RNA–Protein interactions for RNA: ENST00000471427.1

POLR1A-206, Transcript of RNA polymerase I subunit A, humanhuman

TSL 2

Gene POLR1A, Length 290 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1A-206ENST00000471427 CRAMP1Q96RY5 1269 aa12.48□□□□□ -0.41
POLR1A-206ENST00000471427 UTP14AQ9BVJ6 771 aaKnown RBP12.48□□□□□ -0.41
POLR1A-206ENST00000471427 RRAGCQ9HB90 399 aa12.48□□□□□ -0.41
POLR1A-206ENST00000471427 HYPKQ9NX55 129 aa12.48□□□□□ -0.41
POLR1A-206ENST00000471427 CEP350Q5VT06 3117 aa12.47□□□□□ -0.41
POLR1A-206ENST00000471427 SLX4Q8IY92 1834 aa12.47□□□□□ -0.41
POLR1A-206ENST00000471427 ANP32CO43423 234 aa12.47□□□□□ -0.41
POLR1A-206ENST00000471427 VEGFAP15692 232 aaPredicted RBP12.47□□□□□ -0.41
POLR1A-206ENST00000471427 FSTL1Q12841 308 aa12.47□□□□□ -0.41
POLR1A-206ENST00000471427 TRIM28Q13263 835 aaKnown RBP12.47□□□□□ -0.41
POLR1A-206ENST00000471427 ANKRD13DQ6ZTN6 518 aa12.47□□□□□ -0.41
POLR1A-206ENST00000471427 NLRP10Q86W26 655 aa12.47□□□□□ -0.41
POLR1A-206ENST00000471427 PLBD2Q8NHP8 589 aa12.47□□□□□ -0.41
POLR1A-206ENST00000471427 NECTIN2Q92692 538 aa12.47□□□□□ -0.41
POLR1A-206ENST00000471427 NLRP3Q96P20 1036 aa12.47□□□□□ -0.41
POLR1A-206ENST00000471427 CHPF2Q9P2E5 772 aa12.47□□□□□ -0.41
POLR1A-206ENST00000471427 ZNF219Q9P2Y4 722 aaPredicted RBP12.47□□□□□ -0.41
POLR1A-206ENST00000471427 FKBP4Q02790 459 aaKnown RBP eCLIP12.46□□□□□ -0.41
POLR1A-206ENST00000471427 AIMP1Q12904 312 aaKnown RBP12.46□□□□□ -0.41
POLR1A-206ENST00000471427 RBM17Q96I25 401 aaKnown RBP12.46□□□□□ -0.41
POLR1A-206ENST00000471427 FER1L6Q2WGJ9 1857 aa12.46□□□□□ -0.42
POLR1A-206ENST00000471427 COL11A2P13942 1736 aaPredicted RBP12.45□□□□□ -0.42
POLR1A-206ENST00000471427 ABCC12Q96J65 1359 aa12.45□□□□□ -0.42
POLR1A-206ENST00000471427 C16orf71Q8IYS4 520 aaPredicted RBP12.45□□□□□ -0.42
POLR1A-206ENST00000471427 RPGRQ92834 1020 aaKnown RBP12.45□□□□□ -0.42
POLR1A-206ENST00000471427 PSMD1Q99460 953 aa12.45□□□□□ -0.42
POLR1A-206ENST00000471427 POTECB2RU33 542 aa12.44□□□□□ -0.42
POLR1A-206ENST00000471427 BBOX1O75936 387 aa12.44□□□□□ -0.42
POLR1A-206ENST00000471427 APLP1P51693 650 aa12.44□□□□□ -0.42
POLR1A-206ENST00000471427 WWC1Q8IX03 1113 aa12.44□□□□□ -0.42
POLR1A-206ENST00000471427 ISCA1Q9BUE6 129 aa12.44□□□□□ -0.42
POLR1A-206ENST00000471427 IL16Q14005 1332 aa12.43□□□□□ -0.42
POLR1A-206ENST00000471427 SYNE4Q8N205 404 aa12.43□□□□□ -0.42
POLR1A-206ENST00000471427 C8orf58Q8NAV2 365 aa12.43□□□□□ -0.42
POLR1A-206ENST00000471427 VPS33BQ9H267 617 aa12.43□□□□□ -0.42
POLR1A-206ENST00000471427 MRS2Q9HD23 443 aa12.43□□□□□ -0.42
POLR1A-206ENST00000471427 TRMT112Q9UI30 125 aaKnown RBP12.43□□□□□ -0.42
POLR1A-206ENST00000471427 CCDC88AQ3V6T2 1871 aa12.42□□□□□ -0.42
POLR1A-206ENST00000471427 SH3TC1Q8TE82 1336 aa12.42□□□□□ -0.42
POLR1A-206ENST00000471427 CCDC30Q5VVM6 783 aa12.42□□□□□ -0.42
POLR1A-206ENST00000471427 OLFM4Q6UX06 510 aa12.42□□□□□ -0.42
POLR1A-206ENST00000471427 C3orf67Q6ZVT6 689 aa12.42□□□□□ -0.42
POLR1A-206ENST00000471427 SMC1BQ8NDV3 1235 aa12.42□□□□□ -0.42
POLR1A-206ENST00000471427 ARFGEF2Q9Y6D5 1785 aa12.42□□□□□ -0.42
POLR1A-206ENST00000471427 SNED1Q8TER0 1413 aa12.42□□□□□ -0.42
POLR1A-206ENST00000471427 DICER1Q9UPY3 1922 aaKnown RBP12.42□□□□□ -0.42
POLR1A-206ENST00000471427 FZD9O00144 591 aa12.41□□□□□ -0.42
POLR1A-206ENST00000471427 ELL2O00472 640 aaPredicted RBP12.41□□□□□ -0.42
POLR1A-206ENST00000471427 IARSP41252 1262 aaKnown RBP12.41□□□□□ -0.42
POLR1A-206ENST00000471427 WDR63Q8IWG1 891 aa12.41□□□□□ -0.42
POLR1A-206ENST00000471427 L3MBTL3Q96JM7 780 aaPredicted RBP12.41□□□□□ -0.42
POLR1A-206ENST00000471427 ZNF277Q9NRM2 450 aaPredicted RBP12.41□□□□□ -0.42
POLR1A-206ENST00000471427 ATP6V0A2Q9Y487 856 aa12.41□□□□□ -0.42
POLR1A-206ENST00000471427 DDNO94850 711 aaPredicted RBP12.4□□□□□ -0.42
POLR1A-206ENST00000471427 HCLS1P14317 486 aaPredicted RBP12.4□□□□□ -0.42
POLR1A-206ENST00000471427 SF3B3Q15393 1217 aaKnown RBP12.4□□□□□ -0.42
POLR1A-206ENST00000471427 RIC3Q7Z5B4 369 aa12.4□□□□□ -0.42
POLR1A-206ENST00000471427 SP8Q8IXZ3 490 aa12.4□□□□□ -0.42
POLR1A-206ENST00000471427 DNAJC5GQ8N7S2 189 aa12.4□□□□□ -0.42
POLR1A-206ENST00000471427 RTFDC1Q9BY42 306 aaPredicted RBP12.4□□□□□ -0.42
POLR1A-206ENST00000471427 TMX4Q9H1E5 349 aaPredicted RBP12.4□□□□□ -0.42
POLR1A-206ENST00000471427 PPEF1O14829 653 aaPredicted RBP12.39□□□□□ -0.43
POLR1A-206ENST00000471427 HSP90B1P14625 803 aaKnown RBP12.39□□□□□ -0.43
POLR1A-206ENST00000471427 GOLGA2Q08379 1002 aa12.39□□□□□ -0.43
POLR1A-206ENST00000471427 DDX46Q7L014 1031 aaKnown RBP12.39□□□□□ -0.43
POLR1A-206ENST00000471427 TMC4Q7Z404 712 aa12.39□□□□□ -0.43
POLR1A-206ENST00000471427 TSPYL6Q8N831 410 aa12.39□□□□□ -0.43
POLR1A-206ENST00000471427 JDP2Q8WYK2 163 aa12.39□□□□□ -0.43
POLR1A-206ENST00000471427 PHAXQ9H814 394 aaKnown RBP12.39□□□□□ -0.43
POLR1A-206ENST00000471427 TNRC6CQ9HCJ0 1690 aaKnown RBP12.38□□□□□ -0.43
POLR1A-206ENST00000471427 WDR90Q96KV7 1748 aa12.38□□□□□ -0.43
POLR1A-206ENST00000471427 IQCA1LA6NCM1 817 aa12.38□□□□□ -0.43
POLR1A-206ENST00000471427 ATP5J2-PTCD1G3V325 749 aa12.38□□□□□ -0.43
POLR1A-206ENST00000471427 DDX58O95786 925 aaKnown RBP12.38□□□□□ -0.43
POLR1A-206ENST00000471427 GRAPQ13588 217 aa12.38□□□□□ -0.43
POLR1A-206ENST00000471427 ZBTB38Q8NAP3 1195 aaPredicted RBP12.38□□□□□ -0.43
POLR1A-206ENST00000471427 CCDC191Q8NCU4 936 aa12.38□□□□□ -0.43
POLR1A-206ENST00000471427 GRAPLQ8TC17 118 aaPredicted RBP12.38□□□□□ -0.43
POLR1A-206ENST00000471427 FAM89AQ96GI7 184 aa12.38□□□□□ -0.43
POLR1A-206ENST00000471427 ABCC4O15439 1325 aa12.37□□□□□ -0.43
POLR1A-206ENST00000471427 KSR2Q6VAB6 950 aa12.37□□□□□ -0.43
POLR1A-206ENST00000471427 GPC2Q8N158 579 aa12.37□□□□□ -0.43
POLR1A-206ENST00000471427 SUPT20HQ8NEM7 779 aa12.37□□□□□ -0.43
POLR1A-206ENST00000471427 METTL22Q9BUU2 404 aaPredicted RBP12.37□□□□□ -0.43
POLR1A-206ENST00000471427 TWISTNBQ3B726 338 aaPredicted RBP12.36□□□□□ -0.43
POLR1A-206ENST00000471427 TSR2Q969E8 191 aaKnown RBP12.36□□□□□ -0.43
POLR1A-206ENST00000471427 IRS4O14654 1257 aaPredicted RBP12.35□□□□□ -0.43
POLR1A-206ENST00000471427 PCCAP05165 728 aaPredicted RBP12.35□□□□□ -0.43
POLR1A-206ENST00000471427 EIF6P56537 245 aaKnown RBP12.35□□□□□ -0.43
POLR1A-206ENST00000471427 LARGE2Q8N3Y3 721 aa12.35□□□□□ -0.43
POLR1A-206ENST00000471427 MPNDQ8N594 471 aa12.35□□□□□ -0.43
POLR1A-206ENST00000471427 STK31Q9BXU1 1019 aa12.35□□□□□ -0.43
POLR1A-206ENST00000471427 TAF1DQ9H5J8 278 aaPredicted RBP12.35□□□□□ -0.43
POLR1A-206ENST00000471427 CACNA1SQ13698 1873 aa12.35□□□□□ -0.43
POLR1A-206ENST00000471427 ZNF541Q9H0D2 1346 aa12.35□□□□□ -0.43
POLR1A-206ENST00000471427 ANKRD36CQ5JPF3 1778 aa12.34□□□□□ -0.43
POLR1A-206ENST00000471427 PI4KAP2A4QPH2 592 aa12.34□□□□□ -0.43
POLR1A-206ENST00000471427 TCERG1O14776 1098 aaKnown RBP12.34□□□□□ -0.43
POLR1A-206ENST00000471427 VAMP4O75379 141 aa12.34□□□□□ -0.43
POLR1A-206ENST00000471427 SLC4A2P04920 1241 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms