RNA–Protein interactions for RNA: ENST00000472928.5

HDAC1-205, Transcript of histone deacetylase 1, humanhuman

TSL 2

Gene HDAC1, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-205ENST00000472928 HSP90AB1P08238 724 aaKnown RBP8.49□□□□□ -1.05
HDAC1-205ENST00000472928 POTEIP0CG38 1075 aa8.49□□□□□ -1.05
HDAC1-205ENST00000472928 POTEJP0CG39 1038 aa8.49□□□□□ -1.05
HDAC1-205ENST00000472928 CABP4P57796 275 aa8.49□□□□□ -1.05
HDAC1-205ENST00000472928 MAP3K9P80192 1104 aa8.49□□□□□ -1.05
HDAC1-205ENST00000472928 NFIXQ14938 502 aa8.49□□□□□ -1.05
HDAC1-205ENST00000472928 USPL1Q5W0Q7 1092 aa8.49□□□□□ -1.05
HDAC1-205ENST00000472928 AFDNP55196 1824 aaKnown RBP8.49□□□□□ -1.05
HDAC1-205ENST00000472928 SOS1Q07889 1333 aaPredicted RBP8.49□□□□□ -1.05
HDAC1-205ENST00000472928 PPP2R1AP30153 589 aa8.48□□□□□ -1.05
HDAC1-205ENST00000472928 ZNF530Q6P9A1 599 aaPredicted RBP8.48□□□□□ -1.05
HDAC1-205ENST00000472928 MORC1Q86VD1 984 aa8.48□□□□□ -1.05
HDAC1-205ENST00000472928 TTLL6Q8N841 843 aa8.48□□□□□ -1.05
HDAC1-205ENST00000472928 BCL2L12Q9HB09 334 aa8.48□□□□□ -1.05
HDAC1-205ENST00000472928 CCDC88AQ3V6T2 1871 aa8.48□□□□□ -1.05
HDAC1-205ENST00000472928 PASKQ96RG2 1323 aa8.48□□□□□ -1.05
HDAC1-205ENST00000472928 ZPR1O75312 459 aa8.47□□□□□ -1.05
HDAC1-205ENST00000472928 C7P10643 843 aa8.47□□□□□ -1.05
HDAC1-205ENST00000472928 TNNT2P45379 298 aaPredicted RBP8.47□□□□□ -1.05
HDAC1-205ENST00000472928 CTCFP49711 727 aaPredicted RBP8.47□□□□□ -1.05
HDAC1-205ENST00000472928 FAM161AQ3B820 660 aa8.47□□□□□ -1.05
HDAC1-205ENST00000472928 PLEKHO1Q53GL0 409 aaPredicted RBP8.47□□□□□ -1.05
HDAC1-205ENST00000472928 C2CD5Q86YS7 1000 aa8.47□□□□□ -1.05
HDAC1-205ENST00000472928 DNAJC10Q8IXB1 793 aa8.47□□□□□ -1.05
HDAC1-205ENST00000472928 NFATC2IPQ8NCF5 419 aa8.47□□□□□ -1.05
HDAC1-205ENST00000472928 WBP1LQ9NX94 342 aa8.47□□□□□ -1.05
HDAC1-205ENST00000472928 COL3A1P02461 1466 aaPredicted RBP8.46□□□□□ -1.05
HDAC1-205ENST00000472928 GRXCR2A6NFK2 248 aa8.46□□□□□ -1.06
HDAC1-205ENST00000472928 SERPINB2P05120 415 aa8.46□□□□□ -1.06
HDAC1-205ENST00000472928 VEGFBP49765 207 aa8.46□□□□□ -1.06
HDAC1-205ENST00000472928 LBX1P52954 281 aa8.46□□□□□ -1.06
HDAC1-205ENST00000472928 FAM9BQ8IZU0 186 aa8.46□□□□□ -1.06
HDAC1-205ENST00000472928 ABHD8Q96I13 439 aa8.46□□□□□ -1.06
HDAC1-205ENST00000472928 NARFQ9UHQ1 456 aa8.46□□□□□ -1.06
HDAC1-205ENST00000472928 DICER1Q9UPY3 1922 aaKnown RBP8.46□□□□□ -1.06
HDAC1-205ENST00000472928 DDNO94850 711 aaPredicted RBP8.45□□□□□ -1.06
HDAC1-205ENST00000472928 HSPA8P11142 646 aaKnown RBP8.45□□□□□ -1.06
HDAC1-205ENST00000472928 CYP19A1P11511 503 aaPredicted RBP8.45□□□□□ -1.06
HDAC1-205ENST00000472928 MTHFSP49914 203 aa8.45□□□□□ -1.06
HDAC1-205ENST00000472928 ERFEQ4G0M1 354 aa8.45□□□□□ -1.06
HDAC1-205ENST00000472928 AMOTQ4VCS5 1084 aa8.45□□□□□ -1.06
HDAC1-205ENST00000472928 AEBP1Q8IUX7 1158 aa8.45□□□□□ -1.06
HDAC1-205ENST00000472928 KRI1Q8N9T8 703 aaKnown RBP8.45□□□□□ -1.06
HDAC1-205ENST00000472928 AIDAQ96BJ3 306 aa8.45□□□□□ -1.06
HDAC1-205ENST00000472928 COL15A1P39059 1388 aa8.45□□□□□ -1.06
HDAC1-205ENST00000472928 FER1L6Q2WGJ9 1857 aa8.45□□□□□ -1.06
HDAC1-205ENST00000472928 H0YIN7 160 aa8.44□□□□□ -1.06
HDAC1-205ENST00000472928 C21orf2O43822 256 aa8.44□□□□□ -1.06
HDAC1-205ENST00000472928 ITGBL1O95965 494 aaPredicted RBP8.44□□□□□ -1.06
HDAC1-205ENST00000472928 CENPBP07199 599 aaPredicted RBP8.44□□□□□ -1.06
HDAC1-205ENST00000472928 METRNQ9UJH8 293 aa8.44□□□□□ -1.06
HDAC1-205ENST00000472928 ZBTB1Q9Y2K1 713 aa8.44□□□□□ -1.06
HDAC1-205ENST00000472928 VIRMAQ69YN4 1812 aaKnown RBP8.44□□□□□ -1.06
HDAC1-205ENST00000472928 LTBP3Q9NS15 1303 aa8.44□□□□□ -1.06
HDAC1-205ENST00000472928 ANKRD31Q8N7Z5 1873 aa8.44□□□□□ -1.06
HDAC1-205ENST00000472928 TMEM88BA6NKF7 163 aa8.43□□□□□ -1.06
HDAC1-205ENST00000472928 OSBPP22059 807 aa8.43□□□□□ -1.06
HDAC1-205ENST00000472928 LDHDQ86WU2 507 aa8.43□□□□□ -1.06
HDAC1-205ENST00000472928 TAOK3Q9H2K8 898 aa8.43□□□□□ -1.06
HDAC1-205ENST00000472928 TAF1DQ9H5J8 278 aaPredicted RBP8.43□□□□□ -1.06
HDAC1-205ENST00000472928 PCDH10Q9P2E7 1040 aa8.43□□□□□ -1.06
HDAC1-205ENST00000472928 MRC1P22897 1456 aa8.43□□□□□ -1.06
HDAC1-205ENST00000472928 COL11A2P13942 1736 aaPredicted RBP8.43□□□□□ -1.06
HDAC1-205ENST00000472928 RASSF10A6NK89 507 aa8.42□□□□□ -1.06
HDAC1-205ENST00000472928 HNRNPUQ00839 825 aaKnown RBP eCLIP8.42□□□□□ -1.06
HDAC1-205ENST00000472928 SLC39A6Q13433 755 aa8.42□□□□□ -1.06
HDAC1-205ENST00000472928 WDR43Q15061 677 aaKnown RBP eCLIP8.42□□□□□ -1.06
HDAC1-205ENST00000472928 C1orf141Q5JVX7 400 aa8.42□□□□□ -1.06
HDAC1-205ENST00000472928 POTEHQ6S545 545 aa8.42□□□□□ -1.06
HDAC1-205ENST00000472928 C3orf67Q6ZVT6 689 aa8.42□□□□□ -1.06
HDAC1-205ENST00000472928 PNISRQ8TF01 805 aaKnown RBP8.42□□□□□ -1.06
HDAC1-205ENST00000472928 SLC52A2Q9HAB3 445 aa8.42□□□□□ -1.06
HDAC1-205ENST00000472928 SCN11AQ9UI33 1791 aa8.42□□□□□ -1.06
HDAC1-205ENST00000472928 DLG5Q8TDM6 1919 aa8.41□□□□□ -1.06
HDAC1-205ENST00000472928 ADAMTSL1Q8N6G6 1762 aa8.41□□□□□ -1.06
HDAC1-205ENST00000472928 TRIM66O15016 1216 aa8.41□□□□□ -1.06
HDAC1-205ENST00000472928 RGS19P49795 217 aa8.41□□□□□ -1.06
HDAC1-205ENST00000472928 TBC1D9BQ66K14 1250 aa8.41□□□□□ -1.06
HDAC1-205ENST00000472928 PRR5LQ6MZQ0 368 aa8.41□□□□□ -1.06
HDAC1-205ENST00000472928 BICDL1Q6ZP65 573 aa8.41□□□□□ -1.06
HDAC1-205ENST00000472928 CCDC24Q8N4L8 307 aa8.41□□□□□ -1.06
HDAC1-205ENST00000472928 PTCD2Q8WV60 388 aaKnown RBP8.41□□□□□ -1.06
HDAC1-205ENST00000472928 DDX12PQ92771 950 aa8.41□□□□□ -1.06
HDAC1-205ENST00000472928 ZNF622Q969S3 477 aaKnown RBP eCLIP8.41□□□□□ -1.066e-16■□□□□ 9.3
HDAC1-205ENST00000472928 CFAP53Q96M91 514 aa8.41□□□□□ -1.06
HDAC1-205ENST00000472928 BRIP1Q9BX63 1249 aa8.41□□□□□ -1.06
HDAC1-205ENST00000472928 LGR6Q9HBX8 967 aa8.41□□□□□ -1.06
HDAC1-205ENST00000472928 SCN4AP35499 1836 aa8.4□□□□□ -1.06
HDAC1-205ENST00000472928 SLX4Q8IY92 1834 aa8.4□□□□□ -1.06
HDAC1-205ENST00000472928 ZNF541Q9H0D2 1346 aa8.4□□□□□ -1.06
HDAC1-205ENST00000472928 IQCA1LA6NCM1 817 aa8.4□□□□□ -1.06
HDAC1-205ENST00000472928 TNRC18O15417 2968 aaPredicted RBP8.4□□□□□ -1.06
HDAC1-205ENST00000472928 TBC1D12O60347 775 aa8.4□□□□□ -1.06
HDAC1-205ENST00000472928 EVI5O60447 810 aa8.4□□□□□ -1.06
HDAC1-205ENST00000472928 EIF5P55010 431 aaKnown RBP8.4□□□□□ -1.06
HDAC1-205ENST00000472928 MLLT1Q03111 559 aaPredicted RBP8.4□□□□□ -1.06
HDAC1-205ENST00000472928 C7orf43Q8WVR3 580 aa8.4□□□□□ -1.06
HDAC1-205ENST00000472928 PDZRN3Q9UPQ7 1066 aa8.4□□□□□ -1.06
HDAC1-205ENST00000472928 WDR33Q9C0J8 1336 aaKnown RBP8.39□□□□□ -1.07
HDAC1-205ENST00000472928 RNMTO43148 476 aaKnown RBP8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms