RNA–Protein interactions for RNA: ENST00000472441.1

TM4SF1-202, Transcript of transmembrane 4 L six family member 1, humanhuman

TSL 2 BASIC

Gene TM4SF1, Length 3,115 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF1-202ENST00000472441 PTPN12Q05209 780 aaKnown RBP5.9□□□□□ -1.46
TM4SF1-202ENST00000472441 TFCP2Q12800 502 aa5.9□□□□□ -1.46
TM4SF1-202ENST00000472441 PARP4Q9UKK3 1724 aaKnown RBP5.9□□□□□ -1.47
TM4SF1-202ENST00000472441 SGSM2O43147 1006 aa5.9□□□□□ -1.47
TM4SF1-202ENST00000472441 SSFA2P28290 1259 aa5.9□□□□□ -1.47
TM4SF1-202ENST00000472441 TPRNQ4KMQ1 711 aa5.9□□□□□ -1.47
TM4SF1-202ENST00000472441 ZGPATQ8N5A5 531 aaKnown RBP5.9□□□□□ -1.47
TM4SF1-202ENST00000472441 EDC3Q96F86 508 aaKnown RBP5.9□□□□□ -1.47
TM4SF1-202ENST00000472441 NEUROD6Q96NK8 337 aa5.9□□□□□ -1.47
TM4SF1-202ENST00000472441 ATG3Q9NT62 314 aa5.9□□□□□ -1.47
TM4SF1-202ENST00000472441 NDUFB9Q9Y6M9 179 aa5.9□□□□□ -1.47
TM4SF1-202ENST00000472441 DDIT3P35638 169 aa5.89□□□□□ -1.47
TM4SF1-202ENST00000472441 FAM182BQ5T319 152 aa5.89□□□□□ -1.47
TM4SF1-202ENST00000472441 FOXD4L5Q5VV16 416 aaPredicted RBP5.89□□□□□ -1.47
TM4SF1-202ENST00000472441 FOXD4L4Q8WXT5 416 aaPredicted RBP5.89□□□□□ -1.47
TM4SF1-202ENST00000472441 ZNF594Q96JF6 807 aaPredicted RBP5.89□□□□□ -1.47
TM4SF1-202ENST00000472441 LARP6Q9BRS8 491 aaKnown RBP5.89□□□□□ -1.47
TM4SF1-202ENST00000472441 H7C1W4 665 aa5.89□□□□□ -1.47
TM4SF1-202ENST00000472441 STARD3NLO95772 234 aa5.89□□□□□ -1.47
TM4SF1-202ENST00000472441 KCNJ4P48050 445 aa5.89□□□□□ -1.47
TM4SF1-202ENST00000472441 RFX5P48382 616 aaPredicted RBP5.89□□□□□ -1.47
TM4SF1-202ENST00000472441 PRIM1P49642 420 aaKnown RBP5.89□□□□□ -1.47
TM4SF1-202ENST00000472441 RUFY2Q8WXA3 655 aa5.89□□□□□ -1.47
TM4SF1-202ENST00000472441 EVI5LQ96CN4 794 aa5.89□□□□□ -1.47
TM4SF1-202ENST00000472441 ACSBG1Q96GR2 724 aa5.89□□□□□ -1.47
TM4SF1-202ENST00000472441 FSD1Q9BTV5 496 aa5.89□□□□□ -1.47
TM4SF1-202ENST00000472441 CIZ1Q9ULV3 898 aaPredicted RBP5.89□□□□□ -1.47
TM4SF1-202ENST00000472441 PLEKHG2Q9H7P9 1386 aa5.89□□□□□ -1.47
TM4SF1-202ENST00000472441 ERBB4Q15303 1308 aa5.89□□□□□ -1.47
TM4SF1-202ENST00000472441 TRAK2O60296 914 aa5.88□□□□□ -1.47
TM4SF1-202ENST00000472441 GPTP24298 496 aa5.88□□□□□ -1.47
TM4SF1-202ENST00000472441 CASP7P55210 303 aa5.88□□□□□ -1.47
TM4SF1-202ENST00000472441 FOXO4P98177 505 aa5.88□□□□□ -1.47
TM4SF1-202ENST00000472441 RAB3GAP1Q15042 981 aa5.88□□□□□ -1.47
TM4SF1-202ENST00000472441 KIF6Q6ZMV9 814 aa5.88□□□□□ -1.47
TM4SF1-202ENST00000472441 FAM89AQ96GI7 184 aa5.88□□□□□ -1.47
TM4SF1-202ENST00000472441 FAM227BQ96M60 508 aa5.88□□□□□ -1.47
TM4SF1-202ENST00000472441 DNAJC2Q99543 621 aaKnown RBP5.88□□□□□ -1.47
TM4SF1-202ENST00000472441 COPRSQ9NQ92 184 aa5.88□□□□□ -1.47
TM4SF1-202ENST00000472441 AFDNP55196 1824 aaKnown RBP5.88□□□□□ -1.47
TM4SF1-202ENST00000472441 AK9Q5TCS8 1911 aa5.88□□□□□ -1.47
TM4SF1-202ENST00000472441 USP42Q9H9J4 1324 aaKnown RBP5.88□□□□□ -1.47
TM4SF1-202ENST00000472441 HSPA4P34932 840 aa5.88□□□□□ -1.47
TM4SF1-202ENST00000472441 KCNQ4P56696 695 aa5.88□□□□□ -1.47
TM4SF1-202ENST00000472441 TIMM10P62072 90 aa5.88□□□□□ -1.47
TM4SF1-202ENST00000472441 PTH1RQ03431 593 aa5.88□□□□□ -1.47
TM4SF1-202ENST00000472441 PKP1Q13835 747 aa5.88□□□□□ -1.47
TM4SF1-202ENST00000472441 TNNI3KQ59H18 835 aa5.88□□□□□ -1.47
TM4SF1-202ENST00000472441 CCDC191Q8NCU4 936 aa5.88□□□□□ -1.47
TM4SF1-202ENST00000472441 TMX3Q96JJ7 454 aa5.88□□□□□ -1.47
TM4SF1-202ENST00000472441 GBP4Q96PP9 640 aa5.88□□□□□ -1.47
TM4SF1-202ENST00000472441 DBNDD2Q9BQY9 259 aa5.88□□□□□ -1.47
TM4SF1-202ENST00000472441 LSG1Q9H089 658 aaKnown RBP5.88□□□□□ -1.47
TM4SF1-202ENST00000472441 FPGT-TNNI3KV9GXZ4 949 aa5.88□□□□□ -1.47
TM4SF1-202ENST00000472441 FAM177BA6PVY3 158 aa5.88□□□□□ -1.47
TM4SF1-202ENST00000472441 TOM1O60784 492 aa5.88□□□□□ -1.47
TM4SF1-202ENST00000472441 CPA1P15085 419 aa5.88□□□□□ -1.47
TM4SF1-202ENST00000472441 NMIQ13287 307 aaPredicted RBP5.88□□□□□ -1.47
TM4SF1-202ENST00000472441 TCIRG1Q13488 830 aa5.88□□□□□ -1.47
TM4SF1-202ENST00000472441 RABL6Q3YEC7 729 aaPredicted RBP5.88□□□□□ -1.47
TM4SF1-202ENST00000472441 LRRC24Q50LG9 513 aa5.88□□□□□ -1.47
TM4SF1-202ENST00000472441 PRPF40BQ6NWY9 871 aaKnown RBP5.88□□□□□ -1.47
TM4SF1-202ENST00000472441 RASEFQ8IZ41 740 aa5.88□□□□□ -1.47
TM4SF1-202ENST00000472441 SYNE4Q8N205 404 aa5.88□□□□□ -1.47
TM4SF1-202ENST00000472441 TEX13AQ9BXU3 409 aaPredicted RBP5.88□□□□□ -1.47
TM4SF1-202ENST00000472441 DBNLQ9UJU6 430 aaKnown RBP5.88□□□□□ -1.47
TM4SF1-202ENST00000472441 KCPQ6ZWJ8 1503 aa5.87□□□□□ -1.47
TM4SF1-202ENST00000472441 ANAPC15P60006 121 aa5.87□□□□□ -1.47
TM4SF1-202ENST00000472441 DDB1Q16531 1140 aa5.87□□□□□ -1.47
TM4SF1-202ENST00000472441 HLFQ16534 295 aa5.87□□□□□ -1.47
TM4SF1-202ENST00000472441 SMIM5Q71RC9 77 aa5.87□□□□□ -1.47
TM4SF1-202ENST00000472441 TBC1D2BQ9UPU7 963 aa5.87□□□□□ -1.47
TM4SF1-202ENST00000472441 SNX14Q9Y5W7 946 aa5.87□□□□□ -1.47
TM4SF1-202ENST00000472441 ARFGEF2Q9Y6D5 1785 aa5.87□□□□□ -1.47
TM4SF1-202ENST00000472441 RAD50Q92878 1312 aa5.87□□□□□ -1.47
TM4SF1-202ENST00000472441 DDX11L8A8MPP1 907 aa5.87□□□□□ -1.47
TM4SF1-202ENST00000472441 CCDC57Q2TAC2 916 aa5.87□□□□□ -1.47
TM4SF1-202ENST00000472441 TAF7LQ5H9L4 462 aa5.87□□□□□ -1.47
TM4SF1-202ENST00000472441 SLC4A9Q96Q91 983 aa5.87□□□□□ -1.47
TM4SF1-202ENST00000472441 PUS3Q9BZE2 481 aaKnown RBP5.87□□□□□ -1.47
TM4SF1-202ENST00000472441 THSD7AQ9UPZ6 1657 aa5.87□□□□□ -1.47
TM4SF1-202ENST00000472441 TUBGCP6Q96RT7 1819 aa5.87□□□□□ -1.47
TM4SF1-202ENST00000472441 A0A0D9SFI3 127 aa5.86□□□□□ -1.47
TM4SF1-202ENST00000472441 CHGBP05060 677 aa5.86□□□□□ -1.47
TM4SF1-202ENST00000472441 CASTP20810 708 aaKnown RBP5.86□□□□□ -1.47
TM4SF1-202ENST00000472441 NUCB2P80303 420 aa5.86□□□□□ -1.47
TM4SF1-202ENST00000472441 MCTP1Q6DN14 999 aa5.86□□□□□ -1.47
TM4SF1-202ENST00000472441 CWC22Q9HCG8 908 aaKnown RBP5.86□□□□□ -1.47
TM4SF1-202ENST00000472441 ZBTB1Q9Y2K1 713 aa5.86□□□□□ -1.47
TM4SF1-202ENST00000472441 SHANK3Q9BYB0 1731 aa5.86□□□□□ -1.47
TM4SF1-202ENST00000472441 MCM2P49736 904 aa5.86□□□□□ -1.47
TM4SF1-202ENST00000472441 FOXD4L6Q3SYB3 417 aaPredicted RBP5.86□□□□□ -1.47
TM4SF1-202ENST00000472441 FOXD4L3Q6VB84 417 aaPredicted RBP5.86□□□□□ -1.47
TM4SF1-202ENST00000472441 DDX46Q7L014 1031 aaKnown RBP5.86□□□□□ -1.47
TM4SF1-202ENST00000472441 VSIG10Q8N0Z9 540 aa5.86□□□□□ -1.47
TM4SF1-202ENST00000472441 JAKMIP1Q96N16 626 aaKnown RBP5.86□□□□□ -1.47
TM4SF1-202ENST00000472441 ISCA1Q9BUE6 129 aa5.86□□□□□ -1.47
TM4SF1-202ENST00000472441 TAOK2Q9UL54 1235 aa5.86□□□□□ -1.47
TM4SF1-202ENST00000472441 RGPD3A6NKT7 1758 aaPredicted RBP5.86□□□□□ -1.47
TM4SF1-202ENST00000472441 RGPD4Q7Z3J3 1758 aa5.86□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 7.2 ms