RNA–Protein interactions for RNA: ENST00000471181.6

BRCA1-210, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 5,936 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-210ENST00000471181 STMN2Q93045 179 aa7.88□□□□□ -1.15
BRCA1-210ENST00000471181 TTC14Q96N46 770 aa7.88□□□□□ -1.15
BRCA1-210ENST00000471181 SUDS3Q9H7L9 328 aaPredicted RBP7.88□□□□□ -1.15
BRCA1-210ENST00000471181 TTC12Q9H892 705 aaPredicted RBP7.88□□□□□ -1.15
BRCA1-210ENST00000471181 GPRASP1Q5JY77 1395 aa7.87□□□□□ -1.15
BRCA1-210ENST00000471181 PLCB3Q01970 1234 aa7.87□□□□□ -1.15
BRCA1-210ENST00000471181 EXOSC9Q06265 439 aaKnown RBP7.87□□□□□ -1.15
BRCA1-210ENST00000471181 LRRC43Q8N309 656 aa7.87□□□□□ -1.15
BRCA1-210ENST00000471181 CCDC110Q8TBZ0 833 aa7.87□□□□□ -1.15
BRCA1-210ENST00000471181 KIAA1524Q8TCG1 905 aa7.87□□□□□ -1.15
BRCA1-210ENST00000471181 FAM212AQ96EL1 285 aa7.87□□□□□ -1.15
BRCA1-210ENST00000471181 SRCIN1Q9C0H9 1055 aa7.87□□□□□ -1.15
BRCA1-210ENST00000471181 IL1RAPL2Q9NP60 686 aa7.87□□□□□ -1.15
BRCA1-210ENST00000471181 RABGAP1Q9Y3P9 1069 aa7.87□□□□□ -1.15
BRCA1-210ENST00000471181 TBCAO75347 108 aaKnown RBP7.87□□□□□ -1.15
BRCA1-210ENST00000471181 CCDC117Q8IWD4 279 aaPredicted RBP7.87□□□□□ -1.15
BRCA1-210ENST00000471181 CACYBPQ9HB71 228 aaKnown RBP7.87□□□□□ -1.15
BRCA1-210ENST00000471181 PPME1Q9Y570 386 aa7.87□□□□□ -1.15
BRCA1-210ENST00000471181 SLC12A7Q9Y666 1083 aa7.87□□□□□ -1.15
BRCA1-210ENST00000471181 A0A087WZG4 1122 aa7.87□□□□□ -1.15
BRCA1-210ENST00000471181 AMPD3Q01432 767 aa7.87□□□□□ -1.15
BRCA1-210ENST00000471181 UAP1Q16222 522 aaPredicted RBP7.87□□□□□ -1.15
BRCA1-210ENST00000471181 CAVIN4Q5BKX8 364 aa7.87□□□□□ -1.15
BRCA1-210ENST00000471181 ZSCAN30Q86W11 494 aa7.87□□□□□ -1.15
BRCA1-210ENST00000471181 VPS52Q8N1B4 723 aa7.87□□□□□ -1.15
BRCA1-210ENST00000471181 C8orf76Q96K31 380 aa7.87□□□□□ -1.15
BRCA1-210ENST00000471181 PPFIBP2Q8ND30 876 aa7.87□□□□□ -1.15
BRCA1-210ENST00000471181 PANK2Q9BZ23 570 aa7.87□□□□□ -1.15
BRCA1-210ENST00000471181 ATP2A1O14983 1001 aa7.87□□□□□ -1.15
BRCA1-210ENST00000471181 SETSIPP0DME0 302 aa7.87□□□□□ -1.15
BRCA1-210ENST00000471181 CCT4P50991 539 aaKnown RBP7.87□□□□□ -1.15
BRCA1-210ENST00000471181 IRX3P78415 501 aaPredicted RBP7.87□□□□□ -1.15
BRCA1-210ENST00000471181 AAMPQ13685 434 aa7.87□□□□□ -1.15
BRCA1-210ENST00000471181 CCDC183Q5T5S1 534 aa7.87□□□□□ -1.15
BRCA1-210ENST00000471181 RSRC1Q96IZ7 334 aaKnown RBP7.87□□□□□ -1.15
BRCA1-210ENST00000471181 PLVAPQ9BX97 442 aa7.87□□□□□ -1.15
BRCA1-210ENST00000471181 NUF2Q9BZD4 464 aa7.87□□□□□ -1.15
BRCA1-210ENST00000471181 STMN1P16949 149 aa7.86□□□□□ -1.15
BRCA1-210ENST00000471181 PRPF40BQ6NWY9 871 aaKnown RBP7.86□□□□□ -1.15
BRCA1-210ENST00000471181 PPP1R21Q6ZMI0 780 aa7.86□□□□□ -1.15
BRCA1-210ENST00000471181 MPHOSPH6Q99547 160 aaKnown RBP7.86□□□□□ -1.15
BRCA1-210ENST00000471181 MIA2Q96PC5 1412 aa7.86□□□□□ -1.15
BRCA1-210ENST00000471181 BICDL2A1A5D9 508 aa7.86□□□□□ -1.15
BRCA1-210ENST00000471181 SRGAP3O43295 1099 aa7.86□□□□□ -1.15
BRCA1-210ENST00000471181 ALDH3A1P30838 453 aa7.86□□□□□ -1.15
BRCA1-210ENST00000471181 HSPA1LP34931 641 aa7.86□□□□□ -1.15
BRCA1-210ENST00000471181 PPP2R5CQ13362 524 aa7.86□□□□□ -1.15
BRCA1-210ENST00000471181 SELENOOQ9BVL4 669 aa7.86□□□□□ -1.15
BRCA1-210ENST00000471181 PRKRIP1Q9H875 184 aaPredicted RBP7.86□□□□□ -1.15
BRCA1-210ENST00000471181 FANCD2Q9BXW9 1451 aa7.86□□□□□ -1.15
BRCA1-210ENST00000471181 USP47Q96K76 1375 aa7.86□□□□□ -1.15
BRCA1-210ENST00000471181 GNG11P61952 73 aa7.86□□□□□ -1.15
BRCA1-210ENST00000471181 NAPBQ9H115 298 aa7.86□□□□□ -1.15
BRCA1-210ENST00000471181 CCDC172P0C7W6 258 aa7.86□□□□□ -1.15
BRCA1-210ENST00000471181 PIP4K2BP78356 416 aa7.86□□□□□ -1.15
BRCA1-210ENST00000471181 CCDC25Q86WR0 208 aa7.86□□□□□ -1.15
BRCA1-210ENST00000471181 FCHSD2O94868 740 aa7.85□□□□□ -1.15
BRCA1-210ENST00000471181 AKNAD1Q5T1N1 836 aa7.85□□□□□ -1.15
BRCA1-210ENST00000471181 PDCD7Q8N8D1 485 aaKnown RBP7.85□□□□□ -1.15
BRCA1-210ENST00000471181 SPAG5Q96R06 1193 aa7.85□□□□□ -1.15
BRCA1-210ENST00000471181 EXOC1Q9NV70 894 aa7.85□□□□□ -1.15
BRCA1-210ENST00000471181 WDR46O15213 610 aaKnown RBP7.85□□□□□ -1.15
BRCA1-210ENST00000471181 GAS8O95995 478 aa7.85□□□□□ -1.15
BRCA1-210ENST00000471181 ZNF853P0CG23 659 aa7.85□□□□□ -1.15
BRCA1-210ENST00000471181 TTF1Q15361 905 aaPredicted RBP7.85□□□□□ -1.15
BRCA1-210ENST00000471181 TTC31Q49AM3 519 aaPredicted RBP7.85□□□□□ -1.15
BRCA1-210ENST00000471181 DNAJC21Q5F1R6 531 aaKnown RBP7.85□□□□□ -1.15
BRCA1-210ENST00000471181 CCDC114Q96M63 670 aa7.85□□□□□ -1.15
BRCA1-210ENST00000471181 PRKAR2BP31323 418 aa7.85□□□□□ -1.15
BRCA1-210ENST00000471181 GABPAQ06546 454 aa7.85□□□□□ -1.15
BRCA1-210ENST00000471181 FSIP1Q8NA03 581 aa7.85□□□□□ -1.15
BRCA1-210ENST00000471181 TRIM47Q96LD4 638 aa7.85□□□□□ -1.15
BRCA1-210ENST00000471181 TCP11L1Q9NUJ3 509 aa7.85□□□□□ -1.15
BRCA1-210ENST00000471181 MGEA5O60502 916 aa7.85□□□□□ -1.15
BRCA1-210ENST00000471181 IRX5P78411 483 aaPredicted RBP7.85□□□□□ -1.15
BRCA1-210ENST00000471181 TRAF3IP1Q8TDR0 691 aaPredicted RBP7.85□□□□□ -1.15
BRCA1-210ENST00000471181 VCX3BQ9H321 246 aa7.85□□□□□ -1.15
BRCA1-210ENST00000471181 SPG7Q9UQ90 795 aa7.85□□□□□ -1.15
BRCA1-210ENST00000471181 CARMIL1Q5VZK9 1371 aa7.85□□□□□ -1.15
BRCA1-210ENST00000471181 GOLGA6L9A6NEM1 432 aa7.85□□□□□ -1.15
BRCA1-210ENST00000471181 AKR1B10O60218 316 aa7.85□□□□□ -1.15
BRCA1-210ENST00000471181 OPA1O60313 960 aa7.85□□□□□ -1.15
BRCA1-210ENST00000471181 IVLP07476 585 aa7.85□□□□□ -1.15
BRCA1-210ENST00000471181 MTHFSP49914 203 aa7.85□□□□□ -1.15
BRCA1-210ENST00000471181 KANK4Q5T7N3 995 aaPredicted RBP7.85□□□□□ -1.15
BRCA1-210ENST00000471181 NAA16Q6N069 864 aaPredicted RBP7.85□□□□□ -1.15
BRCA1-210ENST00000471181 ATF7IPQ6VMQ6 1270 aa7.85□□□□□ -1.15
BRCA1-210ENST00000471181 LCA5Q86VQ0 697 aa7.85□□□□□ -1.15
BRCA1-210ENST00000471181 TSR2Q969E8 191 aaKnown RBP7.85□□□□□ -1.15
BRCA1-210ENST00000471181 SDAD1Q9NVU7 687 aaKnown RBP eCLIP7.85□□□□□ -1.15
BRCA1-210ENST00000471181 ABCA10Q8WWZ4 1543 aa7.84□□□□□ -1.15
BRCA1-210ENST00000471181 FAM13AO94988 1023 aa7.84□□□□□ -1.15
BRCA1-210ENST00000471181 ATP2A2P16615 1042 aaKnown RBP7.84□□□□□ -1.15
BRCA1-210ENST00000471181 LACTBP83111 547 aaPredicted RBP7.84□□□□□ -1.15
BRCA1-210ENST00000471181 MAP7Q14244 749 aa7.84□□□□□ -1.15
BRCA1-210ENST00000471181 DIXDC1Q155Q3 683 aa7.84□□□□□ -1.15
BRCA1-210ENST00000471181 CPLX4Q7Z7G2 160 aa7.84□□□□□ -1.15
BRCA1-210ENST00000471181 EHBP1Q8NDI1 1231 aa7.84□□□□□ -1.15
BRCA1-210ENST00000471181 MRRFQ96E11 262 aaKnown RBP7.84□□□□□ -1.15
BRCA1-210ENST00000471181 AFG3L2Q9Y4W6 797 aa7.84□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 87.1 ms