RNA–Protein interactions for RNA: ENST00000472490.1

BRCA1-211, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 3

Gene BRCA1, Length 561 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-211ENST00000472490 MAP3K2Q9Y2U5 619 aa18.14■□□□□ 0.49
BRCA1-211ENST00000472490 ZBED9Q6R2W3 1325 aa18.14■□□□□ 0.49
BRCA1-211ENST00000472490 HSP90B1P14625 803 aaKnown RBP18.13■□□□□ 0.49
BRCA1-211ENST00000472490 NUTM1Q86Y26 1132 aa18.13■□□□□ 0.49
BRCA1-211ENST00000472490 METTL22Q9BUU2 404 aaPredicted RBP18.13■□□□□ 0.49
BRCA1-211ENST00000472490 TRMT112Q9UI30 125 aaKnown RBP18.13■□□□□ 0.49
BRCA1-211ENST00000472490 ATP5J2-PTCD1G3V325 749 aa18.12■□□□□ 0.49
BRCA1-211ENST00000472490 YBX3P16989 372 aaKnown RBP eCLIP18.12■□□□□ 0.49
BRCA1-211ENST00000472490 ALDH1L2Q3SY69 923 aa18.12■□□□□ 0.49
BRCA1-211ENST00000472490 ERFEQ4G0M1 354 aa18.12■□□□□ 0.49
BRCA1-211ENST00000472490 TTLL6Q8N841 843 aa18.12■□□□□ 0.49
BRCA1-211ENST00000472490 CCDC191Q8NCU4 936 aa18.12■□□□□ 0.49
BRCA1-211ENST00000472490 ZNF622Q969S3 477 aaKnown RBP eCLIP18.12■□□□□ 0.49
BRCA1-211ENST00000472490 MASTLQ96GX5 879 aa18.12■□□□□ 0.49
BRCA1-211ENST00000472490 MYD88Q99836 296 aa18.12■□□□□ 0.49
BRCA1-211ENST00000472490 SH3TC1Q8TE82 1336 aa18.12■□□□□ 0.49
BRCA1-211ENST00000472490 KLRG2A4D1S0 409 aaPredicted RBP18.11■□□□□ 0.49
BRCA1-211ENST00000472490 SRGNP10124 158 aa18.11■□□□□ 0.49
BRCA1-211ENST00000472490 STYK1Q6J9G0 422 aa18.11■□□□□ 0.49
BRCA1-211ENST00000472490 G2E3Q7L622 706 aa18.11■□□□□ 0.49
BRCA1-211ENST00000472490 CNKSR1Q969H4 720 aa18.11■□□□□ 0.49
BRCA1-211ENST00000472490 NLRP3Q96P20 1036 aa18.11■□□□□ 0.49
BRCA1-211ENST00000472490 WWC3Q9ULE0 1092 aa18.11■□□□□ 0.49
BRCA1-211ENST00000472490 RIC1Q4ADV7 1423 aa18.1■□□□□ 0.49
BRCA1-211ENST00000472490 NPR1P16066 1061 aa18.1■□□□□ 0.49
BRCA1-211ENST00000472490 SLC10A5Q5PT55 438 aa18.1■□□□□ 0.49
BRCA1-211ENST00000472490 CWC25Q9NXE8 425 aaPredicted RBP18.1■□□□□ 0.49
BRCA1-211ENST00000472490 AFDNP55196 1824 aaKnown RBP18.09■□□□□ 0.49
BRCA1-211ENST00000472490 ADCY9O60503 1353 aa18.09■□□□□ 0.49
BRCA1-211ENST00000472490 ZBTB38Q8NAP3 1195 aaPredicted RBP18.09■□□□□ 0.49
BRCA1-211ENST00000472490 DNAAF4Q8WXU2 420 aa18.09■□□□□ 0.49
BRCA1-211ENST00000472490 NUP98P52948 1817 aa18.09■□□□□ 0.49
BRCA1-211ENST00000472490 PTPRCP08575 1304 aa18.08■□□□□ 0.49
BRCA1-211ENST00000472490 ALDH1B1P30837 517 aa18.08■□□□□ 0.48
BRCA1-211ENST00000472490 CRY2Q49AN0 593 aa18.08■□□□□ 0.48
BRCA1-211ENST00000472490 RPGRQ92834 1020 aaKnown RBP18.08■□□□□ 0.48
BRCA1-211ENST00000472490 ABCC12Q96J65 1359 aa18.07■□□□□ 0.48
BRCA1-211ENST00000472490 SSH1Q8WYL5 1049 aa18.07■□□□□ 0.48
BRCA1-211ENST00000472490 SMC4Q9NTJ3 1288 aa18.07■□□□□ 0.48
BRCA1-211ENST00000472490 SOGA3Q5TF21 947 aa18.06■□□□□ 0.48
BRCA1-211ENST00000472490 MRPL50Q8N5N7 158 aaKnown RBP18.06■□□□□ 0.48
BRCA1-211ENST00000472490 LINS1Q8NG48 757 aa18.06■□□□□ 0.48
BRCA1-211ENST00000472490 FAM89AQ96GI7 184 aa18.06■□□□□ 0.48
BRCA1-211ENST00000472490 RBM17Q96I25 401 aaKnown RBP18.06■□□□□ 0.48
BRCA1-211ENST00000472490 KIAA1551Q9HCM1 1747 aa18.06■□□□□ 0.48
BRCA1-211ENST00000472490 PCCAP05165 728 aaPredicted RBP18.05■□□□□ 0.48
BRCA1-211ENST00000472490 C1QBPQ07021 282 aaKnown RBP18.05■□□□□ 0.48
BRCA1-211ENST00000472490 N4BP2Q86UW6 1770 aaPredicted RBP18.04■□□□□ 0.48
BRCA1-211ENST00000472490 NEURL1BA8MQ27 555 aa18.04■□□□□ 0.48
BRCA1-211ENST00000472490 IRS4O14654 1257 aaPredicted RBP18.04■□□□□ 0.48
BRCA1-211ENST00000472490 IGKV5-2P06315 115 aa18.04■□□□□ 0.48
BRCA1-211ENST00000472490 HCLS1P14317 486 aaPredicted RBP18.04■□□□□ 0.48
BRCA1-211ENST00000472490 HOXA10P31260 410 aaPredicted RBP18.04■□□□□ 0.48
BRCA1-211ENST00000472490 PRPF40BQ6NWY9 871 aaKnown RBP18.04■□□□□ 0.48
BRCA1-211ENST00000472490 ARHGAP27Q6ZUM4 889 aa18.04■□□□□ 0.48
BRCA1-211ENST00000472490 ANKRD36CQ5JPF3 1778 aa18.04■□□□□ 0.48
BRCA1-211ENST00000472490 ARFGEF2Q9Y6D5 1785 aa18.04■□□□□ 0.48
BRCA1-211ENST00000472490 NPM3O75607 178 aaKnown RBP18.03■□□□□ 0.48
BRCA1-211ENST00000472490 BRPF1P55201 1214 aaPredicted RBP18.03■□□□□ 0.48
BRCA1-211ENST00000472490 CWF19L2Q2TBE0 894 aaKnown RBP18.03■□□□□ 0.48
BRCA1-211ENST00000472490 CRAMP1Q96RY5 1269 aa18.03■□□□□ 0.48
BRCA1-211ENST00000472490 BCL2L13Q9BXK5 485 aa18.03■□□□□ 0.48
BRCA1-211ENST00000472490 F6X3S4 739 aa18.02■□□□□ 0.48
BRCA1-211ENST00000472490 RARSP54136 660 aaKnown RBP18.02■□□□□ 0.48
BRCA1-211ENST00000472490 GCKRQ14397 625 aa18.02■□□□□ 0.48
BRCA1-211ENST00000472490 RTL5Q5HYW3 569 aaPredicted RBP18.02■□□□□ 0.48
BRCA1-211ENST00000472490 SLC4A10Q6U841 1118 aa18.02■□□□□ 0.48
BRCA1-211ENST00000472490 DDX46Q7L014 1031 aaKnown RBP18.02■□□□□ 0.48
BRCA1-211ENST00000472490 SYNE4Q8N205 404 aa18.02■□□□□ 0.48
BRCA1-211ENST00000472490 TMX4Q9H1E5 349 aaPredicted RBP18.02■□□□□ 0.48
BRCA1-211ENST00000472490 KIF16BQ96L93 1317 aa18.01■□□□□ 0.47
BRCA1-211ENST00000472490 C21orf2O43822 256 aa18.01■□□□□ 0.47
BRCA1-211ENST00000472490 BEND3Q5T5X7 828 aa18.01■□□□□ 0.47
BRCA1-211ENST00000472490 ANKRD31Q8N7Z5 1873 aa18.01■□□□□ 0.47
BRCA1-211ENST00000472490 CDHR2Q9BYE9 1310 aa18■□□□□ 0.47
BRCA1-211ENST00000472490 PDE8AO60658 829 aa18■□□□□ 0.47
BRCA1-211ENST00000472490 ALDH1L1O75891 902 aa18■□□□□ 0.47
BRCA1-211ENST00000472490 YY1P25490 414 aa18■□□□□ 0.47
BRCA1-211ENST00000472490 SF3B3Q15393 1217 aaKnown RBP18■□□□□ 0.47
BRCA1-211ENST00000472490 GRIPAP1Q4V328 841 aa18■□□□□ 0.47
BRCA1-211ENST00000472490 CC2D2BQ6DHV5 1058 aa18■□□□□ 0.47
BRCA1-211ENST00000472490 SRCIN1Q9C0H9 1055 aa18■□□□□ 0.47
BRCA1-211ENST00000472490 DLEC1Q9Y238 1755 aa17.99■□□□□ 0.47
BRCA1-211ENST00000472490 CACNA1FO60840 1977 aa17.99■□□□□ 0.47
BRCA1-211ENST00000472490 H7C1W4 665 aa17.99■□□□□ 0.47
BRCA1-211ENST00000472490 IPO8O15397 1037 aaKnown RBP17.99■□□□□ 0.47
BRCA1-211ENST00000472490 BBOX1O75936 387 aa17.99■□□□□ 0.47
BRCA1-211ENST00000472490 C3orf67Q6ZVT6 689 aa17.99■□□□□ 0.47
BRCA1-211ENST00000472490 API5Q9BZZ5 524 aaKnown RBP17.99■□□□□ 0.47
BRCA1-211ENST00000472490 CCDC152Q4G0S7 254 aa17.98■□□□□ 0.47
BRCA1-211ENST00000472490 CCDC93Q567U6 631 aa17.98■□□□□ 0.47
BRCA1-211ENST00000472490 UBE3BQ7Z3V4 1068 aa17.98■□□□□ 0.47
BRCA1-211ENST00000472490 TMC4Q7Z404 712 aa17.98■□□□□ 0.47
BRCA1-211ENST00000472490 RTKN2Q8IZC4 609 aa17.98■□□□□ 0.47
BRCA1-211ENST00000472490 ARHGAP45Q92619 1136 aa17.98■□□□□ 0.47
BRCA1-211ENST00000472490 NOB1Q9ULX3 412 aaKnown RBP17.98■□□□□ 0.47
BRCA1-211ENST00000472490 BRCA1P38398 1863 aaKnown RBP17.97■□□□□ 0.47
BRCA1-211ENST00000472490 GRAPQ13588 217 aa17.97■□□□□ 0.47
BRCA1-211ENST00000472490 GRAPLQ8TC17 118 aaPredicted RBP17.97■□□□□ 0.47
BRCA1-211ENST00000472490 C7orf43Q8WVR3 580 aa17.97■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms