RNA–Protein interactions for RNA: ENST00000472523.1

ZIC1-202, Transcript of Zic family member 1, humanhuman

TSL 4

Gene ZIC1, Length 567 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC1-202ENST00000472523 HOXA10P31260 410 aaPredicted RBP28.44■■■□□ 2.14
ZIC1-202ENST00000472523 TCIRG1Q13488 830 aa28.44■■■□□ 2.14
ZIC1-202ENST00000472523 CCDC93Q567U6 631 aa28.44■■■□□ 2.14
ZIC1-202ENST00000472523 SLC10A5Q5PT55 438 aa28.44■■■□□ 2.14
ZIC1-202ENST00000472523 UTP14AQ9BVJ6 771 aaKnown RBP28.44■■■□□ 2.14
ZIC1-202ENST00000472523 TIAM2Q8IVF5 1701 aa28.43■■■□□ 2.14
ZIC1-202ENST00000472523 ANKRD36CQ5JPF3 1778 aa28.43■■■□□ 2.14
ZIC1-202ENST00000472523 CCDC27Q2M243 656 aa28.43■■■□□ 2.14
ZIC1-202ENST00000472523 RRAGCQ9HB90 399 aa28.43■■■□□ 2.14
ZIC1-202ENST00000472523 MRS2Q9HD23 443 aa28.43■■■□□ 2.14
ZIC1-202ENST00000472523 CEP350Q5VT06 3117 aa28.42■■■□□ 2.14
ZIC1-202ENST00000472523 HYPKQ9NX55 129 aa28.42■■■□□ 2.14
ZIC1-202ENST00000472523 RNF123Q5XPI4 1314 aa28.42■■■□□ 2.14
ZIC1-202ENST00000472523 HSPA6P17066 643 aa28.41■■■□□ 2.14
ZIC1-202ENST00000472523 NCBP3Q53F19 620 aaKnown RBP28.41■■■□□ 2.14
ZIC1-202ENST00000472523 NLRP10Q86W26 655 aa28.41■■■□□ 2.14
ZIC1-202ENST00000472523 RTKN2Q8IZC4 609 aa28.41■■■□□ 2.14
ZIC1-202ENST00000472523 PLBD2Q8NHP8 589 aa28.41■■■□□ 2.14
ZIC1-202ENST00000472523 ANKRD13DQ6ZTN6 518 aa28.4■■■□□ 2.14
ZIC1-202ENST00000472523 RBM46Q8TBY0 533 aaKnown RBP28.4■■■□□ 2.14
ZIC1-202ENST00000472523 RPGRQ92834 1020 aaKnown RBP28.4■■■□□ 2.14
ZIC1-202ENST00000472523 NLRP3Q96P20 1036 aa28.39■■■□□ 2.14
ZIC1-202ENST00000472523 CRAMP1Q96RY5 1269 aa28.39■■■□□ 2.14
ZIC1-202ENST00000472523 FKBP4Q02790 459 aaKnown RBP eCLIP28.38■■■□□ 2.13
ZIC1-202ENST00000472523 DPY19L2Q6NUT2 758 aa28.38■■■□□ 2.13
ZIC1-202ENST00000472523 OLFM4Q6UX06 510 aa28.38■■■□□ 2.13
ZIC1-202ENST00000472523 C3orf67Q6ZVT6 689 aa28.38■■■□□ 2.13
ZIC1-202ENST00000472523 C16orf71Q8IYS4 520 aaPredicted RBP28.38■■■□□ 2.13
ZIC1-202ENST00000472523 RBM17Q96I25 401 aaKnown RBP28.38■■■□□ 2.13
ZIC1-202ENST00000472523 WWC1Q8IX03 1113 aa28.37■■■□□ 2.13
ZIC1-202ENST00000472523 C8orf58Q8NAV2 365 aa28.37■■■□□ 2.13
ZIC1-202ENST00000472523 ELL2O00472 640 aaPredicted RBP28.36■■■□□ 2.13
ZIC1-202ENST00000472523 CC2D2BQ6DHV5 1058 aa28.36■■■□□ 2.13
ZIC1-202ENST00000472523 VEGFAP15692 232 aaPredicted RBP28.35■■■□□ 2.13
ZIC1-202ENST00000472523 ISCA1Q9BUE6 129 aa28.35■■■□□ 2.13
ZIC1-202ENST00000472523 CHMP4AQ9BY43 222 aa28.35■■■□□ 2.13
ZIC1-202ENST00000472523 SNED1Q8TER0 1413 aa28.35■■■□□ 2.13
ZIC1-202ENST00000472523 TRMT112Q9UI30 125 aaKnown RBP28.34■■■□□ 2.13
ZIC1-202ENST00000472523 WDR90Q96KV7 1748 aa28.33■■■□□ 2.13
ZIC1-202ENST00000472523 GRIPAP1Q4V328 841 aa28.33■■■□□ 2.13
ZIC1-202ENST00000472523 PSMD1Q99460 953 aa28.33■■■□□ 2.13
ZIC1-202ENST00000472523 SH3TC1Q8TE82 1336 aa28.33■■■□□ 2.13
ZIC1-202ENST00000472523 POTECB2RU33 542 aa28.32■■■□□ 2.12
ZIC1-202ENST00000472523 FSTL1Q12841 308 aa28.32■■■□□ 2.12
ZIC1-202ENST00000472523 SYNE4Q8N205 404 aa28.32■■■□□ 2.12
ZIC1-202ENST00000472523 ZNF277Q9NRM2 450 aaPredicted RBP28.32■■■□□ 2.12
ZIC1-202ENST00000472523 TRIM28Q13263 835 aaKnown RBP28.31■■■□□ 2.12
ZIC1-202ENST00000472523 IL16Q14005 1332 aa28.31■■■□□ 2.12
ZIC1-202ENST00000472523 HCLS1P14317 486 aaPredicted RBP28.3■■■□□ 2.12
ZIC1-202ENST00000472523 TSPYL6Q8N831 410 aa28.3■■■□□ 2.12
ZIC1-202ENST00000472523 PHAXQ9H814 394 aaKnown RBP28.3■■■□□ 2.12
ZIC1-202ENST00000472523 PPEF1O14829 653 aaPredicted RBP28.29■■■□□ 2.12
ZIC1-202ENST00000472523 CCDC30Q5VVM6 783 aa28.29■■■□□ 2.12
ZIC1-202ENST00000472523 TSR2Q969E8 191 aaKnown RBP28.29■■■□□ 2.12
ZIC1-202ENST00000472523 LAMB2P55268 1798 aa28.29■■■□□ 2.12
ZIC1-202ENST00000472523 ATP5J2-PTCD1G3V325 749 aa28.28■■■□□ 2.12
ZIC1-202ENST00000472523 IARSP41252 1262 aaKnown RBP28.28■■■□□ 2.12
ZIC1-202ENST00000472523 APLP1P51693 650 aa28.27■■■□□ 2.12
ZIC1-202ENST00000472523 GOLGA2Q08379 1002 aa28.27■■■□□ 2.12
ZIC1-202ENST00000472523 RIC3Q7Z5B4 369 aa28.27■■■□□ 2.12
ZIC1-202ENST00000472523 ABCC4O15439 1325 aa28.26■■■□□ 2.11
ZIC1-202ENST00000472523 DDNO94850 711 aaPredicted RBP28.26■■■□□ 2.11
ZIC1-202ENST00000472523 SMC1BQ8NDV3 1235 aa28.26■■■□□ 2.11
ZIC1-202ENST00000472523 ATP6V0A2Q9Y487 856 aa28.26■■■□□ 2.11
ZIC1-202ENST00000472523 BBOX1O75936 387 aa28.25■■■□□ 2.11
ZIC1-202ENST00000472523 FZD9O00144 591 aa28.24■■■□□ 2.11
ZIC1-202ENST00000472523 WDR63Q8IWG1 891 aa28.24■■■□□ 2.11
ZIC1-202ENST00000472523 FAM89AQ96GI7 184 aa28.24■■■□□ 2.11
ZIC1-202ENST00000472523 L3MBTL3Q96JM7 780 aaPredicted RBP28.23■■■□□ 2.11
ZIC1-202ENST00000472523 DDX60Q8IY21 1712 aaKnown RBP28.23■■■□□ 2.11
ZIC1-202ENST00000472523 TCERG1O14776 1098 aaKnown RBP28.22■■■□□ 2.11
ZIC1-202ENST00000472523 DDX46Q7L014 1031 aaKnown RBP28.22■■■□□ 2.11
ZIC1-202ENST00000472523 SLC51AQ86UW1 340 aa28.22■■■□□ 2.11
ZIC1-202ENST00000472523 ZNF428Q96B54 188 aa28.22■■■□□ 2.11
ZIC1-202ENST00000472523 TMX4Q9H1E5 349 aaPredicted RBP28.22■■■□□ 2.11
ZIC1-202ENST00000472523 DDX58O95786 925 aaKnown RBP28.21■■■□□ 2.11
ZIC1-202ENST00000472523 SF3B3Q15393 1217 aaKnown RBP28.21■■■□□ 2.11
ZIC1-202ENST00000472523 TWISTNBQ3B726 338 aaPredicted RBP28.21■■■□□ 2.11
ZIC1-202ENST00000472523 SP8Q8IXZ3 490 aa28.21■■■□□ 2.11
ZIC1-202ENST00000472523 ZNF541Q9H0D2 1346 aa28.2■■■□□ 2.11
ZIC1-202ENST00000472523 GRAPQ13588 217 aa28.2■■■□□ 2.1
ZIC1-202ENST00000472523 GRAPLQ8TC17 118 aaPredicted RBP28.2■■■□□ 2.1
ZIC1-202ENST00000472523 JDP2Q8WYK2 163 aa28.2■■■□□ 2.1
ZIC1-202ENST00000472523 ZBTB38Q8NAP3 1195 aaPredicted RBP28.19■■■□□ 2.1
ZIC1-202ENST00000472523 CCDC191Q8NCU4 936 aa28.19■■■□□ 2.1
ZIC1-202ENST00000472523 MYD88Q99836 296 aa28.19■■■□□ 2.1
ZIC1-202ENST00000472523 METTL22Q9BUU2 404 aaPredicted RBP28.19■■■□□ 2.1
ZIC1-202ENST00000472523 VPS33BQ9H267 617 aa28.19■■■□□ 2.1
ZIC1-202ENST00000472523 SCN4AP35499 1836 aa28.18■■■□□ 2.1
ZIC1-202ENST00000472523 IQCA1LA6NCM1 817 aa28.18■■■□□ 2.1
ZIC1-202ENST00000472523 FAM9BQ8IZU0 186 aa28.18■■■□□ 2.1
ZIC1-202ENST00000472523 STK31Q9BXU1 1019 aa28.18■■■□□ 2.1
ZIC1-202ENST00000472523 RTFDC1Q9BY42 306 aaPredicted RBP28.18■■■□□ 2.1
ZIC1-202ENST00000472523 SALL2Q9Y467 1007 aaPredicted RBP28.18■■■□□ 2.1
ZIC1-202ENST00000472523 FANCIQ9NVI1 1328 aa28.18■■■□□ 2.1
ZIC1-202ENST00000472523 TAF1P21675 1872 aa28.17■■■□□ 2.1
ZIC1-202ENST00000472523 IRS4O14654 1257 aaPredicted RBP28.17■■■□□ 2.1
ZIC1-202ENST00000472523 KSR2Q6VAB6 950 aa28.17■■■□□ 2.1
ZIC1-202ENST00000472523 TMC4Q7Z404 712 aa28.17■■■□□ 2.1
ZIC1-202ENST00000472523 COL4A5P29400 1685 aa28.16■■■□□ 2.1
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms