00000473334 TMX4Q9H1E5 349 aaPredicted RBP28.95■■■□□ 2.22
PTP4A1-203ENST00000473334 MYH16Q9H6N6 1097 aa28.95■■■□□ 2.22
PTP4A1-203ENST00000473334 SPINK5Q9NQ38 1064 aaPredicted RBP28.95■■■□□ 2.22
PTP4A1-203ENST00000473334 MAP3K2Q9Y2U5 619 aa28.95■■■□□ 2.22
PTP4A1-203ENST00000473334 SLC4A2P04920 1241 aa28.94■■■□□ 2.22
PTP4A1-203ENST00000473334 VEGFAP15692 232 aaPredicted RBP28.94■■■□□ 2.22
PTP4A1-203ENST00000473334 EXOSC9Q06265 439 aaKnown RBP28.94■■■□□ 2.22
PTP4A1-203ENST00000473334 RTL5Q5HYW3 569 aaPredicted RBP28.94■■■□□ 2.22
PTP4A1-203ENST00000473334 KSR2Q6VAB6 950 aa28.94■■■□□ 2.22
PTP4A1-203ENST00000473334 ZBTB38Q8NAP3 1195 aaPredicted RBP28.94■■■□□ 2.22
PTP4A1-203ENST00000473334 ATP6V0A2Q9Y487 856 aa28.94■■■□□ 2.22
PTP4A1-203ENST00000473334 TAF1P21675 1872 aa28.93■■■□□ 2.22
PTP4A1-203ENST00000473334 PI4KAP2A4QPH2 592 aa28.93■■■□□ 2.22
PTP4A1-203ENST00000473334 IRS4O14654 1257 aaPredicted RBP28.93■■■□□ 2.22
PTP4A1-203ENST00000473334 BBOX1O75936 387 aa28.93■■■□□ 2.22
PTP4A1-203ENST00000473334 GRAPQ13588 217 aa28.93■■■□□ 2.22
PTP4A1-203ENST00000473334 SLC51AQ86UW1 340 aa28.93■■■□□ 2.22
PTP4A1-203ENST00000473334 PI4KAP1Q8N8J0 262 aa28.93■■■□□ 2.22
PTP4A1-203ENST00000473334 GRAPLQ8TC17 118 aaPredicted RBP28.93■■■□□ 2.22
PTP4A1-203ENST00000473334 VAMP4O75379 141 aa28.92■■■□□ 2.22
PTP4A1-203ENST00000473334 HSPA6P17066 643 aa28.92■■■□□ 2.22
PTP4A1-203ENST00000473334 SF3B3Q15393 1217 aaKnown RBP28.92■■■□□ 2.22
PTP4A1-203ENST00000473334 G2E3Q7L622 706 aa28.92■■■□□ 2.22
PTP4A1-203ENST00000473334 CWC25Q9NXE8 425 aaPredicted RBP28.92■■■□□ 2.22
PTP4A1-203ENST00000473334 ZNF521Q96K83 1311 aa28.91■■■□□ 2.22
PTP4A1-203ENST00000473334 PCCAP05165 728 aaPredicted RBP28.9■■■□□ 2.22
PTP4A1-203ENST00000473334 HSP90B1P14625 803 aaKnown RBP28.9■■■□□ 2.22
PTP4A1-203ENST00000473334 DDNO94850 711 aaPredicted RBP28.89■■■□□ 2.22
PTP4A1-203ENST00000473334 FLIIQ13045 1269 aa28.89■■■□□ 2.22
Retrieved 100 of 20,778 RNA–protein pairs in 146 ms