RNA–Protein interactions for RNA: ENST00000472103.5

SMARCD3-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 5

Gene SMARCD3, Length 798 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-207ENST00000472103 NEXNQ0ZGT2 675 aa18.59■□□□□ 0.57
SMARCD3-207ENST00000472103 PARP10Q53GL7 1025 aa18.59■□□□□ 0.57
SMARCD3-207ENST00000472103 PRR5LQ6MZQ0 368 aa18.59■□□□□ 0.57
SMARCD3-207ENST00000472103 PANK1Q8TE04 598 aa18.59■□□□□ 0.57
SMARCD3-207ENST00000472103 ANKRD31Q8N7Z5 1873 aa18.58■□□□□ 0.57
SMARCD3-207ENST00000472103 ABCC12Q96J65 1359 aa18.58■□□□□ 0.57
SMARCD3-207ENST00000472103 RRP1P56182 461 aaKnown RBP18.58■□□□□ 0.56
SMARCD3-207ENST00000472103 GCKRQ14397 625 aa18.58■□□□□ 0.56
SMARCD3-207ENST00000472103 RTL5Q5HYW3 569 aaPredicted RBP18.58■□□□□ 0.56
SMARCD3-207ENST00000472103 NBPF5PQ86XG9 351 aaPredicted RBP18.58■□□□□ 0.56
SMARCD3-207ENST00000472103 TMEM57Q8N5G2 664 aa18.58■□□□□ 0.56
SMARCD3-207ENST00000472103 CCDC191Q8NCU4 936 aa18.58■□□□□ 0.56
SMARCD3-207ENST00000472103 SRCIN1Q9C0H9 1055 aa18.58■□□□□ 0.56
SMARCD3-207ENST00000472103 CWC25Q9NXE8 425 aaPredicted RBP18.58■□□□□ 0.56
SMARCD3-207ENST00000472103 ALDH1L1O75891 902 aa18.57■□□□□ 0.56
SMARCD3-207ENST00000472103 ERFEQ4G0M1 354 aa18.57■□□□□ 0.56
SMARCD3-207ENST00000472103 INTS3Q68E01 1043 aaKnown RBP18.57■□□□□ 0.56
SMARCD3-207ENST00000472103 DZIP1LQ8IYY4 767 aaKnown RBP18.57■□□□□ 0.56
SMARCD3-207ENST00000472103 UTP14AQ9BVJ6 771 aaKnown RBP18.57■□□□□ 0.56
SMARCD3-207ENST00000472103 SUPT16HQ9Y5B9 1047 aaKnown RBP18.57■□□□□ 0.56
SMARCD3-207ENST00000472103 TNRC6CQ9HCJ0 1690 aaKnown RBP18.57■□□□□ 0.56
SMARCD3-207ENST00000472103 IBTKQ9P2D0 1353 aaPredicted RBP18.56■□□□□ 0.56
SMARCD3-207ENST00000472103 RNF123Q5XPI4 1314 aa18.56■□□□□ 0.56
SMARCD3-207ENST00000472103 CASP7P55210 303 aa18.56■□□□□ 0.56
SMARCD3-207ENST00000472103 PPP1R42Q7Z4L9 355 aa18.56■□□□□ 0.56
SMARCD3-207ENST00000472103 FAM89AQ96GI7 184 aa18.56■□□□□ 0.56
SMARCD3-207ENST00000472103 TRMT112Q9UI30 125 aaKnown RBP18.56■□□□□ 0.56
SMARCD3-207ENST00000472103 DDX60Q8IY21 1712 aaKnown RBP18.56■□□□□ 0.56
SMARCD3-207ENST00000472103 C10orf71Q711Q0 1435 aa18.56■□□□□ 0.56
SMARCD3-207ENST00000472103 H7C1W4 665 aa18.55■□□□□ 0.56
SMARCD3-207ENST00000472103 PCCAP05165 728 aaPredicted RBP18.55■□□□□ 0.56
SMARCD3-207ENST00000472103 CNBD1Q8NA66 436 aa18.55■□□□□ 0.56
SMARCD3-207ENST00000472103 LRP5O75197 1615 aa18.55■□□□□ 0.56
SMARCD3-207ENST00000472103 KIF13BQ9NQT8 1826 aa18.54■□□□□ 0.56
SMARCD3-207ENST00000472103 CCT4P50991 539 aaKnown RBP18.54■□□□□ 0.56
SMARCD3-207ENST00000472103 TPTE2Q6XPS3 522 aa18.54■□□□□ 0.56
SMARCD3-207ENST00000472103 C3orf67Q6ZVT6 689 aa18.54■□□□□ 0.56
SMARCD3-207ENST00000472103 ZBTB38Q8NAP3 1195 aaPredicted RBP18.54■□□□□ 0.56
SMARCD3-207ENST00000472103 KIAA1551Q9HCM1 1747 aa18.54■□□□□ 0.56
SMARCD3-207ENST00000472103 LAMB2P55268 1798 aa18.53■□□□□ 0.56
SMARCD3-207ENST00000472103 HCLS1P14317 486 aaPredicted RBP18.53■□□□□ 0.56
SMARCD3-207ENST00000472103 UBE3BQ7Z3V4 1068 aa18.53■□□□□ 0.56
SMARCD3-207ENST00000472103 FTSJ3Q8IY81 847 aaKnown RBP18.53■□□□□ 0.56
SMARCD3-207ENST00000472103 NYXQ9GZU5 481 aa18.53■□□□□ 0.56
SMARCD3-207ENST00000472103 USP44Q9H0E7 712 aa18.53■□□□□ 0.56
SMARCD3-207ENST00000472103 SH3TC1Q8TE82 1336 aa18.52■□□□□ 0.56
SMARCD3-207ENST00000472103 GRM8O00222 908 aa18.52■□□□□ 0.56
SMARCD3-207ENST00000472103 NBPF7P0C2Y1 421 aaPredicted RBP18.52■□□□□ 0.56
SMARCD3-207ENST00000472103 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.52■□□□□ 0.56
SMARCD3-207ENST00000472103 MEIS3Q99687 375 aa18.52■□□□□ 0.56
SMARCD3-207ENST00000472103 COG6Q9Y2V7 657 aa18.52■□□□□ 0.56
SMARCD3-207ENST00000472103 IRS4O14654 1257 aaPredicted RBP18.51■□□□□ 0.55
SMARCD3-207ENST00000472103 NPHP1O15259 732 aa18.51■□□□□ 0.55
SMARCD3-207ENST00000472103 GTF2E1P29083 439 aaPredicted RBP18.51■□□□□ 0.55
SMARCD3-207ENST00000472103 ST5P78524 1137 aa18.51■□□□□ 0.55
SMARCD3-207ENST00000472103 SLC10A5Q5PT55 438 aa18.51■□□□□ 0.55
SMARCD3-207ENST00000472103 KLHL34Q8N239 644 aa18.51■□□□□ 0.55
SMARCD3-207ENST00000472103 SUCLG2Q96I99 432 aa18.51■□□□□ 0.55
SMARCD3-207ENST00000472103 COL11A2P13942 1736 aaPredicted RBP18.51■□□□□ 0.55
SMARCD3-207ENST00000472103 UTYO14607 1347 aa18.5■□□□□ 0.55
SMARCD3-207ENST00000472103 CDHR2Q9BYE9 1310 aa18.5■□□□□ 0.55
SMARCD3-207ENST00000472103 PDE3AQ14432 1141 aa18.5■□□□□ 0.55
SMARCD3-207ENST00000472103 EPHA10Q5JZY3 1008 aa18.5■□□□□ 0.55
SMARCD3-207ENST00000472103 ITPRIPQ8IWB1 547 aa18.5■□□□□ 0.55
SMARCD3-207ENST00000472103 C9orf78Q9NZ63 289 aaPredicted RBP18.5■□□□□ 0.55
SMARCD3-207ENST00000472103 NLGN2Q8NFZ4 835 aa18.49■□□□□ 0.55
SMARCD3-207ENST00000472103 KAZALD1Q96I82 304 aa18.49■□□□□ 0.55
SMARCD3-207ENST00000472103 FHDC1Q9C0D6 1143 aaPredicted RBP18.49■□□□□ 0.55
SMARCD3-207ENST00000472103 PPP1R1BQ9UD71 204 aaPredicted RBP18.49■□□□□ 0.55
SMARCD3-207ENST00000472103 RIC1Q4ADV7 1423 aa18.49■□□□□ 0.55
SMARCD3-207ENST00000472103 CHRNA5P30532 468 aa18.48■□□□□ 0.55
SMARCD3-207ENST00000472103 MVPQ14764 893 aaKnown RBP18.48■□□□□ 0.55
SMARCD3-207ENST00000472103 BRIP1Q9BX63 1249 aa18.48■□□□□ 0.55
SMARCD3-207ENST00000472103 COL4A1P02462 1669 aa18.47■□□□□ 0.55
SMARCD3-207ENST00000472103 ZBTB7BO15156 539 aaPredicted RBP18.47■□□□□ 0.55
SMARCD3-207ENST00000472103 CENPBP07199 599 aaPredicted RBP18.47■□□□□ 0.55
SMARCD3-207ENST00000472103 MS4A1P11836 297 aa18.47■□□□□ 0.55
SMARCD3-207ENST00000472103 MYH3P11055 1940 aa18.47■□□□□ 0.55
SMARCD3-207ENST00000472103 TAF1P21675 1872 aa18.46■□□□□ 0.55
SMARCD3-207ENST00000472103 KLRG2A4D1S0 409 aaPredicted RBP18.46■□□□□ 0.55
SMARCD3-207ENST00000472103 FOXO4P98177 505 aa18.46■□□□□ 0.55
SMARCD3-207ENST00000472103 CRBNQ96SW2 442 aa18.46■□□□□ 0.55
SMARCD3-207ENST00000472103 PLA2G12BQ9BX93 195 aa18.46■□□□□ 0.55
SMARCD3-207ENST00000472103 CD2APQ9Y5K6 639 aa18.46■□□□□ 0.55
SMARCD3-207ENST00000472103 A0A0G2JLW4 131 aa18.45■□□□□ 0.54
SMARCD3-207ENST00000472103 PDE8AO60658 829 aa18.45■□□□□ 0.54
SMARCD3-207ENST00000472103 DPEP1P16444 411 aa18.45■□□□□ 0.54
SMARCD3-207ENST00000472103 KCNA3P22001 575 aa18.45■□□□□ 0.54
SMARCD3-207ENST00000472103 IRX6P78412 446 aaPredicted RBP18.45■□□□□ 0.54
SMARCD3-207ENST00000472103 CCDC85AQ96PX6 553 aaPredicted RBP18.45■□□□□ 0.54
SMARCD3-207ENST00000472103 UBTFL1P0CB47 393 aaPredicted RBP18.44■□□□□ 0.54
SMARCD3-207ENST00000472103 C2CD5Q86YS7 1000 aa18.44■□□□□ 0.54
SMARCD3-207ENST00000472103 ANKRD44Q8N8A2 993 aa18.44■□□□□ 0.54
SMARCD3-207ENST00000472103 NLRP3Q96P20 1036 aa18.44■□□□□ 0.54
SMARCD3-207ENST00000472103 SYT17Q9BSW7 474 aa18.44■□□□□ 0.54
SMARCD3-207ENST00000472103 C1orf115Q9H7X2 142 aa18.44■□□□□ 0.54
SMARCD3-207ENST00000472103 LRRFIP2Q9Y608 721 aaKnown RBP18.44■□□□□ 0.54
SMARCD3-207ENST00000472103 DLEC1Q9Y238 1755 aa18.44■□□□□ 0.54
SMARCD3-207ENST00000472103 SRGNP10124 158 aa18.43■□□□□ 0.54
SMARCD3-207ENST00000472103 PDE6BP35913 854 aa18.43■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms