RNA–Protein interactions for RNA: ENST00000472588.5

PAXBP1-208, Transcript of PAX3 and PAX7 binding protein 1, humanhuman

TSL 1 (best)

Gene PAXBP1, Length 1,410 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAXBP1-208ENST00000472588 USPL1Q5W0Q7 1092 aa28■■■□□ 2.07
PAXBP1-208ENST00000472588 ZNF34Q8IZ26 560 aa28■■■□□ 2.07
PAXBP1-208ENST00000472588 AMIGO3Q86WK7 504 aa27.99■■■□□ 2.07
PAXBP1-208ENST00000472588 CCDC136Q96JN2 1154 aa27.98■■■□□ 2.07
PAXBP1-208ENST00000472588 SMIM5Q71RC9 77 aa27.97■■■□□ 2.07
PAXBP1-208ENST00000472588 NBPF7P0C2Y1 421 aaPredicted RBP27.96■■■□□ 2.07
PAXBP1-208ENST00000472588 GPTP24298 496 aa27.96■■■□□ 2.07
PAXBP1-208ENST00000472588 NLRP10Q86W26 655 aa27.96■■■□□ 2.07
PAXBP1-208ENST00000472588 NIP7Q9Y221 180 aaKnown RBP eCLIP27.96■■■□□ 2.07
PAXBP1-208ENST00000472588 SRP68Q9UHB9 627 aaKnown RBP27.95■■■□□ 2.07
PAXBP1-208ENST00000472588 H7C1W4 665 aa27.94■■■□□ 2.06
PAXBP1-208ENST00000472588 PPP1R42Q7Z4L9 355 aa27.94■■■□□ 2.06
PAXBP1-208ENST00000472588 RPAP2Q8IXW5 612 aaPredicted RBP27.94■■■□□ 2.06
PAXBP1-208ENST00000472588 PDGFDQ9GZP0 370 aaPredicted RBP27.94■■■□□ 2.06
PAXBP1-208ENST00000472588 BCL2L12Q9HB09 334 aa27.94■■■□□ 2.06
PAXBP1-208ENST00000472588 ZBTB38Q8NAP3 1195 aaPredicted RBP27.93■■■□□ 2.06
PAXBP1-208ENST00000472588 SETDB2Q96T68 719 aa27.93■■■□□ 2.06
PAXBP1-208ENST00000472588 PCCAP05165 728 aaPredicted RBP27.92■■■□□ 2.06
PAXBP1-208ENST00000472588 PCDHB15Q9Y5E8 787 aa27.92■■■□□ 2.06
PAXBP1-208ENST00000472588 MSH5O43196 834 aa27.92■■■□□ 2.06
PAXBP1-208ENST00000472588 UBE3BQ7Z3V4 1068 aa27.92■■■□□ 2.06
PAXBP1-208ENST00000472588 C1orf115Q9H7X2 142 aa27.92■■■□□ 2.06
PAXBP1-208ENST00000472588 LRRFIP2Q9Y608 721 aaKnown RBP27.92■■■□□ 2.06
PAXBP1-208ENST00000472588 LRP5O75197 1615 aa27.91■■■□□ 2.06
PAXBP1-208ENST00000472588 HSP90B1P14625 803 aaKnown RBP27.91■■■□□ 2.06
PAXBP1-208ENST00000472588 COL23A1Q86Y22 540 aaPredicted RBP27.91■■■□□ 2.06
PAXBP1-208ENST00000472588 UTP14AQ9BVJ6 771 aaKnown RBP27.91■■■□□ 2.06
PAXBP1-208ENST00000472588 RWDD1Q9H446 243 aaPredicted RBP27.91■■■□□ 2.06
PAXBP1-208ENST00000472588 TRMT112Q9UI30 125 aaKnown RBP27.91■■■□□ 2.06
PAXBP1-208ENST00000472588 UBN2Q6ZU65 1347 aa27.9■■■□□ 2.06
PAXBP1-208ENST00000472588 PNPLA7Q6ZV29 1317 aa27.9■■■□□ 2.06
PAXBP1-208ENST00000472588 GYS1P13807 737 aa27.9■■■□□ 2.06
PAXBP1-208ENST00000472588 TBC1D9BQ66K14 1250 aa27.9■■■□□ 2.06
PAXBP1-208ENST00000472588 NLGN1Q8N2Q7 840 aa27.89■■■□□ 2.06
PAXBP1-208ENST00000472588 NYXQ9GZU5 481 aa27.89■■■□□ 2.06
PAXBP1-208ENST00000472588 HMMRO75330 724 aa27.88■■■□□ 2.05
PAXBP1-208ENST00000472588 B4GALNT3Q6L9W6 998 aa27.88■■■□□ 2.05
PAXBP1-208ENST00000472588 ANKRD44Q8N8A2 993 aa27.88■■■□□ 2.05
PAXBP1-208ENST00000472588 CDHR2Q9BYE9 1310 aa27.88■■■□□ 2.05
PAXBP1-208ENST00000472588 CASP7P55210 303 aa27.87■■■□□ 2.05
PAXBP1-208ENST00000472588 HDAC1Q13547 482 aaPredicted RBP27.87■■■□□ 2.05
PAXBP1-208ENST00000472588 SUSD4Q5VX71 490 aa27.87■■■□□ 2.05
PAXBP1-208ENST00000472588 CEP85Q6P2H3 762 aa27.87■■■□□ 2.05
PAXBP1-208ENST00000472588 SH3TC1Q8TE82 1336 aa27.87■■■□□ 2.05
PAXBP1-208ENST00000472588 BICDL1Q6ZP65 573 aa27.86■■■□□ 2.05
PAXBP1-208ENST00000472588 SUCLG2Q96I99 432 aa27.86■■■□□ 2.05
PAXBP1-208ENST00000472588 CARMIL3Q8ND23 1372 aa27.86■■■□□ 2.05
PAXBP1-208ENST00000472588 COL24A1Q17RW2 1714 aa27.86■■■□□ 2.05
PAXBP1-208ENST00000472588 ATP8B2P98198 1209 aa27.85■■■□□ 2.05
PAXBP1-208ENST00000472588 FAM89AQ96GI7 184 aa27.85■■■□□ 2.05
PAXBP1-208ENST00000472588 SRCAPQ6ZRS2 3230 aa27.85■■■□□ 2.05
PAXBP1-208ENST00000472588 ZBTB7AO95365 584 aa27.84■■■□□ 2.05
PAXBP1-208ENST00000472588 NTSR2O95665 410 aa27.84■■■□□ 2.05
PAXBP1-208ENST00000472588 MTX1Q13505 466 aa27.84■■■□□ 2.05
PAXBP1-208ENST00000472588 RTL5Q5HYW3 569 aaPredicted RBP27.84■■■□□ 2.05
PAXBP1-208ENST00000472588 TPTE2Q6XPS3 522 aa27.84■■■□□ 2.05
PAXBP1-208ENST00000472588 PLA2G12BQ9BX93 195 aa27.84■■■□□ 2.05
PAXBP1-208ENST00000472588 GTF2E1P29083 439 aaPredicted RBP27.83■■■□□ 2.05
PAXBP1-208ENST00000472588 NFIXQ14938 502 aa27.83■■■□□ 2.05
PAXBP1-208ENST00000472588 NBPF5PQ86XG9 351 aaPredicted RBP27.83■■■□□ 2.05
PAXBP1-208ENST00000472588 JARID2Q92833 1246 aaPredicted RBP27.83■■■□□ 2.05
PAXBP1-208ENST00000472588 BICC1Q9H694 974 aaKnown RBP27.83■■■□□ 2.05
PAXBP1-208ENST00000472588 FAM177BA6PVY3 158 aa27.82■■■□□ 2.04
PAXBP1-208ENST00000472588 IRS4O14654 1257 aaPredicted RBP27.82■■■□□ 2.04
PAXBP1-208ENST00000472588 CENPQQ7L2Z9 268 aaPredicted RBP27.82■■■□□ 2.04
PAXBP1-208ENST00000472588 KAZALD1Q96I82 304 aa27.82■■■□□ 2.04
PAXBP1-208ENST00000472588 SPON1Q9HCB6 807 aa27.82■■■□□ 2.04
PAXBP1-208ENST00000472588 TM4SF1P30408 202 aa27.81■■■□□ 2.04
PAXBP1-208ENST00000472588 RABL6Q3YEC7 729 aaPredicted RBP27.8■■■□□ 2.04
PAXBP1-208ENST00000472588 SIRT2Q8IXJ6 389 aa27.8■■■□□ 2.04
PAXBP1-208ENST00000472588 SLC16A10Q8TF71 515 aa27.8■■■□□ 2.04
PAXBP1-208ENST00000472588 MTFR1LQ9H019 292 aa27.8■■■□□ 2.04
PAXBP1-208ENST00000472588 MYH3P11055 1940 aa27.79■■■□□ 2.04
PAXBP1-208ENST00000472588 NPHP1O15259 732 aa27.79■■■□□ 2.04
PAXBP1-208ENST00000472588 SRGAP3O43295 1099 aa27.79■■■□□ 2.04
PAXBP1-208ENST00000472588 PDE8AO60658 829 aa27.79■■■□□ 2.04
PAXBP1-208ENST00000472588 ATF5Q9Y2D1 282 aaPredicted RBP27.79■■■□□ 2.04
PAXBP1-208ENST00000472588 LAMB2P55268 1798 aa27.78■■■□□ 2.04
PAXBP1-208ENST00000472588 IGHDP01880 384 aa27.78■■■□□ 2.04
PAXBP1-208ENST00000472588 FOXO4P98177 505 aa27.78■■■□□ 2.04
PAXBP1-208ENST00000472588 SSH3Q8TE77 659 aa27.78■■■□□ 2.04
PAXBP1-208ENST00000472588 GCC1Q96CN9 775 aa27.77■■■□□ 2.04
PAXBP1-208ENST00000472588 SLC10A5Q5PT55 438 aa27.76■■■□□ 2.04
PAXBP1-208ENST00000472588 KDM2BQ8NHM5 1336 aa27.76■■■□□ 2.03
PAXBP1-208ENST00000472588 PNMA6EA0A0J9YXQ4 647 aa27.75■■■□□ 2.03
PAXBP1-208ENST00000472588 POLA2Q14181 598 aa27.75■■■□□ 2.03
PAXBP1-208ENST00000472588 EPHA10Q5JZY3 1008 aa27.75■■■□□ 2.03
PAXBP1-208ENST00000472588 LMBR1LQ6UX01 489 aa27.75■■■□□ 2.03
PAXBP1-208ENST00000472588 NUTM1Q86Y26 1132 aa27.75■■■□□ 2.03
PAXBP1-208ENST00000472588 CNBD1Q8NA66 436 aa27.75■■■□□ 2.03
PAXBP1-208ENST00000472588 SERPINB2P05120 415 aa27.75■■■□□ 2.03
PAXBP1-208ENST00000472588 SYNE4Q8N205 404 aa27.75■■■□□ 2.03
PAXBP1-208ENST00000472588 DDX60Q8IY21 1712 aaKnown RBP27.74■■■□□ 2.03
PAXBP1-208ENST00000472588 CSF1RP07333 972 aa27.74■■■□□ 2.03
PAXBP1-208ENST00000472588 CTSWP56202 376 aa27.74■■■□□ 2.03
PAXBP1-208ENST00000472588 ERFEQ4G0M1 354 aa27.74■■■□□ 2.03
PAXBP1-208ENST00000472588 PARP3Q9Y6F1 533 aa27.74■■■□□ 2.03
PAXBP1-208ENST00000472588 POLRMTO00411 1230 aaKnown RBP27.73■■■□□ 2.03
PAXBP1-208ENST00000472588 ST5P78524 1137 aa27.73■■■□□ 2.03
PAXBP1-208ENST00000472588 DCTPP1Q9H773 170 aa27.73■■■□□ 2.03
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms