RNA–Protein interactions for RNA: ENST00000472638.1

UBQLN4-203, Transcript of ubiquilin 4, humanhuman

TSL 5

Gene UBQLN4, Length 654 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN4-203ENST00000472638 ANKRD13DQ6ZTN6 518 aa25.68■■□□□ 1.7
UBQLN4-203ENST00000472638 NLRP10Q86W26 655 aa25.68■■□□□ 1.7
UBQLN4-203ENST00000472638 TSPYL6Q8N831 410 aa25.68■■□□□ 1.7
UBQLN4-203ENST00000472638 PLBD2Q8NHP8 589 aa25.68■■□□□ 1.7
UBQLN4-203ENST00000472638 SBF1O95248 1867 aa25.67■■□□□ 1.7
UBQLN4-203ENST00000472638 ALDH1B1P30837 517 aa25.67■■□□□ 1.7
UBQLN4-203ENST00000472638 CRY2Q49AN0 593 aa25.67■■□□□ 1.7
UBQLN4-203ENST00000472638 C3orf67Q6ZVT6 689 aa25.67■■□□□ 1.7
UBQLN4-203ENST00000472638 C7orf43Q8WVR3 580 aa25.67■■□□□ 1.7
UBQLN4-203ENST00000472638 RPGRQ92834 1020 aaKnown RBP25.67■■□□□ 1.7
UBQLN4-203ENST00000472638 TAOK3Q9H2K8 898 aa25.67■■□□□ 1.7
UBQLN4-203ENST00000472638 SOGA3Q5TF21 947 aa25.66■■□□□ 1.7
UBQLN4-203ENST00000472638 PHAXQ9H814 394 aaKnown RBP25.66■■□□□ 1.7
UBQLN4-203ENST00000472638 CCDC93Q567U6 631 aa25.65■■□□□ 1.7
UBQLN4-203ENST00000472638 SYNE4Q8N205 404 aa25.65■■□□□ 1.7
UBQLN4-203ENST00000472638 KDM2BQ8NHM5 1336 aa25.64■■□□□ 1.7
UBQLN4-203ENST00000472638 ATP5J2-PTCD1G3V325 749 aa25.64■■□□□ 1.7
UBQLN4-203ENST00000472638 TRMT112Q9UI30 125 aaKnown RBP25.64■■□□□ 1.7
UBQLN4-203ENST00000472638 ARFGEF2Q9Y6D5 1785 aa25.64■■□□□ 1.69
UBQLN4-203ENST00000472638 RIC1Q4ADV7 1423 aa25.63■■□□□ 1.69
UBQLN4-203ENST00000472638 TCERG1O14776 1098 aaKnown RBP25.63■■□□□ 1.69
UBQLN4-203ENST00000472638 HCLS1P14317 486 aaPredicted RBP25.63■■□□□ 1.69
UBQLN4-203ENST00000472638 NLRP3Q96P20 1036 aa25.63■■□□□ 1.69
UBQLN4-203ENST00000472638 LTBP3Q9NS15 1303 aa25.63■■□□□ 1.69
UBQLN4-203ENST00000472638 SLC10A5Q5PT55 438 aa25.62■■□□□ 1.69
UBQLN4-203ENST00000472638 CCDC30Q5VVM6 783 aa25.62■■□□□ 1.69
UBQLN4-203ENST00000472638 RIC3Q7Z5B4 369 aa25.62■■□□□ 1.69
UBQLN4-203ENST00000472638 RBM17Q96I25 401 aaKnown RBP25.62■■□□□ 1.69
UBQLN4-203ENST00000472638 IL16Q14005 1332 aa25.62■■□□□ 1.69
UBQLN4-203ENST00000472638 ANKRD36CQ5JPF3 1778 aa25.61■■□□□ 1.69
UBQLN4-203ENST00000472638 HOXA10P31260 410 aaPredicted RBP25.61■■□□□ 1.69
UBQLN4-203ENST00000472638 GOLGA2Q08379 1002 aa25.61■■□□□ 1.69
UBQLN4-203ENST00000472638 NCBP3Q53F19 620 aaKnown RBP25.61■■□□□ 1.69
UBQLN4-203ENST00000472638 RRAGCQ9HB90 399 aa25.61■■□□□ 1.69
UBQLN4-203ENST00000472638 FER1L6Q2WGJ9 1857 aa25.61■■□□□ 1.69
UBQLN4-203ENST00000472638 ZC3H4Q9UPT8 1303 aaKnown RBP25.61■■□□□ 1.69
UBQLN4-203ENST00000472638 ISCA1Q9BUE6 129 aa25.6■■□□□ 1.69
UBQLN4-203ENST00000472638 RNF123Q5XPI4 1314 aa25.6■■□□□ 1.69
UBQLN4-203ENST00000472638 SH3TC1Q8TE82 1336 aa25.6■■□□□ 1.69
UBQLN4-203ENST00000472638 FKBP4Q02790 459 aaKnown RBP eCLIP25.59■■□□□ 1.69
UBQLN4-203ENST00000472638 TWISTNBQ3B726 338 aaPredicted RBP25.59■■□□□ 1.69
UBQLN4-203ENST00000472638 SLC51AQ86UW1 340 aa25.59■■□□□ 1.69
UBQLN4-203ENST00000472638 TIAM2Q8IVF5 1701 aa25.58■■□□□ 1.69
UBQLN4-203ENST00000472638 RTKN2Q8IZC4 609 aa25.58■■□□□ 1.69
UBQLN4-203ENST00000472638 CRAMP1Q96RY5 1269 aa25.58■■□□□ 1.69
UBQLN4-203ENST00000472638 ZNF277Q9NRM2 450 aaPredicted RBP25.58■■□□□ 1.69
UBQLN4-203ENST00000472638 FANCIQ9NVI1 1328 aa25.58■■□□□ 1.69
UBQLN4-203ENST00000472638 CCDC88AQ3V6T2 1871 aa25.57■■□□□ 1.68
UBQLN4-203ENST00000472638 GLTPD2A6NH11 291 aa25.57■■□□□ 1.68
UBQLN4-203ENST00000472638 RTL5Q5HYW3 569 aaPredicted RBP25.57■■□□□ 1.68
UBQLN4-203ENST00000472638 WDR63Q8IWG1 891 aa25.57■■□□□ 1.68
UBQLN4-203ENST00000472638 FAM89AQ96GI7 184 aa25.57■■□□□ 1.68
UBQLN4-203ENST00000472638 CHMP4AQ9BY43 222 aa25.57■■□□□ 1.68
UBQLN4-203ENST00000472638 PPEF1O14829 653 aaPredicted RBP25.56■■□□□ 1.68
UBQLN4-203ENST00000472638 C16orf71Q8IYS4 520 aaPredicted RBP25.56■■□□□ 1.68
UBQLN4-203ENST00000472638 MYD88Q99836 296 aa25.56■■□□□ 1.68
UBQLN4-203ENST00000472638 TOMM70O94826 608 aa25.55■■□□□ 1.68
UBQLN4-203ENST00000472638 STK31Q9BXU1 1019 aa25.55■■□□□ 1.68
UBQLN4-203ENST00000472638 DPY19L2Q6NUT2 758 aa25.54■■□□□ 1.68
UBQLN4-203ENST00000472638 SPINK5Q9NQ38 1064 aaPredicted RBP25.54■■□□□ 1.68
UBQLN4-203ENST00000472638 ABCC4O15439 1325 aa25.54■■□□□ 1.68
UBQLN4-203ENST00000472638 DDX58O95786 925 aaKnown RBP25.53■■□□□ 1.68
UBQLN4-203ENST00000472638 EXOSC9Q06265 439 aaKnown RBP25.52■■□□□ 1.68
UBQLN4-203ENST00000472638 TRIM28Q13263 835 aaKnown RBP25.52■■□□□ 1.68
UBQLN4-203ENST00000472638 CC2D2BQ6DHV5 1058 aa25.51■■□□□ 1.67
UBQLN4-203ENST00000472638 DDX46Q7L014 1031 aaKnown RBP25.51■■□□□ 1.67
UBQLN4-203ENST00000472638 G2E3Q7L622 706 aa25.51■■□□□ 1.67
UBQLN4-203ENST00000472638 MAP3K2Q9Y2U5 619 aa25.51■■□□□ 1.67
UBQLN4-203ENST00000472638 DDNO94850 711 aaPredicted RBP25.5■■□□□ 1.67
UBQLN4-203ENST00000472638 SLC4A2P04920 1241 aa25.5■■□□□ 1.67
UBQLN4-203ENST00000472638 IARSP41252 1262 aaKnown RBP25.5■■□□□ 1.67
UBQLN4-203ENST00000472638 SNED1Q8TER0 1413 aa25.5■■□□□ 1.67
UBQLN4-203ENST00000472638 METTL22Q9BUU2 404 aaPredicted RBP25.5■■□□□ 1.67
UBQLN4-203ENST00000472638 PI4KAP2A4QPH2 592 aa25.49■■□□□ 1.67
UBQLN4-203ENST00000472638 IRS4O14654 1257 aaPredicted RBP25.49■■□□□ 1.67
UBQLN4-203ENST00000472638 VEGFAP15692 232 aaPredicted RBP25.49■■□□□ 1.67
UBQLN4-203ENST00000472638 PI4KAP1Q8N8J0 262 aa25.49■■□□□ 1.67
UBQLN4-203ENST00000472638 JARID2Q92833 1246 aaPredicted RBP25.49■■□□□ 1.67
UBQLN4-203ENST00000472638 PSMD1Q99460 953 aa25.49■■□□□ 1.67
UBQLN4-203ENST00000472638 DICER1Q9UPY3 1922 aaKnown RBP25.48■■□□□ 1.67
UBQLN4-203ENST00000472638 HSPA6P17066 643 aa25.48■■□□□ 1.67
UBQLN4-203ENST00000472638 KSR2Q6VAB6 950 aa25.48■■□□□ 1.67
UBQLN4-203ENST00000472638 RBM46Q8TBY0 533 aaKnown RBP25.48■■□□□ 1.67
UBQLN4-203ENST00000472638 TMX4Q9H1E5 349 aaPredicted RBP25.48■■□□□ 1.67
UBQLN4-203ENST00000472638 ATP6V0A2Q9Y487 856 aa25.48■■□□□ 1.67
UBQLN4-203ENST00000472638 LAMB2P55268 1798 aa25.48■■□□□ 1.67
UBQLN4-203ENST00000472638 VAMP4O75379 141 aa25.47■■□□□ 1.67
UBQLN4-203ENST00000472638 GRAPQ13588 217 aa25.47■■□□□ 1.67
UBQLN4-203ENST00000472638 ZBTB38Q8NAP3 1195 aaPredicted RBP25.47■■□□□ 1.67
UBQLN4-203ENST00000472638 GRAPLQ8TC17 118 aaPredicted RBP25.47■■□□□ 1.67
UBQLN4-203ENST00000472638 MYH16Q9H6N6 1097 aa25.47■■□□□ 1.67
UBQLN4-203ENST00000472638 POTECB2RU33 542 aa25.46■■□□□ 1.67
UBQLN4-203ENST00000472638 BBOX1O75936 387 aa25.46■■□□□ 1.67
UBQLN4-203ENST00000472638 CCDC191Q8NCU4 936 aa25.46■■□□□ 1.67
UBQLN4-203ENST00000472638 CWC25Q9NXE8 425 aaPredicted RBP25.46■■□□□ 1.67
UBQLN4-203ENST00000472638 ZNF541Q9H0D2 1346 aa25.45■■□□□ 1.66
UBQLN4-203ENST00000472638 GRIPAP1Q4V328 841 aa25.45■■□□□ 1.66
UBQLN4-203ENST00000472638 DDX60Q8IY21 1712 aaKnown RBP25.45■■□□□ 1.66
UBQLN4-203ENST00000472638 SF3B3Q15393 1217 aaKnown RBP25.44■■□□□ 1.66
UBQLN4-203ENST00000472638 PCCAP05165 728 aaPredicted RBP25.43■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms