RNA–Protein interactions for RNA: ENST00000471582.5

COL20A1-205, Transcript of collagen type XX alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL20A1, Length 1,924 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1-205ENST00000471582 ISY1Q9ULR0 285 aaKnown RBP22.54■■□□□ 1.2
COL20A1-205ENST00000471582 ZGPATQ8N5A5 531 aaKnown RBP22.53■■□□□ 1.2
COL20A1-205ENST00000471582 EAF2Q96CJ1 260 aaPredicted RBP22.53■■□□□ 1.2
COL20A1-205ENST00000471582 THRAP3Q9Y2W1 955 aaKnown RBP22.53■■□□□ 1.2
COL20A1-205ENST00000471582 SPATA31A6Q5VVP1 1343 aa22.53■■□□□ 1.2
COL20A1-205ENST00000471582 NUP188Q5SRE5 1749 aa22.53■■□□□ 1.2
COL20A1-205ENST00000471582 EPHA10Q5JZY3 1008 aa22.53■■□□□ 1.2
COL20A1-205ENST00000471582 CDCA7Q9BWT1 371 aaPredicted RBP22.53■■□□□ 1.2
COL20A1-205ENST00000471582 SPATA31A1Q5TZJ5 1347 aa22.52■■□□□ 1.2
COL20A1-205ENST00000471582 GOLGA6L3A6NEY3 463 aa22.52■■□□□ 1.2
COL20A1-205ENST00000471582 HIP1O00291 1037 aa22.52■■□□□ 1.2
COL20A1-205ENST00000471582 TOGARAM1Q9Y4F4 1720 aa22.51■■□□□ 1.19
COL20A1-205ENST00000471582 CWC27Q6UX04 472 aaKnown RBP22.51■■□□□ 1.19
COL20A1-205ENST00000471582 PIP4K2AP48426 406 aaPredicted RBP22.51■■□□□ 1.19
COL20A1-205ENST00000471582 GZF1Q9H116 711 aaPredicted RBP22.51■■□□□ 1.19
COL20A1-205ENST00000471582 TMOD3Q9NYL9 352 aa22.51■■□□□ 1.19
COL20A1-205ENST00000471582 NBPF26B4DH59 902 aa22.5■■□□□ 1.19
COL20A1-205ENST00000471582 RFX5P48382 616 aaPredicted RBP22.5■■□□□ 1.19
COL20A1-205ENST00000471582 NBPF14Q5TI25 921 aa22.5■■□□□ 1.19
COL20A1-205ENST00000471582 NBPF10Q6P3W6 841 aaKnown RBP22.5■■□□□ 1.19
COL20A1-205ENST00000471582 NBPF15Q8N660 670 aa22.5■■□□□ 1.19
COL20A1-205ENST00000471582 CASP7P55210 303 aa22.49■■□□□ 1.19
COL20A1-205ENST00000471582 UBE3BQ7Z3V4 1068 aa22.49■■□□□ 1.19
COL20A1-205ENST00000471582 BRPF3Q9ULD4 1205 aa22.49■■□□□ 1.19
COL20A1-205ENST00000471582 SNX14Q9Y5W7 946 aa22.49■■□□□ 1.19
COL20A1-205ENST00000471582 A0A087WZG4 1122 aa22.49■■□□□ 1.19
COL20A1-205ENST00000471582 SIL1Q9H173 461 aa22.49■■□□□ 1.19
COL20A1-205ENST00000471582 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP22.49■■□□□ 1.19
COL20A1-205ENST00000471582 SPATA31A5Q5VU36 1347 aa22.49■■□□□ 1.19
COL20A1-205ENST00000471582 SPATA31A7Q8IWB4 1347 aa22.49■■□□□ 1.19
COL20A1-205ENST00000471582 UPF3BQ9BZI7 483 aaKnown RBP22.48■■□□□ 1.19
COL20A1-205ENST00000471582 SNRKQ9NRH2 765 aa22.48■■□□□ 1.19
COL20A1-205ENST00000471582 PTPN12Q05209 780 aaKnown RBP22.47■■□□□ 1.19
COL20A1-205ENST00000471582 PKP1Q13835 747 aa22.47■■□□□ 1.19
COL20A1-205ENST00000471582 EXOC5O00471 708 aa22.47■■□□□ 1.19
COL20A1-205ENST00000471582 KLHDC4Q8TBB5 520 aa22.47■■□□□ 1.19
COL20A1-205ENST00000471582 CCDC8Q9H0W5 538 aaPredicted RBP22.47■■□□□ 1.19
COL20A1-205ENST00000471582 TJP1Q07157 1748 aa22.46■■□□□ 1.19
COL20A1-205ENST00000471582 LRP6O75581 1613 aa22.46■■□□□ 1.19
COL20A1-205ENST00000471582 ATP5J2-PTCD1G3V325 749 aa22.46■■□□□ 1.19
COL20A1-205ENST00000471582 H7C1W4 665 aa22.46■■□□□ 1.19
COL20A1-205ENST00000471582 PTCD1O75127 700 aaKnown RBP22.46■■□□□ 1.19
COL20A1-205ENST00000471582 KLHL40Q2TBA0 621 aa22.46■■□□□ 1.19
COL20A1-205ENST00000471582 KCNB2Q92953 911 aa22.46■■□□□ 1.19
COL20A1-205ENST00000471582 ZDHHC9Q9Y397 364 aa22.46■■□□□ 1.19
COL20A1-205ENST00000471582 ITGB4P16144 1822 aa22.46■■□□□ 1.19
COL20A1-205ENST00000471582 C8orf37Q96NL8 207 aa22.45■■□□□ 1.18
COL20A1-205ENST00000471582 TLR7Q9NYK1 1049 aaKnown RBP22.45■■□□□ 1.18
COL20A1-205ENST00000471582 NGLY1Q96IV0 654 aa22.45■■□□□ 1.18
COL20A1-205ENST00000471582 TTC14Q96N46 770 aa22.45■■□□□ 1.18
COL20A1-205ENST00000471582 BARGINQ6ZT62 677 aa22.44■■□□□ 1.18
COL20A1-205ENST00000471582 RASEFQ8IZ41 740 aa22.44■■□□□ 1.18
COL20A1-205ENST00000471582 CWC25Q9NXE8 425 aaPredicted RBP22.44■■□□□ 1.18
COL20A1-205ENST00000471582 BCL9LQ86UU0 1499 aa22.44■■□□□ 1.18
COL20A1-205ENST00000471582 MRE11P49959 708 aa22.43■■□□□ 1.18
COL20A1-205ENST00000471582 RFX7Q2KHR2 1363 aa22.43■■□□□ 1.18
COL20A1-205ENST00000471582 CCDC171Q6TFL3 1326 aa22.43■■□□□ 1.18
COL20A1-205ENST00000471582 ATP5JP18859 108 aa22.43■■□□□ 1.18
COL20A1-205ENST00000471582 TNNI3KQ59H18 835 aa22.43■■□□□ 1.18
COL20A1-205ENST00000471582 FNBP4Q8N3X1 1017 aaPredicted RBP22.43■■□□□ 1.18
COL20A1-205ENST00000471582 CCDC191Q8NCU4 936 aa22.43■■□□□ 1.18
COL20A1-205ENST00000471582 TM6SF1Q9BZW5 370 aa22.43■■□□□ 1.18
COL20A1-205ENST00000471582 FPGT-TNNI3KV9GXZ4 949 aa22.43■■□□□ 1.18
COL20A1-205ENST00000471582 MCTP1Q6DN14 999 aa22.42■■□□□ 1.18
COL20A1-205ENST00000471582 TTLL7Q6ZT98 887 aa22.42■■□□□ 1.18
COL20A1-205ENST00000471582 CCDC9Q9Y3X0 531 aaKnown RBP22.42■■□□□ 1.18
COL20A1-205ENST00000471582 BRD1O95696 1058 aa22.41■■□□□ 1.18
COL20A1-205ENST00000471582 A1BGP04217 495 aa22.41■■□□□ 1.18
COL20A1-205ENST00000471582 TEX13AQ9BXU3 409 aaPredicted RBP22.41■■□□□ 1.18
COL20A1-205ENST00000471582 TNKS1BP1Q9C0C2 1729 aaKnown RBP22.41■■□□□ 1.18
COL20A1-205ENST00000471582 XRCC6P12956 609 aaKnown RBP eCLIP22.41■■□□□ 1.18
COL20A1-205ENST00000471582 FOXO4P98177 505 aa22.41■■□□□ 1.18
COL20A1-205ENST00000471582 PTH1RQ03431 593 aa22.41■■□□□ 1.18
COL20A1-205ENST00000471582 VPS72Q15906 364 aa22.41■■□□□ 1.18
COL20A1-205ENST00000471582 VSIG10Q8N0Z9 540 aa22.41■■□□□ 1.18
COL20A1-205ENST00000471582 PIGBQ92521 554 aa22.41■■□□□ 1.18
COL20A1-205ENST00000471582 JARID2Q92833 1246 aaPredicted RBP22.41■■□□□ 1.18
COL20A1-205ENST00000471582 BOLA2Q9H3K6 86 aa22.41■■□□□ 1.18
COL20A1-205ENST00000471582 TFCP2Q12800 502 aa22.4■■□□□ 1.18
COL20A1-205ENST00000471582 NMIQ13287 307 aaPredicted RBP22.4■■□□□ 1.18
COL20A1-205ENST00000471582 NECTIN1Q15223 517 aa22.4■■□□□ 1.18
COL20A1-205ENST00000471582 DDB1Q16531 1140 aa22.4■■□□□ 1.18
COL20A1-205ENST00000471582 LMBR1LQ6UX01 489 aa22.4■■□□□ 1.18
COL20A1-205ENST00000471582 FSD1Q9BTV5 496 aa22.4■■□□□ 1.18
COL20A1-205ENST00000471582 LMBRD1Q9NUN5 540 aa22.4■■□□□ 1.18
COL20A1-205ENST00000471582 DBNLQ9UJU6 430 aaKnown RBP22.4■■□□□ 1.18
COL20A1-205ENST00000471582 DDX49Q9Y6V7 483 aaKnown RBP22.4■■□□□ 1.18
COL20A1-205ENST00000471582 MED23Q9ULK4 1368 aa22.4■■□□□ 1.18
COL20A1-205ENST00000471582 MAP4K1Q92918 833 aa22.39■■□□□ 1.18
COL20A1-205ENST00000471582 LIMCH1Q9UPQ0 1083 aa22.39■■□□□ 1.17
COL20A1-205ENST00000471582 KAT6BQ8WYB5 2073 aa22.38■■□□□ 1.17
COL20A1-205ENST00000471582 ZKSCAN1P17029 563 aaPredicted RBP22.38■■□□□ 1.17
COL20A1-205ENST00000471582 NOL8Q76FK4 1167 aaKnown RBP22.38■■□□□ 1.17
COL20A1-205ENST00000471582 FAM227BQ96M60 508 aa22.38■■□□□ 1.17
COL20A1-205ENST00000471582 BCL9O00512 1426 aa22.38■■□□□ 1.17
COL20A1-205ENST00000471582 AK2P54819 239 aa22.37■■□□□ 1.17
COL20A1-205ENST00000471582 VPS53Q5VIR6 699 aa22.37■■□□□ 1.17
COL20A1-205ENST00000471582 ZSWIM6Q9HCJ5 1215 aa22.37■■□□□ 1.17
COL20A1-205ENST00000471582 GPR108Q9NPR9 543 aa22.37■■□□□ 1.17
COL20A1-205ENST00000471582 ASAP1Q9ULH1 1129 aa22.37■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms