RNA–Protein interactions for RNA: ENST00000471260.1

HMGN1-211, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 615 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-211ENST00000471260 CC2D2BQ6DHV5 1058 aa17.54■□□□□ 0.4
HMGN1-211ENST00000471260 XAGE3Q8WTP9 111 aa17.54■□□□□ 0.4
HMGN1-211ENST00000471260 DBF4Q9UBU7 674 aaPredicted RBP17.54■□□□□ 0.4
HMGN1-211ENST00000471260 DICER1Q9UPY3 1922 aaKnown RBP17.54■□□□□ 0.4
HMGN1-211ENST00000471260 ABCC12Q96J65 1359 aa17.53■□□□□ 0.4
HMGN1-211ENST00000471260 ANXA1P04083 346 aa17.53■□□□□ 0.4
HMGN1-211ENST00000471260 KRT24Q2M2I5 525 aa17.53■□□□□ 0.4
HMGN1-211ENST00000471260 SLC10A5Q5PT55 438 aa17.53■□□□□ 0.4
HMGN1-211ENST00000471260 UTP14AQ9BVJ6 771 aaKnown RBP17.53■□□□□ 0.4
HMGN1-211ENST00000471260 CHMP4AQ9BY43 222 aa17.53■□□□□ 0.4
HMGN1-211ENST00000471260 MBIPQ9NS73 344 aa17.53■□□□□ 0.4
HMGN1-211ENST00000471260 CACNA1SQ13698 1873 aa17.52■□□□□ 0.4
HMGN1-211ENST00000471260 APLP1P51693 650 aa17.52■□□□□ 0.4
HMGN1-211ENST00000471260 FKBP4Q02790 459 aaKnown RBP eCLIP17.52■□□□□ 0.4
HMGN1-211ENST00000471260 AIMP1Q12904 312 aaKnown RBP17.52■□□□□ 0.4
HMGN1-211ENST00000471260 TCIRG1Q13488 830 aa17.52■□□□□ 0.4
HMGN1-211ENST00000471260 DUSP27Q5VZP5 1158 aa17.52■□□□□ 0.4
HMGN1-211ENST00000471260 NECTIN2Q92692 538 aa17.52■□□□□ 0.4
HMGN1-211ENST00000471260 RPGRQ92834 1020 aaKnown RBP17.52■□□□□ 0.4
HMGN1-211ENST00000471260 RBM17Q96I25 401 aaKnown RBP17.52■□□□□ 0.4
HMGN1-211ENST00000471260 NLRP3Q96P20 1036 aa17.52■□□□□ 0.4
HMGN1-211ENST00000471260 CRAMP1Q96RY5 1269 aa17.52■□□□□ 0.4
HMGN1-211ENST00000471260 HYPKQ9NX55 129 aa17.52■□□□□ 0.4
HMGN1-211ENST00000471260 CHPF2Q9P2E5 772 aa17.52■□□□□ 0.4
HMGN1-211ENST00000471260 TIAM2Q8IVF5 1701 aa17.51■□□□□ 0.39
HMGN1-211ENST00000471260 NCBP3Q53F19 620 aaKnown RBP17.5■□□□□ 0.39
HMGN1-211ENST00000471260 SMC1BQ8NDV3 1235 aa17.5■□□□□ 0.39
HMGN1-211ENST00000471260 PLBD2Q8NHP8 589 aa17.5■□□□□ 0.39
HMGN1-211ENST00000471260 PSMD1Q99460 953 aa17.5■□□□□ 0.39
HMGN1-211ENST00000471260 ANP32CO43423 234 aa17.49■□□□□ 0.39
HMGN1-211ENST00000471260 CCDC27Q2M243 656 aa17.49■□□□□ 0.39
HMGN1-211ENST00000471260 ANKRD13DQ6ZTN6 518 aa17.49■□□□□ 0.39
HMGN1-211ENST00000471260 NLRP10Q86W26 655 aa17.49■□□□□ 0.39
HMGN1-211ENST00000471260 WDR90Q96KV7 1748 aa17.48■□□□□ 0.39
HMGN1-211ENST00000471260 TRMT112Q9UI30 125 aaKnown RBP17.47■□□□□ 0.39
HMGN1-211ENST00000471260 SH3TC1Q8TE82 1336 aa17.47■□□□□ 0.39
HMGN1-211ENST00000471260 ANKRD36CQ5JPF3 1778 aa17.46■□□□□ 0.39
HMGN1-211ENST00000471260 POTECB2RU33 542 aa17.46■□□□□ 0.39
HMGN1-211ENST00000471260 IARSP41252 1262 aaKnown RBP17.46■□□□□ 0.39
HMGN1-211ENST00000471260 CCDC184Q52MB2 194 aa17.46■□□□□ 0.39
HMGN1-211ENST00000471260 SYNE4Q8N205 404 aa17.46■□□□□ 0.39
HMGN1-211ENST00000471260 TMX4Q9H1E5 349 aaPredicted RBP17.46■□□□□ 0.39
HMGN1-211ENST00000471260 ZNF277Q9NRM2 450 aaPredicted RBP17.46■□□□□ 0.39
HMGN1-211ENST00000471260 SNED1Q8TER0 1413 aa17.46■□□□□ 0.39
HMGN1-211ENST00000471260 TRIM28Q13263 835 aaKnown RBP17.45■□□□□ 0.38
HMGN1-211ENST00000471260 OLFM4Q6UX06 510 aa17.45■□□□□ 0.38
HMGN1-211ENST00000471260 IQCA1LA6NCM1 817 aa17.44■□□□□ 0.38
HMGN1-211ENST00000471260 PPEF1O14829 653 aaPredicted RBP17.44■□□□□ 0.38
HMGN1-211ENST00000471260 BBOX1O75936 387 aa17.44■□□□□ 0.38
HMGN1-211ENST00000471260 DDNO94850 711 aaPredicted RBP17.44■□□□□ 0.38
HMGN1-211ENST00000471260 C3orf67Q6ZVT6 689 aa17.44■□□□□ 0.38
HMGN1-211ENST00000471260 L3MBTL3Q96JM7 780 aaPredicted RBP17.44■□□□□ 0.38
HMGN1-211ENST00000471260 ISCA1Q9BUE6 129 aa17.44■□□□□ 0.38
HMGN1-211ENST00000471260 VPS33BQ9H267 617 aa17.44■□□□□ 0.38
HMGN1-211ENST00000471260 MRS2Q9HD23 443 aa17.44■□□□□ 0.38
HMGN1-211ENST00000471260 CEP350Q5VT06 3117 aa17.44■□□□□ 0.38
HMGN1-211ENST00000471260 FZD9O00144 591 aa17.43■□□□□ 0.38
HMGN1-211ENST00000471260 GOLGA2Q08379 1002 aa17.43■□□□□ 0.38
HMGN1-211ENST00000471260 CCDC30Q5VVM6 783 aa17.43■□□□□ 0.38
HMGN1-211ENST00000471260 WWC1Q8IX03 1113 aa17.43■□□□□ 0.38
HMGN1-211ENST00000471260 JDP2Q8WYK2 163 aa17.43■□□□□ 0.38
HMGN1-211ENST00000471260 ATP6V0A2Q9Y487 856 aa17.43■□□□□ 0.38
HMGN1-211ENST00000471260 ELL2O00472 640 aaPredicted RBP17.42■□□□□ 0.38
HMGN1-211ENST00000471260 HCLS1P14317 486 aaPredicted RBP17.42■□□□□ 0.38
HMGN1-211ENST00000471260 DDX46Q7L014 1031 aaKnown RBP17.42■□□□□ 0.38
HMGN1-211ENST00000471260 RIC3Q7Z5B4 369 aa17.42■□□□□ 0.38
HMGN1-211ENST00000471260 C8orf58Q8NAV2 365 aa17.42■□□□□ 0.38
HMGN1-211ENST00000471260 IL16Q14005 1332 aa17.42■□□□□ 0.38
HMGN1-211ENST00000471260 TMC4Q7Z404 712 aa17.41■□□□□ 0.38
HMGN1-211ENST00000471260 SP8Q8IXZ3 490 aa17.41■□□□□ 0.38
HMGN1-211ENST00000471260 ABCC4O15439 1325 aa17.41■□□□□ 0.38
HMGN1-211ENST00000471260 DDX58O95786 925 aaKnown RBP17.4■□□□□ 0.38
HMGN1-211ENST00000471260 HSP90B1P14625 803 aaKnown RBP17.4■□□□□ 0.38
HMGN1-211ENST00000471260 DNAJC5GQ8N7S2 189 aa17.4■□□□□ 0.38
HMGN1-211ENST00000471260 SUPT20HQ8NEM7 779 aa17.4■□□□□ 0.38
HMGN1-211ENST00000471260 ATP5J2-PTCD1G3V325 749 aa17.39■□□□□ 0.37
HMGN1-211ENST00000471260 GRAPQ13588 217 aa17.39■□□□□ 0.37
HMGN1-211ENST00000471260 SF3B3Q15393 1217 aaKnown RBP17.39■□□□□ 0.37
HMGN1-211ENST00000471260 MIER1Q8N108 512 aa17.39■□□□□ 0.37
HMGN1-211ENST00000471260 GPC2Q8N158 579 aa17.39■□□□□ 0.37
HMGN1-211ENST00000471260 GRAPLQ8TC17 118 aaPredicted RBP17.39■□□□□ 0.37
HMGN1-211ENST00000471260 PHAXQ9H814 394 aaKnown RBP17.39■□□□□ 0.37
HMGN1-211ENST00000471260 SCN4AP35499 1836 aa17.39■□□□□ 0.37
HMGN1-211ENST00000471260 EIF6P56537 245 aaKnown RBP17.38■□□□□ 0.37
HMGN1-211ENST00000471260 LARGE2Q8N3Y3 721 aa17.38■□□□□ 0.37
HMGN1-211ENST00000471260 ZBTB38Q8NAP3 1195 aaPredicted RBP17.38■□□□□ 0.37
HMGN1-211ENST00000471260 CCDC191Q8NCU4 936 aa17.38■□□□□ 0.37
HMGN1-211ENST00000471260 FAM89AQ96GI7 184 aa17.38■□□□□ 0.37
HMGN1-211ENST00000471260 RTFDC1Q9BY42 306 aaPredicted RBP17.38■□□□□ 0.37
HMGN1-211ENST00000471260 ZNF541Q9H0D2 1346 aa17.38■□□□□ 0.37
HMGN1-211ENST00000471260 TCERG1O14776 1098 aaKnown RBP17.37■□□□□ 0.37
HMGN1-211ENST00000471260 CHADLQ6NUI6 762 aa17.37■□□□□ 0.37
HMGN1-211ENST00000471260 WDR63Q8IWG1 891 aa17.37■□□□□ 0.37
HMGN1-211ENST00000471260 TSPYL6Q8N831 410 aa17.37■□□□□ 0.37
HMGN1-211ENST00000471260 STK31Q9BXU1 1019 aa17.37■□□□□ 0.37
HMGN1-211ENST00000471260 TAF1DQ9H5J8 278 aaPredicted RBP17.37■□□□□ 0.37
HMGN1-211ENST00000471260 HACL1Q9UJ83 578 aa17.37■□□□□ 0.37
HMGN1-211ENST00000471260 LAMB2P55268 1798 aa17.36■□□□□ 0.37
HMGN1-211ENST00000471260 PNMA8AQ86V59 439 aaPredicted RBP17.36■□□□□ 0.37
HMGN1-211ENST00000471260 LDHDQ86WU2 507 aa17.36■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 118.4 ms